RNA–Protein interactions for RNA: ENST00000586207.5

LDLRAD4-206, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-206ENST00000586207 KIAA0586Q9BVV6 1533 aa29.1■■■□□ 2.25
LDLRAD4-206ENST00000586207 RAPGEF2Q9Y4G8 1499 aa29.09■■■□□ 2.25
LDLRAD4-206ENST00000586207 CSRNP3Q8WYN3 585 aa29.06■■■□□ 2.24
LDLRAD4-206ENST00000586207 PRXQ9BXM0 1461 aa29.02■■■□□ 2.24
LDLRAD4-206ENST00000586207 PRG4Q92954 1404 aaPredicted RBP29.02■■■□□ 2.24
LDLRAD4-206ENST00000586207 SHROOM2Q13796 1616 aa29.02■■■□□ 2.24
LDLRAD4-206ENST00000586207 EEA1Q15075 1411 aa29■■■□□ 2.23
LDLRAD4-206ENST00000586207 ERCC6L2Q5T890 1561 aa28.98■■■□□ 2.23
LDLRAD4-206ENST00000586207 FAM9AQ8IZU1 332 aaPredicted RBP28.9■■■□□ 2.22
LDLRAD4-206ENST00000586207 IQGAP2Q13576 1575 aa28.8■■■□□ 2.2
LDLRAD4-206ENST00000586207 CARMIL2Q6F5E8 1435 aa28.77■■■□□ 2.2
LDLRAD4-206ENST00000586207 UGGT2Q9NYU1 1516 aa28.73■■■□□ 2.19
LDLRAD4-206ENST00000586207 TNIKQ9UKE5 1360 aa28.71■■■□□ 2.19
LDLRAD4-206ENST00000586207 PTPRGP23470 1445 aa28.7■■■□□ 2.19
LDLRAD4-206ENST00000586207 DISP1Q96F81 1524 aa28.7■■■□□ 2.19
LDLRAD4-206ENST00000586207 TTBK1Q5TCY1 1321 aaPredicted RBP28.59■■■□□ 2.17
LDLRAD4-206ENST00000586207 KIF21BO75037 1637 aa28.58■■■□□ 2.17
LDLRAD4-206ENST00000586207 GOLGA3Q08378 1498 aa28.57■■■□□ 2.16
LDLRAD4-206ENST00000586207 TRHP20396 242 aaPredicted RBP28.55■■■□□ 2.16
LDLRAD4-206ENST00000586207 NPM1P06748 294 aaKnown RBP eCLIP28.54■■■□□ 2.16
LDLRAD4-206ENST00000586207 CTTNBP2Q8WZ74 1663 aa28.54■■■□□ 2.16
LDLRAD4-206ENST00000586207 KIAA0556O60303 1618 aa28.52■■■□□ 2.16
LDLRAD4-206ENST00000586207 UBTFP17480 764 aaKnown RBP28.49■■■□□ 2.15
LDLRAD4-206ENST00000586207 UACAQ9BZF9 1416 aa28.49■■■□□ 2.15
LDLRAD4-206ENST00000586207 EHMT2Q96KQ7 1210 aa28.47■■■□□ 2.15
LDLRAD4-206ENST00000586207 P3H3Q8IVL6 736 aa28.46■■■□□ 2.15
LDLRAD4-206ENST00000586207 UHRF1BP1LA0JNW5 1464 aa28.46■■■□□ 2.15
LDLRAD4-206ENST00000586207 ADCY10Q96PN6 1610 aa28.45■■■□□ 2.14
LDLRAD4-206ENST00000586207 RANGAP1P46060 587 aaPredicted RBP28.4■■■□□ 2.14
LDLRAD4-206ENST00000586207 ABCC2Q92887 1545 aa28.38■■■□□ 2.13
LDLRAD4-206ENST00000586207 PLB1Q6P1J6 1458 aa28.34■■■□□ 2.13
LDLRAD4-206ENST00000586207 SAMD9Q5K651 1589 aa28.34■■■□□ 2.13
LDLRAD4-206ENST00000586207 MAPKBP1O60336 1514 aa28.33■■■□□ 2.13
LDLRAD4-206ENST00000586207 KDM5BQ9UGL1 1544 aa28.3■■■□□ 2.12
LDLRAD4-206ENST00000586207 ABCA8O94911 1581 aa28.27■■■□□ 2.12
LDLRAD4-206ENST00000586207 ABCC10Q5T3U5 1492 aa28.26■■■□□ 2.11
LDLRAD4-206ENST00000586207 FHOD3Q2V2M9 1422 aa28.26■■■□□ 2.11
LDLRAD4-206ENST00000586207 FAM69CQ0P6D2 419 aa28.25■■■□□ 2.11
LDLRAD4-206ENST00000586207 EFCAB5A4FU69 1503 aa28.24■■■□□ 2.11
LDLRAD4-206ENST00000586207 ASXL2Q76L83 1435 aa28.22■■■□□ 2.11
LDLRAD4-206ENST00000586207 ARHGAP35Q9NRY4 1499 aa28.17■■■□□ 2.1
LDLRAD4-206ENST00000586207 ATP10BO94823 1461 aa28.13■■■□□ 2.09
LDLRAD4-206ENST00000586207 DIP2BQ9P265 1576 aa28.09■■■□□ 2.09
LDLRAD4-206ENST00000586207 ARID3CA6NKF2 412 aa28.09■■■□□ 2.09
LDLRAD4-206ENST00000586207 ZCCHC11Q5TAX3 1644 aaKnown RBP28.09■■■□□ 2.09
LDLRAD4-206ENST00000586207 FMN1Q68DA7 1419 aa28.06■■■□□ 2.08
LDLRAD4-206ENST00000586207 NUP153P49790 1475 aaKnown RBP28.06■■■□□ 2.08
LDLRAD4-206ENST00000586207 EPRSP07814 1512 aaKnown RBP28.05■■■□□ 2.08
LDLRAD4-206ENST00000586207 WDR7Q9Y4E6 1490 aa28.05■■■□□ 2.08
LDLRAD4-206ENST00000586207 RAPGEF6Q8TEU7 1601 aa28.04■■■□□ 2.08
LDLRAD4-206ENST00000586207 LOC105371045A0A1W2PR82 267 aa28.03■■■□□ 2.08
LDLRAD4-206ENST00000586207 CLIP1P30622 1438 aa28.01■■■□□ 2.08
LDLRAD4-206ENST00000586207 GLI2P10070 1586 aa28.01■■■□□ 2.07
LDLRAD4-206ENST00000586207 KCNH8Q96L42 1107 aa28■■■□□ 2.07
LDLRAD4-206ENST00000586207 KIF13AQ9H1H9 1805 aa27.99■■■□□ 2.07
LDLRAD4-206ENST00000586207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.99■■■□□ 2.07
LDLRAD4-206ENST00000586207 HNRNPUL2Q1KMD3 747 aaKnown RBP27.99■■■□□ 2.07
LDLRAD4-206ENST00000586207 PLEKHD1A6NEE1 506 aa27.93■■■□□ 2.06
LDLRAD4-206ENST00000586207 ATP1B4Q9UN42 357 aaPredicted RBP27.92■■■□□ 2.06
LDLRAD4-206ENST00000586207 CEP162Q5TB80 1403 aa27.86■■■□□ 2.05
LDLRAD4-206ENST00000586207 CASKIN1Q8WXD9 1431 aa27.85■■■□□ 2.05
LDLRAD4-206ENST00000586207 CD109Q6YHK3 1445 aa27.84■■■□□ 2.05
LDLRAD4-206ENST00000586207 CDK11AQ9UQ88 783 aaPredicted RBP27.8■■■□□ 2.04
LDLRAD4-206ENST00000586207 CDK13Q14004 1512 aaKnown RBP27.8■■■□□ 2.04
LDLRAD4-206ENST00000586207 MAP3K4Q9Y6R4 1608 aa27.79■■■□□ 2.04
LDLRAD4-206ENST00000586207 HECW1Q76N89 1606 aa27.78■■■□□ 2.04
LDLRAD4-206ENST00000586207 MAGI3Q5TCQ9 1506 aa27.77■■■□□ 2.04
LDLRAD4-206ENST00000586207 TEX14Q8IWB6 1497 aa27.76■■■□□ 2.03
LDLRAD4-206ENST00000586207 FYCO1Q9BQS8 1478 aa27.72■■■□□ 2.03
LDLRAD4-206ENST00000586207 PPRC1Q5VV67 1664 aaKnown RBP27.71■■■□□ 2.03
LDLRAD4-206ENST00000586207 PCF11O94913 1555 aaKnown RBP27.69■■■□□ 2.02
LDLRAD4-206ENST00000586207 ABCA9Q8IUA7 1624 aa27.68■■■□□ 2.02
LDLRAD4-206ENST00000586207 CCDC18Q5T9S5 1454 aa27.68■■■□□ 2.02
LDLRAD4-206ENST00000586207 CFAP43Q8NDM7 1665 aa27.68■■■□□ 2.02
LDLRAD4-206ENST00000586207 COL17A1Q9UMD9 1497 aaPredicted RBP27.67■■■□□ 2.02
LDLRAD4-206ENST00000586207 TROQ12816 1431 aaPredicted RBP27.66■■■□□ 2.02
LDLRAD4-206ENST00000586207 TSPOAP1O95153 1857 aa27.66■■■□□ 2.02
LDLRAD4-206ENST00000586207 PHLDB1Q86UU1 1377 aa27.63■■■□□ 2.01
LDLRAD4-206ENST00000586207 KDM6BO15054 1643 aa27.62■■■□□ 2.01
LDLRAD4-206ENST00000586207 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.62■■■□□ 2.01
LDLRAD4-206ENST00000586207 NEO1Q92859 1461 aa27.56■■■□□ 2
LDLRAD4-206ENST00000586207 PLCH2O75038 1416 aa27.55■■■□□ 2
LDLRAD4-206ENST00000586207 VPS8Q8N3P4 1428 aa27.54■■■□□ 2
LDLRAD4-206ENST00000586207 ARAP3Q8WWN8 1544 aa27.53■■■□□ 2
LDLRAD4-206ENST00000586207 LRRIQ1Q96JM4 1722 aa27.53■■■□□ 2
LDLRAD4-206ENST00000586207 TTC37Q6PGP7 1564 aa27.5■■□□□ 1.99
LDLRAD4-206ENST00000586207 EFCAB2Q5VUJ9 269 aa27.48■■□□□ 1.99
LDLRAD4-206ENST00000586207 FANCAO15360 1455 aa27.48■■□□□ 1.99
LDLRAD4-206ENST00000586207 AKNAQ7Z591 1439 aa27.47■■□□□ 1.99
LDLRAD4-206ENST00000586207 KIF14Q15058 1648 aa27.45■■□□□ 1.99
LDLRAD4-206ENST00000586207 RAPGEF3O95398 923 aa27.45■■□□□ 1.98
LDLRAD4-206ENST00000586207 MTUS2Q5JR59 1369 aa27.44■■□□□ 1.98
LDLRAD4-206ENST00000586207 DENND4BO75064 1496 aaPredicted RBP27.37■■□□□ 1.97
LDLRAD4-206ENST00000586207 SCAPERQ9BY12 1400 aa27.34■■□□□ 1.97
LDLRAD4-206ENST00000586207 GPATCH8Q9UKJ3 1502 aaKnown RBP27.32■■□□□ 1.96
LDLRAD4-206ENST00000586207 ADGRL1O94910 1474 aa27.32■■□□□ 1.96
LDLRAD4-206ENST00000586207 MAP3K1Q13233 1512 aa27.31■■□□□ 1.96
LDLRAD4-206ENST00000586207 CFAP74Q9C0B2 1584 aa27.31■■□□□ 1.96
LDLRAD4-206ENST00000586207 ARHGAP5Q13017 1502 aa27.31■■□□□ 1.96
LDLRAD4-206ENST00000586207 CCNB3Q8WWL7 1395 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms