RNA–Protein interactions for RNA: ENST00000586737.5

ERCC2-208, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-208ENST00000586737 RUSC2Q8N2Y8 1516 aa22.33■■□□□ 1.17
ERCC2-208ENST00000586737 CARMIL1Q5VZK9 1371 aa22.33■■□□□ 1.17
ERCC2-208ENST00000586737 KIAA0586Q9BVV6 1533 aa22.31■■□□□ 1.16
ERCC2-208ENST00000586737 CUL7Q14999 1698 aa22.28■■□□□ 1.16
ERCC2-208ENST00000586737 RAPGEF2Q9Y4G8 1499 aa22.11■■□□□ 1.13
ERCC2-208ENST00000586737 PTPRGP23470 1445 aa22.06■■□□□ 1.12
ERCC2-208ENST00000586737 IQGAP2Q13576 1575 aa22.04■■□□□ 1.12
ERCC2-208ENST00000586737 ADCY10Q96PN6 1610 aa22.03■■□□□ 1.12
ERCC2-208ENST00000586737 TNIKQ9UKE5 1360 aa22.03■■□□□ 1.12
ERCC2-208ENST00000586737 CARMIL2Q6F5E8 1435 aa22.03■■□□□ 1.12
ERCC2-208ENST00000586737 DISP1Q96F81 1524 aa22.01■■□□□ 1.11
ERCC2-208ENST00000586737 NPM1P06748 294 aaKnown RBP eCLIP22.01■■□□□ 1.11
ERCC2-208ENST00000586737 PRXQ9BXM0 1461 aa22.01■■□□□ 1.11
ERCC2-208ENST00000586737 MAPKBP1O60336 1514 aa21.98■■□□□ 1.11
ERCC2-208ENST00000586737 UGGT2Q9NYU1 1516 aa21.98■■□□□ 1.11
ERCC2-208ENST00000586737 TTBK1Q5TCY1 1321 aaPredicted RBP21.98■■□□□ 1.11
ERCC2-208ENST00000586737 ABCC10Q5T3U5 1492 aa21.96■■□□□ 1.11
ERCC2-208ENST00000586737 FAM69CQ0P6D2 419 aa21.94■■□□□ 1.1
ERCC2-208ENST00000586737 ABCC2Q92887 1545 aa21.9■■□□□ 1.1
ERCC2-208ENST00000586737 UHRF1BP1LA0JNW5 1464 aa21.9■■□□□ 1.1
ERCC2-208ENST00000586737 UACAQ9BZF9 1416 aa21.89■■□□□ 1.1
ERCC2-208ENST00000586737 CSRNP3Q8WYN3 585 aa21.88■■□□□ 1.09
ERCC2-208ENST00000586737 KIF13AQ9H1H9 1805 aa21.87■■□□□ 1.09
ERCC2-208ENST00000586737 KIAA0556O60303 1618 aa21.86■■□□□ 1.09
ERCC2-208ENST00000586737 DIP2BQ9P265 1576 aa21.86■■□□□ 1.09
ERCC2-208ENST00000586737 ASXL2Q76L83 1435 aa21.8■■□□□ 1.08
ERCC2-208ENST00000586737 KDM5BQ9UGL1 1544 aa21.8■■□□□ 1.08
ERCC2-208ENST00000586737 GOLGA3Q08378 1498 aa21.77■■□□□ 1.08
ERCC2-208ENST00000586737 EEA1Q15075 1411 aa21.77■■□□□ 1.08
ERCC2-208ENST00000586737 PLB1Q6P1J6 1458 aa21.77■■□□□ 1.07
ERCC2-208ENST00000586737 CTTNBP2Q8WZ74 1663 aa21.75■■□□□ 1.07
ERCC2-208ENST00000586737 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
ERCC2-208ENST00000586737 FAM9AQ8IZU1 332 aaPredicted RBP21.71■■□□□ 1.07
ERCC2-208ENST00000586737 ABCA8O94911 1581 aa21.69■■□□□ 1.06
ERCC2-208ENST00000586737 GLI2P10070 1586 aa21.69■■□□□ 1.06
ERCC2-208ENST00000586737 P3H3Q8IVL6 736 aa21.68■■□□□ 1.06
ERCC2-208ENST00000586737 EPRSP07814 1512 aaKnown RBP21.67■■□□□ 1.06
ERCC2-208ENST00000586737 ZCCHC11Q5TAX3 1644 aaKnown RBP21.65■■□□□ 1.06
ERCC2-208ENST00000586737 WDR7Q9Y4E6 1490 aa21.61■■□□□ 1.05
ERCC2-208ENST00000586737 SAMD9Q5K651 1589 aa21.59■■□□□ 1.05
ERCC2-208ENST00000586737 PPRC1Q5VV67 1664 aaKnown RBP21.56■■□□□ 1.04
ERCC2-208ENST00000586737 KDM6BO15054 1643 aa21.56■■□□□ 1.04
ERCC2-208ENST00000586737 ATP10BO94823 1461 aa21.55■■□□□ 1.04
ERCC2-208ENST00000586737 COL17A1Q9UMD9 1497 aaPredicted RBP21.55■■□□□ 1.04
ERCC2-208ENST00000586737 ARID3CA6NKF2 412 aa21.54■■□□□ 1.04
ERCC2-208ENST00000586737 KIF21BO75037 1637 aa21.54■■□□□ 1.04
ERCC2-208ENST00000586737 TSPOAP1O95153 1857 aa21.54■■□□□ 1.04
ERCC2-208ENST00000586737 RANGAP1P46060 587 aaPredicted RBP21.53■■□□□ 1.04
ERCC2-208ENST00000586737 MAP3K4Q9Y6R4 1608 aa21.52■■□□□ 1.04
ERCC2-208ENST00000586737 AEBP2Q6ZN18 517 aaPredicted RBP21.52■■□□□ 1.04
ERCC2-208ENST00000586737 KCNH8Q96L42 1107 aa21.52■■□□□ 1.04
ERCC2-208ENST00000586737 FHOD3Q2V2M9 1422 aa21.51■■□□□ 1.03
ERCC2-208ENST00000586737 CD109Q6YHK3 1445 aa21.46■■□□□ 1.03
ERCC2-208ENST00000586737 TEX14Q8IWB6 1497 aa21.46■■□□□ 1.03
ERCC2-208ENST00000586737 NUP153P49790 1475 aaKnown RBP21.45■■□□□ 1.03
ERCC2-208ENST00000586737 EHMT2Q96KQ7 1210 aa21.45■■□□□ 1.02
ERCC2-208ENST00000586737 MAGI3Q5TCQ9 1506 aa21.45■■□□□ 1.02
ERCC2-208ENST00000586737 KDM4FA0A1W2PPD8 638 aa21.42■■□□□ 1.02
ERCC2-208ENST00000586737 RAPGEF6Q8TEU7 1601 aa21.42■■□□□ 1.02
ERCC2-208ENST00000586737 UBTFP17480 764 aaKnown RBP21.41■■□□□ 1.02
ERCC2-208ENST00000586737 EFCAB5A4FU69 1503 aa21.4■■□□□ 1.02
ERCC2-208ENST00000586737 CFAP43Q8NDM7 1665 aa21.35■■□□□ 1.01
ERCC2-208ENST00000586737 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
ERCC2-208ENST00000586737 HNRNPUL2Q1KMD3 747 aaKnown RBP21.35■■□□□ 1.01
ERCC2-208ENST00000586737 ARHGAP35Q9NRY4 1499 aa21.33■■□□□ 1.01
ERCC2-208ENST00000586737 ABCA9Q8IUA7 1624 aa21.29■■□□□ 1
ERCC2-208ENST00000586737 PLEKHD1A6NEE1 506 aa21.29■■□□□ 1
ERCC2-208ENST00000586737 ARAP3Q8WWN8 1544 aa21.27■■□□□ 1
ERCC2-208ENST00000586737 PHLDB1Q86UU1 1377 aa21.24■□□□□ 0.99
ERCC2-208ENST00000586737 FMN1Q68DA7 1419 aa21.24■□□□□ 0.99
ERCC2-208ENST00000586737 CDK13Q14004 1512 aaKnown RBP21.23■□□□□ 0.99
ERCC2-208ENST00000586737 ADGRL1O94910 1474 aa21.21■□□□□ 0.99
ERCC2-208ENST00000586737 NEO1Q92859 1461 aa21.2■□□□□ 0.98
ERCC2-208ENST00000586737 RAPGEF3O95398 923 aa21.19■□□□□ 0.98
ERCC2-208ENST00000586737 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.17■□□□□ 0.98
ERCC2-208ENST00000586737 ATP1B4Q9UN42 357 aaPredicted RBP21.16■□□□□ 0.98
ERCC2-208ENST00000586737 HECW1Q76N89 1606 aa21.11■□□□□ 0.97
ERCC2-208ENST00000586737 TTC37Q6PGP7 1564 aa21.11■□□□□ 0.97
ERCC2-208ENST00000586737 AKNAQ7Z591 1439 aa21.11■□□□□ 0.97
ERCC2-208ENST00000586737 FANCAO15360 1455 aa21.1■□□□□ 0.97
ERCC2-208ENST00000586737 PLCH2O75038 1416 aa21.09■□□□□ 0.97
ERCC2-208ENST00000586737 FRMPD1Q5SYB0 1578 aa21.09■□□□□ 0.97
ERCC2-208ENST00000586737 CASKIN1Q8WXD9 1431 aa21.08■□□□□ 0.97
ERCC2-208ENST00000586737 CDK11AQ9UQ88 783 aaPredicted RBP21.08■□□□□ 0.97
ERCC2-208ENST00000586737 DENND4BO75064 1496 aaPredicted RBP21.07■□□□□ 0.96
ERCC2-208ENST00000586737 TROQ12816 1431 aaPredicted RBP21.06■□□□□ 0.96
ERCC2-208ENST00000586737 CLIP1P30622 1438 aa21.05■□□□□ 0.96
ERCC2-208ENST00000586737 PCF11O94913 1555 aaKnown RBP21.01■□□□□ 0.95
ERCC2-208ENST00000586737 KIF14Q15058 1648 aa20.99■□□□□ 0.95
ERCC2-208ENST00000586737 SCAPERQ9BY12 1400 aa20.98■□□□□ 0.95
ERCC2-208ENST00000586737 EFCAB2Q5VUJ9 269 aa20.98■□□□□ 0.95
ERCC2-208ENST00000586737 CCDC18Q5T9S5 1454 aa20.97■□□□□ 0.95
ERCC2-208ENST00000586737 LRRIQ1Q96JM4 1722 aa20.97■□□□□ 0.95
ERCC2-208ENST00000586737 CFAP74Q9C0B2 1584 aa20.96■□□□□ 0.95
ERCC2-208ENST00000586737 YEATS2Q9ULM3 1422 aa20.95■□□□□ 0.95
ERCC2-208ENST00000586737 FYCO1Q9BQS8 1478 aa20.95■□□□□ 0.94
ERCC2-208ENST00000586737 RICTORQ6R327 1708 aa20.95■□□□□ 0.94
ERCC2-208ENST00000586737 POGZQ7Z3K3 1410 aa20.95■□□□□ 0.94
ERCC2-208ENST00000586737 ZMYM4Q5VZL5 1548 aa20.94■□□□□ 0.94
ERCC2-208ENST00000586737 ARHGEF40Q8TER5 1519 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms