RNA–Protein interactions for RNA: ENST00000587457.1

PPP6R1-204, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 2,389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-204ENST00000587457 TDRD9Q8NDG6 1382 aaKnown RBP23.48■■□□□ 1.35
PPP6R1-204ENST00000587457 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
PPP6R1-204ENST00000587457 GAPVD1Q14C86 1478 aa23.38■■□□□ 1.33
PPP6R1-204ENST00000587457 KANK4Q5T7N3 995 aaPredicted RBP23.37■■□□□ 1.33
PPP6R1-204ENST00000587457 ANP32EQ9BTT0 268 aa23.36■■□□□ 1.33
PPP6R1-204ENST00000587457 CUL7Q14999 1698 aa23.36■■□□□ 1.33
PPP6R1-204ENST00000587457 ABCA5Q8WWZ7 1642 aa23.36■■□□□ 1.33
PPP6R1-204ENST00000587457 BCL11AQ9H165 835 aa23.36■■□□□ 1.33
PPP6R1-204ENST00000587457 MRC2Q9UBG0 1479 aa23.35■■□□□ 1.33
PPP6R1-204ENST00000587457 HNRNPUL2Q1KMD3 747 aaKnown RBP23.33■■□□□ 1.32
PPP6R1-204ENST00000587457 P3H3Q8IVL6 736 aa23.33■■□□□ 1.32
PPP6R1-204ENST00000587457 SUPT16HQ9Y5B9 1047 aaKnown RBP23.33■■□□□ 1.32
PPP6R1-204ENST00000587457 TARBP1Q13395 1621 aaKnown RBP23.31■■□□□ 1.32
PPP6R1-204ENST00000587457 CLSPNQ9HAW4 1339 aa23.27■■□□□ 1.32
PPP6R1-204ENST00000587457 TSHZ2Q9NRE2 1034 aa23.26■■□□□ 1.31
PPP6R1-204ENST00000587457 AQRO60306 1485 aaKnown RBP eCLIP23.23■■□□□ 1.313e-7■■■■□ 21.5
PPP6R1-204ENST00000587457 FHOD3Q2V2M9 1422 aa23.22■■□□□ 1.31
PPP6R1-204ENST00000587457 FHAD1B1AJZ9 1412 aa23.18■■□□□ 1.3
PPP6R1-204ENST00000587457 ERCC6Q03468 1493 aa23.17■■□□□ 1.3
PPP6R1-204ENST00000587457 CTTNBP2Q8WZ74 1663 aa23.17■■□□□ 1.3
PPP6R1-204ENST00000587457 WDR62O43379 1518 aa23.17■■□□□ 1.3
PPP6R1-204ENST00000587457 ATP1B4Q9UN42 357 aaPredicted RBP23.15■■□□□ 1.3
PPP6R1-204ENST00000587457 EFCAB5A4FU69 1503 aa23.15■■□□□ 1.3
PPP6R1-204ENST00000587457 TIAM1Q13009 1591 aa23.12■■□□□ 1.29
PPP6R1-204ENST00000587457 ZNF608Q9ULD9 1512 aaPredicted RBP23.12■■□□□ 1.29
PPP6R1-204ENST00000587457 IFT140Q96RY7 1462 aa23.12■■□□□ 1.29
PPP6R1-204ENST00000587457 PCF11O94913 1555 aaKnown RBP23.12■■□□□ 1.29
PPP6R1-204ENST00000587457 MAP3K1Q13233 1512 aa23.1■■□□□ 1.29
PPP6R1-204ENST00000587457 PBRM1Q86U86 1689 aa23.1■■□□□ 1.29
PPP6R1-204ENST00000587457 GRIN2BQ13224 1484 aa23.09■■□□□ 1.29
PPP6R1-204ENST00000587457 RRBP1Q9P2E9 1410 aaKnown RBP23.08■■□□□ 1.29
PPP6R1-204ENST00000587457 LRRC9Q6ZRR7 1453 aa23.06■■□□□ 1.28
PPP6R1-204ENST00000587457 ADAMTS12P58397 1594 aa23.04■■□□□ 1.28
PPP6R1-204ENST00000587457 CASKIN1Q8WXD9 1431 aa23.04■■□□□ 1.28
PPP6R1-204ENST00000587457 CCNB3Q8WWL7 1395 aa23.03■■□□□ 1.28
PPP6R1-204ENST00000587457 FYCO1Q9BQS8 1478 aa23.03■■□□□ 1.28
PPP6R1-204ENST00000587457 FMN1Q68DA7 1419 aa23.02■■□□□ 1.28
PPP6R1-204ENST00000587457 SAMD9Q5K651 1589 aa23.01■■□□□ 1.27
PPP6R1-204ENST00000587457 THOC2Q8NI27 1593 aaKnown RBP22.99■■□□□ 1.27
PPP6R1-204ENST00000587457 CFAP43Q8NDM7 1665 aa22.97■■□□□ 1.27
PPP6R1-204ENST00000587457 PHLDB1Q86UU1 1377 aa22.96■■□□□ 1.27
PPP6R1-204ENST00000587457 SNAPC4Q5SXM2 1469 aa22.96■■□□□ 1.27
PPP6R1-204ENST00000587457 ITGAEP38570 1179 aa22.96■■□□□ 1.27
PPP6R1-204ENST00000587457 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
PPP6R1-204ENST00000587457 IQGAP2Q13576 1575 aa22.91■■□□□ 1.26
PPP6R1-204ENST00000587457 FAM50AQ14320 339 aaKnown RBP22.85■■□□□ 1.25
PPP6R1-204ENST00000587457 GRIN2AQ12879 1464 aa22.83■■□□□ 1.25
PPP6R1-204ENST00000587457 MTUS2Q5JR59 1369 aa22.82■■□□□ 1.24
PPP6R1-204ENST00000587457 BCANQ96GW7 911 aa22.81■■□□□ 1.24
PPP6R1-204ENST00000587457 DHX57Q6P158 1386 aaKnown RBP22.81■■□□□ 1.24
PPP6R1-204ENST00000587457 CHMP7Q8WUX9 453 aaPredicted RBP22.8■■□□□ 1.24
PPP6R1-204ENST00000587457 KIAA0586Q9BVV6 1533 aa22.8■■□□□ 1.24
PPP6R1-204ENST00000587457 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
PPP6R1-204ENST00000587457 FBLN2P98095 1184 aa22.79■■□□□ 1.24
PPP6R1-204ENST00000587457 UGGT2Q9NYU1 1516 aa22.78■■□□□ 1.24
PPP6R1-204ENST00000587457 LRRIQ1Q96JM4 1722 aa22.77■■□□□ 1.24
PPP6R1-204ENST00000587457 SYNJ2O15056 1496 aa22.74■■□□□ 1.23
PPP6R1-204ENST00000587457 ARID3CA6NKF2 412 aa22.72■■□□□ 1.23
PPP6R1-204ENST00000587457 DISP1Q96F81 1524 aa22.72■■□□□ 1.23
PPP6R1-204ENST00000587457 RBM19Q9Y4C8 960 aaKnown RBP22.71■■□□□ 1.23
PPP6R1-204ENST00000587457 RAB3GAP2Q9H2M9 1393 aa22.71■■□□□ 1.23
PPP6R1-204ENST00000587457 FKBP8Q14318 412 aa22.7■■□□□ 1.22
PPP6R1-204ENST00000587457 FGD6Q6ZV73 1430 aa22.7■■□□□ 1.22
PPP6R1-204ENST00000587457 KCNH8Q96L42 1107 aa22.69■■□□□ 1.22
PPP6R1-204ENST00000587457 NCOA2Q15596 1464 aa22.69■■□□□ 1.22
PPP6R1-204ENST00000587457 CCDC18Q5T9S5 1454 aa22.69■■□□□ 1.22
PPP6R1-204ENST00000587457 HECW1Q76N89 1606 aa22.69■■□□□ 1.22
PPP6R1-204ENST00000587457 CEP170Q5SW79 1584 aa22.68■■□□□ 1.22
PPP6R1-204ENST00000587457 MAGI3Q5TCQ9 1506 aa22.68■■□□□ 1.22
PPP6R1-204ENST00000587457 KIAA0556O60303 1618 aa22.67■■□□□ 1.22
PPP6R1-204ENST00000587457 EPRSP07814 1512 aaKnown RBP22.67■■□□□ 1.22
PPP6R1-204ENST00000587457 EHBP1L1Q8N3D4 1523 aa22.67■■□□□ 1.22
PPP6R1-204ENST00000587457 SETD5Q9C0A6 1442 aa22.66■■□□□ 1.22
PPP6R1-204ENST00000587457 CDK13Q14004 1512 aaKnown RBP22.65■■□□□ 1.22
PPP6R1-204ENST00000587457 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.64■■□□□ 1.22
PPP6R1-204ENST00000587457 MYOM3Q5VTT5 1437 aa22.62■■□□□ 1.21
PPP6R1-204ENST00000587457 NUP160Q12769 1436 aa22.61■■□□□ 1.21
PPP6R1-204ENST00000587457 SUPT6HQ7KZ85 1726 aaKnown RBP22.61■■□□□ 1.21
PPP6R1-204ENST00000587457 JPH4Q96JJ6 628 aa22.58■■□□□ 1.21
PPP6R1-204ENST00000587457 ARHGEF11O15085 1522 aa22.57■■□□□ 1.2
PPP6R1-204ENST00000587457 NUP153P49790 1475 aaKnown RBP22.54■■□□□ 1.2
PPP6R1-204ENST00000587457 PTPRKQ15262 1439 aa22.54■■□□□ 1.2
PPP6R1-204ENST00000587457 MSH5O43196 834 aa22.52■■□□□ 1.2
PPP6R1-204ENST00000587457 RAPGEF6Q8TEU7 1601 aa22.51■■□□□ 1.19
PPP6R1-204ENST00000587457 CARMIL2Q6F5E8 1435 aa22.5■■□□□ 1.19
PPP6R1-204ENST00000587457 MAPKBP1O60336 1514 aa22.5■■□□□ 1.19
PPP6R1-204ENST00000587457 NEFLP07196 543 aa22.49■■□□□ 1.19
PPP6R1-204ENST00000587457 PLB1Q6P1J6 1458 aa22.49■■□□□ 1.19
PPP6R1-204ENST00000587457 PTPN23Q9H3S7 1636 aa22.48■■□□□ 1.19
PPP6R1-204ENST00000587457 PRKCSHP14314 528 aaPredicted RBP22.47■■□□□ 1.19
PPP6R1-204ENST00000587457 TCOF1Q13428 1488 aaKnown RBP22.43■■□□□ 1.18
PPP6R1-204ENST00000587457 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
PPP6R1-204ENST00000587457 HFM1A2PYH4 1435 aa22.42■■□□□ 1.18
PPP6R1-204ENST00000587457 MIA2Q96PC5 1412 aa22.4■■□□□ 1.18
PPP6R1-204ENST00000587457 CHIC2Q9UKJ5 165 aa22.4■■□□□ 1.18
PPP6R1-204ENST00000587457 PRG4Q92954 1404 aaPredicted RBP22.39■■□□□ 1.18
PPP6R1-204ENST00000587457 NAIPQ13075 1403 aa22.38■■□□□ 1.17
PPP6R1-204ENST00000587457 SIN3AQ96ST3 1273 aa22.38■■□□□ 1.17
PPP6R1-204ENST00000587457 RRP7BPQ9NSQ0 103 aa22.36■■□□□ 1.17
PPP6R1-204ENST00000587457 TROQ12816 1431 aaPredicted RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms