RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 JPH4Q96JJ6 628 aa32.53■■■□□ 2.8
TPM4-204ENST00000586499 PRG4Q92954 1404 aaPredicted RBP32.48■■■□□ 2.79
TPM4-204ENST00000586499 KIAA0586Q9BVV6 1533 aa32.41■■■□□ 2.78
TPM4-204ENST00000586499 TRHP20396 242 aaPredicted RBP32.36■■■□□ 2.77
TPM4-204ENST00000586499 RAPGEF2Q9Y4G8 1499 aa32.29■■■□□ 2.76
TPM4-204ENST00000586499 IQGAP2Q13576 1575 aa32.18■■■□□ 2.74
TPM4-204ENST00000586499 PRXQ9BXM0 1461 aa32.11■■■□□ 2.73
TPM4-204ENST00000586499 TTBK1Q5TCY1 1321 aaPredicted RBP32.1■■■□□ 2.73
TPM4-204ENST00000586499 CARMIL2Q6F5E8 1435 aa32.07■■■□□ 2.72
TPM4-204ENST00000586499 CSRNP3Q8WYN3 585 aa32.04■■■□□ 2.72
TPM4-204ENST00000586499 PTPRGP23470 1445 aa32.03■■■□□ 2.72
TPM4-204ENST00000586499 DISP1Q96F81 1524 aa32.01■■■□□ 2.72
TPM4-204ENST00000586499 TNIKQ9UKE5 1360 aa32.01■■■□□ 2.71
TPM4-204ENST00000586499 ADCY10Q96PN6 1610 aa32■■■□□ 2.71
TPM4-204ENST00000586499 CHIC1Q5VXU3 224 aa32■■■□□ 2.71
TPM4-204ENST00000586499 UGGT2Q9NYU1 1516 aa32■■■□□ 2.71
TPM4-204ENST00000586499 CTTNBP2Q8WZ74 1663 aa31.97■■■□□ 2.71
TPM4-204ENST00000586499 FAM9AQ8IZU1 332 aaPredicted RBP31.97■■■□□ 2.71
TPM4-204ENST00000586499 NPM1P06748 294 aaKnown RBP eCLIP31.96■■■□□ 2.71
TPM4-204ENST00000586499 EEA1Q15075 1411 aa31.91■■■□□ 2.7
TPM4-204ENST00000586499 KIAA0556O60303 1618 aa31.89■■■□□ 2.7
TPM4-204ENST00000586499 MAPKBP1O60336 1514 aa31.81■■■□□ 2.68
TPM4-204ENST00000586499 KIF13AQ9H1H9 1805 aa31.79■■■□□ 2.68
TPM4-204ENST00000586499 UACAQ9BZF9 1416 aa31.79■■■□□ 2.68
TPM4-204ENST00000586499 ABCC2Q92887 1545 aa31.76■■■□□ 2.68
TPM4-204ENST00000586499 FAM69CQ0P6D2 419 aa31.76■■■□□ 2.67
TPM4-204ENST00000586499 GOLGA3Q08378 1498 aa31.76■■■□□ 2.67
TPM4-204ENST00000586499 UHRF1BP1LA0JNW5 1464 aa31.75■■■□□ 2.67
TPM4-204ENST00000586499 ABCC10Q5T3U5 1492 aa31.74■■■□□ 2.67
TPM4-204ENST00000586499 P3H3Q8IVL6 736 aa31.7■■■□□ 2.67
TPM4-204ENST00000586499 DIP2BQ9P265 1576 aa31.68■■■□□ 2.66
TPM4-204ENST00000586499 PLB1Q6P1J6 1458 aa31.66■■■□□ 2.66
TPM4-204ENST00000586499 RANGAP1P46060 587 aaPredicted RBP31.64■■■□□ 2.66
TPM4-204ENST00000586499 EHMT2Q96KQ7 1210 aa31.64■■■□□ 2.66
TPM4-204ENST00000586499 KIF21BO75037 1637 aa31.64■■■□□ 2.65
TPM4-204ENST00000586499 ASXL2Q76L83 1435 aa31.62■■■□□ 2.65
TPM4-204ENST00000586499 KDM5BQ9UGL1 1544 aa31.62■■■□□ 2.65
TPM4-204ENST00000586499 ZCCHC11Q5TAX3 1644 aaKnown RBP31.57■■■□□ 2.64
TPM4-204ENST00000586499 ABCA8O94911 1581 aa31.56■■■□□ 2.64
TPM4-204ENST00000586499 SAMD9Q5K651 1589 aa31.56■■■□□ 2.64
TPM4-204ENST00000586499 UBTFP17480 764 aaKnown RBP31.48■■■□□ 2.63
TPM4-204ENST00000586499 TSPOAP1O95153 1857 aa31.48■■■□□ 2.63
TPM4-204ENST00000586499 ARID3CA6NKF2 412 aa31.44■■■□□ 2.62
TPM4-204ENST00000586499 EPRSP07814 1512 aaKnown RBP31.43■■■□□ 2.62
TPM4-204ENST00000586499 FHOD3Q2V2M9 1422 aa31.42■■■□□ 2.62
TPM4-204ENST00000586499 GLI2P10070 1586 aa31.42■■■□□ 2.62
TPM4-204ENST00000586499 WDR7Q9Y4E6 1490 aa31.38■■■□□ 2.61
TPM4-204ENST00000586499 ATP10BO94823 1461 aa31.34■■■□□ 2.61
TPM4-204ENST00000586499 KCNH8Q96L42 1107 aa31.34■■■□□ 2.61
TPM4-204ENST00000586499 RAPGEF6Q8TEU7 1601 aa31.33■■■□□ 2.61
TPM4-204ENST00000586499 EFCAB5A4FU69 1503 aa31.32■■■□□ 2.6
TPM4-204ENST00000586499 PPRC1Q5VV67 1664 aaKnown RBP31.31■■■□□ 2.6
TPM4-204ENST00000586499 MAP3K4Q9Y6R4 1608 aa31.28■■■□□ 2.6
TPM4-204ENST00000586499 KDM6BO15054 1643 aa31.25■■■□□ 2.59
TPM4-204ENST00000586499 NUP153P49790 1475 aaKnown RBP31.25■■■□□ 2.59
TPM4-204ENST00000586499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.23■■■□□ 2.59
TPM4-204ENST00000586499 HNRNPUL2Q1KMD3 747 aaKnown RBP31.23■■■□□ 2.59
TPM4-204ENST00000586499 ARHGAP35Q9NRY4 1499 aa31.21■■■□□ 2.59
TPM4-204ENST00000586499 CD109Q6YHK3 1445 aa31.15■■■□□ 2.58
TPM4-204ENST00000586499 TEX14Q8IWB6 1497 aa31.13■■■□□ 2.57
TPM4-204ENST00000586499 CFAP43Q8NDM7 1665 aa31.12■■■□□ 2.57
TPM4-204ENST00000586499 COL17A1Q9UMD9 1497 aaPredicted RBP31.11■■■□□ 2.57
TPM4-204ENST00000586499 ATP1B4Q9UN42 357 aaPredicted RBP31.07■■■□□ 2.56
TPM4-204ENST00000586499 MAGI3Q5TCQ9 1506 aa31.07■■■□□ 2.56
TPM4-204ENST00000586499 FMN1Q68DA7 1419 aa31.07■■■□□ 2.56
TPM4-204ENST00000586499 PLEKHD1A6NEE1 506 aa31.03■■■□□ 2.56
TPM4-204ENST00000586499 CDK13Q14004 1512 aaKnown RBP31.02■■■□□ 2.56
TPM4-204ENST00000586499 ABCA9Q8IUA7 1624 aa31.01■■■□□ 2.55
TPM4-204ENST00000586499 HECW1Q76N89 1606 aa30.94■■■□□ 2.54
TPM4-204ENST00000586499 AEBP2Q6ZN18 517 aaPredicted RBP30.93■■■□□ 2.54
TPM4-204ENST00000586499 CLIP1P30622 1438 aa30.9■■■□□ 2.54
TPM4-204ENST00000586499 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.85■■■□□ 2.531e-6■■□□□ 14.3
TPM4-204ENST00000586499 LRRIQ1Q96JM4 1722 aa30.84■■■□□ 2.53
TPM4-204ENST00000586499 PCF11O94913 1555 aaKnown RBP30.82■■■□□ 2.52
TPM4-204ENST00000586499 ARAP3Q8WWN8 1544 aa30.82■■■□□ 2.52
TPM4-204ENST00000586499 CASKIN1Q8WXD9 1431 aa30.81■■■□□ 2.52
TPM4-204ENST00000586499 TTC37Q6PGP7 1564 aa30.81■■■□□ 2.52
TPM4-204ENST00000586499 KDM4FA0A1W2PPD8 638 aa30.79■■■□□ 2.52
TPM4-204ENST00000586499 CDK11AQ9UQ88 783 aaPredicted RBP30.79■■■□□ 2.52
TPM4-204ENST00000586499 NEO1Q92859 1461 aa30.78■■■□□ 2.52
TPM4-204ENST00000586499 PHLDB1Q86UU1 1377 aa30.78■■■□□ 2.52
TPM4-204ENST00000586499 LOC105371045A0A1W2PR82 267 aa30.77■■■□□ 2.52
TPM4-204ENST00000586499 RAPGEF3O95398 923 aa30.75■■■□□ 2.51
TPM4-204ENST00000586499 TROQ12816 1431 aaPredicted RBP30.72■■■□□ 2.51
TPM4-204ENST00000586499 FANCAO15360 1455 aa30.7■■■□□ 2.51
TPM4-204ENST00000586499 KIF14Q15058 1648 aa30.7■■■□□ 2.51
TPM4-204ENST00000586499 CEP162Q5TB80 1403 aa30.7■■■□□ 2.5
TPM4-204ENST00000586499 FYCO1Q9BQS8 1478 aa30.7■■■□□ 2.5
TPM4-204ENST00000586499 CCDC18Q5T9S5 1454 aa30.69■■■□□ 2.5
TPM4-204ENST00000586499 AKNAQ7Z591 1439 aa30.68■■■□□ 2.5
TPM4-204ENST00000586499 PLCH2O75038 1416 aa30.66■■■□□ 2.5
TPM4-204ENST00000586499 ADGRL1O94910 1474 aa30.62■■■□□ 2.49
TPM4-204ENST00000586499 FRMPD1Q5SYB0 1578 aa30.62■■■□□ 2.49
TPM4-204ENST00000586499 CFAP74Q9C0B2 1584 aa30.61■■■□□ 2.49
TPM4-204ENST00000586499 DENND4BO75064 1496 aaPredicted RBP30.59■■■□□ 2.49
TPM4-204ENST00000586499 MYO5CQ9NQX4 1742 aa30.58■■■□□ 2.49
TPM4-204ENST00000586499 EFCAB2Q5VUJ9 269 aa30.56■■■□□ 2.48
TPM4-204ENST00000586499 RICTORQ6R327 1708 aa30.53■■■□□ 2.48
TPM4-204ENST00000586499 SCAPERQ9BY12 1400 aa30.52■■■□□ 2.48
TPM4-204ENST00000586499 ARHGAP5Q13017 1502 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms