RNA–Protein interactions for RNA: ENST00000586118.5

MBD1-213, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-213ENST00000586118 TRHP20396 242 aaPredicted RBP29.71■■■□□ 2.35
MBD1-213ENST00000586118 CARMIL1Q5VZK9 1371 aa29.7■■■□□ 2.35
MBD1-213ENST00000586118 JPH4Q96JJ6 628 aa29.7■■■□□ 2.35
MBD1-213ENST00000586118 KIAA0586Q9BVV6 1533 aa29.66■■■□□ 2.34
MBD1-213ENST00000586118 RAPGEF2Q9Y4G8 1499 aa29.49■■■□□ 2.31
MBD1-213ENST00000586118 IQGAP2Q13576 1575 aa29.45■■■□□ 2.31
MBD1-213ENST00000586118 CARMIL2Q6F5E8 1435 aa29.4■■■□□ 2.3
MBD1-213ENST00000586118 NPM1P06748 294 aaKnown RBP eCLIP29.32■■■□□ 2.28
MBD1-213ENST00000586118 PTPRGP23470 1445 aa29.31■■■□□ 2.28
MBD1-213ENST00000586118 TNIKQ9UKE5 1360 aa29.3■■■□□ 2.28
MBD1-213ENST00000586118 ADCY10Q96PN6 1610 aa29.28■■■□□ 2.28
MBD1-213ENST00000586118 TTBK1Q5TCY1 1321 aaPredicted RBP29.27■■■□□ 2.28
MBD1-213ENST00000586118 PRXQ9BXM0 1461 aa29.26■■■□□ 2.27
MBD1-213ENST00000586118 UGGT2Q9NYU1 1516 aa29.25■■■□□ 2.27
MBD1-213ENST00000586118 DISP1Q96F81 1524 aa29.22■■■□□ 2.27
MBD1-213ENST00000586118 CTTNBP2Q8WZ74 1663 aa29.21■■■□□ 2.27
MBD1-213ENST00000586118 MAPKBP1O60336 1514 aa29.2■■■□□ 2.27
MBD1-213ENST00000586118 EEA1Q15075 1411 aa29.17■■■□□ 2.26
MBD1-213ENST00000586118 KIAA0556O60303 1618 aa29.16■■■□□ 2.26
MBD1-213ENST00000586118 CSRNP3Q8WYN3 585 aa29.15■■■□□ 2.26
MBD1-213ENST00000586118 GOLGA3Q08378 1498 aa29.11■■■□□ 2.25
MBD1-213ENST00000586118 ABCC10Q5T3U5 1492 aa29.11■■■□□ 2.25
MBD1-213ENST00000586118 ABCC2Q92887 1545 aa29.1■■■□□ 2.25
MBD1-213ENST00000586118 KIF13AQ9H1H9 1805 aa29.1■■■□□ 2.25
MBD1-213ENST00000586118 UACAQ9BZF9 1416 aa29.1■■■□□ 2.25
MBD1-213ENST00000586118 UHRF1BP1LA0JNW5 1464 aa29.09■■■□□ 2.25
MBD1-213ENST00000586118 FAM69CQ0P6D2 419 aa29.07■■■□□ 2.24
MBD1-213ENST00000586118 DIP2BQ9P265 1576 aa29.05■■■□□ 2.24
MBD1-213ENST00000586118 FAM9AQ8IZU1 332 aaPredicted RBP28.99■■■□□ 2.23
MBD1-213ENST00000586118 PLB1Q6P1J6 1458 aa28.96■■■□□ 2.23
MBD1-213ENST00000586118 ASXL2Q76L83 1435 aa28.95■■■□□ 2.23
MBD1-213ENST00000586118 CHIC1Q5VXU3 224 aa28.95■■■□□ 2.22
MBD1-213ENST00000586118 KDM5BQ9UGL1 1544 aa28.94■■■□□ 2.22
MBD1-213ENST00000586118 ZCCHC11Q5TAX3 1644 aaKnown RBP28.87■■■□□ 2.21
MBD1-213ENST00000586118 KIF21BO75037 1637 aa28.87■■■□□ 2.21
MBD1-213ENST00000586118 ABCA8O94911 1581 aa28.84■■■□□ 2.21
MBD1-213ENST00000586118 P3H3Q8IVL6 736 aa28.82■■■□□ 2.2
MBD1-213ENST00000586118 SAMD9Q5K651 1589 aa28.82■■■□□ 2.2
MBD1-213ENST00000586118 GLI2P10070 1586 aa28.8■■■□□ 2.2
MBD1-213ENST00000586118 TSPOAP1O95153 1857 aa28.78■■■□□ 2.2
MBD1-213ENST00000586118 EPRSP07814 1512 aaKnown RBP28.77■■■□□ 2.2
MBD1-213ENST00000586118 RANGAP1P46060 587 aaPredicted RBP28.76■■■□□ 2.19
MBD1-213ENST00000586118 WDR7Q9Y4E6 1490 aa28.76■■■□□ 2.19
MBD1-213ENST00000586118 KDM6BO15054 1643 aa28.72■■■□□ 2.19
MBD1-213ENST00000586118 EFCAB5A4FU69 1503 aa28.67■■■□□ 2.18
MBD1-213ENST00000586118 UBTFP17480 764 aaKnown RBP28.66■■■□□ 2.18
MBD1-213ENST00000586118 EHMT2Q96KQ7 1210 aa28.66■■■□□ 2.18
MBD1-213ENST00000586118 FHOD3Q2V2M9 1422 aa28.66■■■□□ 2.18
MBD1-213ENST00000586118 MAP3K4Q9Y6R4 1608 aa28.65■■■□□ 2.18
MBD1-213ENST00000586118 ARID3CA6NKF2 412 aa28.64■■■□□ 2.18
MBD1-213ENST00000586118 RAPGEF6Q8TEU7 1601 aa28.64■■■□□ 2.18
MBD1-213ENST00000586118 TEX14Q8IWB6 1497 aa28.63■■■□□ 2.17
MBD1-213ENST00000586118 PPRC1Q5VV67 1664 aaKnown RBP28.62■■■□□ 2.17
MBD1-213ENST00000586118 KCNH8Q96L42 1107 aa28.59■■■□□ 2.17
MBD1-213ENST00000586118 ATP10BO94823 1461 aa28.59■■■□□ 2.17
MBD1-213ENST00000586118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.54■■■□□ 2.16
MBD1-213ENST00000586118 HNRNPUL2Q1KMD3 747 aaKnown RBP28.54■■■□□ 2.16
MBD1-213ENST00000586118 AEBP2Q6ZN18 517 aaPredicted RBP28.54■■■□□ 2.16
MBD1-213ENST00000586118 CFAP43Q8NDM7 1665 aa28.53■■■□□ 2.16
MBD1-213ENST00000586118 NUP153P49790 1475 aaKnown RBP28.53■■■□□ 2.16
MBD1-213ENST00000586118 CD109Q6YHK3 1445 aa28.52■■■□□ 2.16
MBD1-213ENST00000586118 MAGI3Q5TCQ9 1506 aa28.48■■■□□ 2.15
MBD1-213ENST00000586118 FMN1Q68DA7 1419 aa28.42■■■□□ 2.14
MBD1-213ENST00000586118 ARHGAP35Q9NRY4 1499 aa28.4■■■□□ 2.14
MBD1-213ENST00000586118 COL17A1Q9UMD9 1497 aaPredicted RBP28.39■■■□□ 2.13
MBD1-213ENST00000586118 ABCA9Q8IUA7 1624 aa28.38■■■□□ 2.13
MBD1-213ENST00000586118 PLEKHD1A6NEE1 506 aa28.36■■■□□ 2.13
MBD1-213ENST00000586118 HECW1Q76N89 1606 aa28.32■■■□□ 2.12
MBD1-213ENST00000586118 ATP1B4Q9UN42 357 aaPredicted RBP28.32■■■□□ 2.12
MBD1-213ENST00000586118 CDK13Q14004 1512 aaKnown RBP28.29■■■□□ 2.12
MBD1-213ENST00000586118 PHLDB1Q86UU1 1377 aa28.26■■■□□ 2.12
MBD1-213ENST00000586118 ARAP3Q8WWN8 1544 aa28.23■■■□□ 2.11
MBD1-213ENST00000586118 NEO1Q92859 1461 aa28.22■■■□□ 2.11
MBD1-213ENST00000586118 CDK11AQ9UQ88 783 aaPredicted RBP28.2■■■□□ 2.1
MBD1-213ENST00000586118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.17■■■□□ 2.1
MBD1-213ENST00000586118 CLIP1P30622 1438 aa28.17■■■□□ 2.1
MBD1-213ENST00000586118 KDM4FA0A1W2PPD8 638 aa28.16■■■□□ 2.1
MBD1-213ENST00000586118 TTC37Q6PGP7 1564 aa28.15■■■□□ 2.1
MBD1-213ENST00000586118 PCF11O94913 1555 aaKnown RBP28.12■■■□□ 2.09
MBD1-213ENST00000586118 CFAP74Q9C0B2 1584 aa28.12■■■□□ 2.09
MBD1-213ENST00000586118 CASKIN1Q8WXD9 1431 aa28.12■■■□□ 2.09
MBD1-213ENST00000586118 ADGRL1O94910 1474 aa28.12■■■□□ 2.09
MBD1-213ENST00000586118 FANCAO15360 1455 aa28.11■■■□□ 2.09
MBD1-213ENST00000586118 CCDC18Q5T9S5 1454 aa28.1■■■□□ 2.09
MBD1-213ENST00000586118 KIF14Q15058 1648 aa28.07■■■□□ 2.08
MBD1-213ENST00000586118 TROQ12816 1431 aaPredicted RBP28.07■■■□□ 2.08
MBD1-213ENST00000586118 RAPGEF3O95398 923 aa28.06■■■□□ 2.08
MBD1-213ENST00000586118 FYCO1Q9BQS8 1478 aa28.06■■■□□ 2.08
MBD1-213ENST00000586118 AKNAQ7Z591 1439 aa28.05■■■□□ 2.08
MBD1-213ENST00000586118 DENND4BO75064 1496 aaPredicted RBP28.03■■■□□ 2.08
MBD1-213ENST00000586118 PLCH2O75038 1416 aa28.02■■■□□ 2.08
MBD1-213ENST00000586118 LRRIQ1Q96JM4 1722 aa28.01■■■□□ 2.07
MBD1-213ENST00000586118 FRMPD1Q5SYB0 1578 aa28■■■□□ 2.07
MBD1-213ENST00000586118 MYO5CQ9NQX4 1742 aa27.98■■■□□ 2.07
MBD1-213ENST00000586118 CEP162Q5TB80 1403 aa27.93■■■□□ 2.06
MBD1-213ENST00000586118 EFCAB2Q5VUJ9 269 aa27.93■■■□□ 2.06
MBD1-213ENST00000586118 RICTORQ6R327 1708 aa27.92■■■□□ 2.06
MBD1-213ENST00000586118 ARHGAP5Q13017 1502 aa27.92■■■□□ 2.06
MBD1-213ENST00000586118 ARHGEF40Q8TER5 1519 aa27.9■■■□□ 2.06
MBD1-213ENST00000586118 SCAPERQ9BY12 1400 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 264.4 ms