RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 IGF1RP08069 1367 aa24.54■■□□□ 1.52
HDAC5-203ENST00000586339 JPH4Q96JJ6 628 aa24.52■■□□□ 1.52
HDAC5-203ENST00000586339 KIAA0586Q9BVV6 1533 aa24.48■■□□□ 1.51
HDAC5-203ENST00000586339 KIF13AQ9H1H9 1805 aa24.39■■□□□ 1.49
HDAC5-203ENST00000586339 CARMIL1Q5VZK9 1371 aa24.39■■□□□ 1.49
HDAC5-203ENST00000586339 ADCY10Q96PN6 1610 aa24.33■■□□□ 1.49
HDAC5-203ENST00000586339 MAPKBP1O60336 1514 aa24.31■■□□□ 1.48
HDAC5-203ENST00000586339 IQGAP2Q13576 1575 aa24.29■■□□□ 1.48
HDAC5-203ENST00000586339 NPM1P06748 294 aaKnown RBP eCLIP24.24■■□□□ 1.47
HDAC5-203ENST00000586339 CARMIL2Q6F5E8 1435 aa24.23■■□□□ 1.47
HDAC5-203ENST00000586339 ABCC10Q5T3U5 1492 aa24.23■■□□□ 1.47
HDAC5-203ENST00000586339 RAPGEF2Q9Y4G8 1499 aa24.21■■□□□ 1.47
HDAC5-203ENST00000586339 DIP2BQ9P265 1576 aa24.2■■□□□ 1.47
HDAC5-203ENST00000586339 PTPRGP23470 1445 aa24.18■■□□□ 1.46
HDAC5-203ENST00000586339 TNIKQ9UKE5 1360 aa24.17■■□□□ 1.46
HDAC5-203ENST00000586339 UGGT2Q9NYU1 1516 aa24.14■■□□□ 1.45
HDAC5-203ENST00000586339 DISP1Q96F81 1524 aa24.13■■□□□ 1.45
HDAC5-203ENST00000586339 CTTNBP2Q8WZ74 1663 aa24.11■■□□□ 1.45
HDAC5-203ENST00000586339 FAM69CQ0P6D2 419 aa24.11■■□□□ 1.45
HDAC5-203ENST00000586339 ABCC2Q92887 1545 aa24.1■■□□□ 1.45
HDAC5-203ENST00000586339 UHRF1BP1LA0JNW5 1464 aa24.09■■□□□ 1.45
HDAC5-203ENST00000586339 KIAA0556O60303 1618 aa24.07■■□□□ 1.44
HDAC5-203ENST00000586339 UACAQ9BZF9 1416 aa24.03■■□□□ 1.44
HDAC5-203ENST00000586339 TSPOAP1O95153 1857 aa24.03■■□□□ 1.44
HDAC5-203ENST00000586339 PLB1Q6P1J6 1458 aa24■■□□□ 1.43
HDAC5-203ENST00000586339 PRXQ9BXM0 1461 aa24■■□□□ 1.43
HDAC5-203ENST00000586339 TTBK1Q5TCY1 1321 aaPredicted RBP23.99■■□□□ 1.43
HDAC5-203ENST00000586339 GLI2P10070 1586 aa23.97■■□□□ 1.43
HDAC5-203ENST00000586339 ASXL2Q76L83 1435 aa23.97■■□□□ 1.43
HDAC5-203ENST00000586339 KDM5BQ9UGL1 1544 aa23.97■■□□□ 1.43
HDAC5-203ENST00000586339 KDM6BO15054 1643 aa23.95■■□□□ 1.43
HDAC5-203ENST00000586339 GOLGA3Q08378 1498 aa23.95■■□□□ 1.42
HDAC5-203ENST00000586339 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
HDAC5-203ENST00000586339 ZCCHC11Q5TAX3 1644 aaKnown RBP23.93■■□□□ 1.42
HDAC5-203ENST00000586339 PPRC1Q5VV67 1664 aaKnown RBP23.89■■□□□ 1.42
HDAC5-203ENST00000586339 EPRSP07814 1512 aaKnown RBP23.84■■□□□ 1.41
HDAC5-203ENST00000586339 MAP3K4Q9Y6R4 1608 aa23.84■■□□□ 1.41
HDAC5-203ENST00000586339 ABCA8O94911 1581 aa23.83■■□□□ 1.41
HDAC5-203ENST00000586339 EEA1Q15075 1411 aa23.8■■□□□ 1.4
HDAC5-203ENST00000586339 WDR7Q9Y4E6 1490 aa23.8■■□□□ 1.4
HDAC5-203ENST00000586339 CSRNP3Q8WYN3 585 aa23.76■■□□□ 1.39
HDAC5-203ENST00000586339 TEX14Q8IWB6 1497 aa23.75■■□□□ 1.39
HDAC5-203ENST00000586339 SAMD9Q5K651 1589 aa23.74■■□□□ 1.39
HDAC5-203ENST00000586339 CFAP43Q8NDM7 1665 aa23.72■■□□□ 1.39
HDAC5-203ENST00000586339 FAM9AQ8IZU1 332 aaPredicted RBP23.67■■□□□ 1.38
HDAC5-203ENST00000586339 MAGI3Q5TCQ9 1506 aa23.63■■□□□ 1.37
HDAC5-203ENST00000586339 KIF21BO75037 1637 aa23.62■■□□□ 1.37
HDAC5-203ENST00000586339 COL17A1Q9UMD9 1497 aaPredicted RBP23.62■■□□□ 1.37
HDAC5-203ENST00000586339 RAPGEF6Q8TEU7 1601 aa23.61■■□□□ 1.37
HDAC5-203ENST00000586339 CD109Q6YHK3 1445 aa23.59■■□□□ 1.37
HDAC5-203ENST00000586339 ATP10BO94823 1461 aa23.57■■□□□ 1.36
HDAC5-203ENST00000586339 P3H3Q8IVL6 736 aa23.56■■□□□ 1.36
HDAC5-203ENST00000586339 KDM4FA0A1W2PPD8 638 aa23.55■■□□□ 1.36
HDAC5-203ENST00000586339 KCNH8Q96L42 1107 aa23.53■■□□□ 1.36
HDAC5-203ENST00000586339 EFCAB5A4FU69 1503 aa23.53■■□□□ 1.36
HDAC5-203ENST00000586339 ABCA9Q8IUA7 1624 aa23.52■■□□□ 1.36
HDAC5-203ENST00000586339 FHOD3Q2V2M9 1422 aa23.48■■□□□ 1.35
HDAC5-203ENST00000586339 NUP153P49790 1475 aaKnown RBP23.48■■□□□ 1.35
HDAC5-203ENST00000586339 ADGRL1O94910 1474 aa23.47■■□□□ 1.35
HDAC5-203ENST00000586339 ARAP3Q8WWN8 1544 aa23.44■■□□□ 1.34
HDAC5-203ENST00000586339 ARID3CA6NKF2 412 aa23.44■■□□□ 1.34
HDAC5-203ENST00000586339 PHLDB1Q86UU1 1377 aa23.42■■□□□ 1.34
HDAC5-203ENST00000586339 RANGAP1P46060 587 aaPredicted RBP23.38■■□□□ 1.33
HDAC5-203ENST00000586339 NEO1Q92859 1461 aa23.37■■□□□ 1.33
HDAC5-203ENST00000586339 CHIC1Q5VXU3 224 aa23.37■■□□□ 1.33
HDAC5-203ENST00000586339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.35■■□□□ 1.33
HDAC5-203ENST00000586339 HNRNPUL2Q1KMD3 747 aaKnown RBP23.35■■□□□ 1.33
HDAC5-203ENST00000586339 PLEKHD1A6NEE1 506 aa23.29■■□□□ 1.32
HDAC5-203ENST00000586339 CFAP74Q9C0B2 1584 aa23.29■■□□□ 1.32
HDAC5-203ENST00000586339 FMN1Q68DA7 1419 aa23.27■■□□□ 1.32
HDAC5-203ENST00000586339 HECW1Q76N89 1606 aa23.27■■□□□ 1.32
HDAC5-203ENST00000586339 UBTFP17480 764 aaKnown RBP23.27■■□□□ 1.32
HDAC5-203ENST00000586339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.26■■□□□ 1.31
HDAC5-203ENST00000586339 FRMPD1Q5SYB0 1578 aa23.26■■□□□ 1.31
HDAC5-203ENST00000586339 ARHGAP35Q9NRY4 1499 aa23.25■■□□□ 1.31
HDAC5-203ENST00000586339 CDK13Q14004 1512 aaKnown RBP23.24■■□□□ 1.31
HDAC5-203ENST00000586339 TTC37Q6PGP7 1564 aa23.24■■□□□ 1.31
HDAC5-203ENST00000586339 RICTORQ6R327 1708 aa23.22■■□□□ 1.31
HDAC5-203ENST00000586339 FANCAO15360 1455 aa23.19■■□□□ 1.3
HDAC5-203ENST00000586339 RAPGEF3O95398 923 aa23.18■■□□□ 1.3
HDAC5-203ENST00000586339 ARHGEF40Q8TER5 1519 aa23.17■■□□□ 1.3
HDAC5-203ENST00000586339 DENND4BO75064 1496 aaPredicted RBP23.17■■□□□ 1.3
HDAC5-203ENST00000586339 AKNAQ7Z591 1439 aa23.16■■□□□ 1.3
HDAC5-203ENST00000586339 EHMT2Q96KQ7 1210 aa23.15■■□□□ 1.3
HDAC5-203ENST00000586339 ADAMTSL3P82987 1691 aa23.15■■□□□ 1.3
HDAC5-203ENST00000586339 HECW2Q9P2P5 1572 aa23.14■■□□□ 1.29
HDAC5-203ENST00000586339 MYO5CQ9NQX4 1742 aa23.13■■□□□ 1.29
HDAC5-203ENST00000586339 ZMYM4Q5VZL5 1548 aa23.13■■□□□ 1.29
HDAC5-203ENST00000586339 BCORL1Q5H9F3 1711 aa23.12■■□□□ 1.29
HDAC5-203ENST00000586339 LRRIQ1Q96JM4 1722 aa23.11■■□□□ 1.29
HDAC5-203ENST00000586339 CDK11AQ9UQ88 783 aaPredicted RBP23.1■■□□□ 1.29
HDAC5-203ENST00000586339 KIF14Q15058 1648 aa23.1■■□□□ 1.29
HDAC5-203ENST00000586339 PLCH2O75038 1416 aa23.09■■□□□ 1.29
HDAC5-203ENST00000586339 TROQ12816 1431 aaPredicted RBP23.07■■□□□ 1.28
HDAC5-203ENST00000586339 MAGI2Q86UL8 1455 aa23.05■■□□□ 1.28
HDAC5-203ENST00000586339 ATP1B4Q9UN42 357 aaPredicted RBP23.05■■□□□ 1.28
HDAC5-203ENST00000586339 CLIP1P30622 1438 aa23.04■■□□□ 1.28
HDAC5-203ENST00000586339 ZFYVE16Q7Z3T8 1539 aa23.03■■□□□ 1.28
HDAC5-203ENST00000586339 PCF11O94913 1555 aaKnown RBP23.03■■□□□ 1.28
HDAC5-203ENST00000586339 PTPRMP28827 1452 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms