RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ARAP1Q96P48 1450 aa23.18■■□□□ 1.3
PRKCSH-202ENST00000585540 PRXQ9BXM0 1461 aa23.15■■□□□ 1.3
PRKCSH-202ENST00000585540 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.29
PRKCSH-202ENST00000585540 JPH4Q96JJ6 628 aa23.11■■□□□ 1.29
PRKCSH-202ENST00000585540 IQGAP2Q13576 1575 aa23.1■■□□□ 1.29
PRKCSH-202ENST00000585540 PRG4Q92954 1404 aaPredicted RBP23.08■■□□□ 1.28
PRKCSH-202ENST00000585540 CSRNP3Q8WYN3 585 aa23.07■■□□□ 1.28
PRKCSH-202ENST00000585540 CYB5RLQ6IPT4 315 aa23.05■■□□□ 1.28
PRKCSH-202ENST00000585540 CTTNBP2Q8WZ74 1663 aa23.03■■□□□ 1.28
PRKCSH-202ENST00000585540 CARMIL2Q6F5E8 1435 aa23.01■■□□□ 1.27
PRKCSH-202ENST00000585540 ERCC6L2Q5T890 1561 aa23.01■■□□□ 1.27
PRKCSH-202ENST00000585540 UGGT2Q9NYU1 1516 aa22.98■■□□□ 1.27
PRKCSH-202ENST00000585540 KIF21BO75037 1637 aa22.97■■□□□ 1.27
PRKCSH-202ENST00000585540 GOLGA3Q08378 1498 aa22.92■■□□□ 1.26
PRKCSH-202ENST00000585540 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.26
PRKCSH-202ENST00000585540 DISP1Q96F81 1524 aa22.87■■□□□ 1.25
PRKCSH-202ENST00000585540 KIAA0556O60303 1618 aa22.86■■□□□ 1.25
PRKCSH-202ENST00000585540 PTPRGP23470 1445 aa22.82■■□□□ 1.24
PRKCSH-202ENST00000585540 FAM9AQ8IZU1 332 aaPredicted RBP22.78■■□□□ 1.24
PRKCSH-202ENST00000585540 UHRF1BP1LA0JNW5 1464 aa22.75■■□□□ 1.23
PRKCSH-202ENST00000585540 SAMD9Q5K651 1589 aa22.73■■□□□ 1.23
PRKCSH-202ENST00000585540 ADCY10Q96PN6 1610 aa22.73■■□□□ 1.23
PRKCSH-202ENST00000585540 NPM1P06748 294 aaKnown RBP eCLIP22.71■■□□□ 1.23
PRKCSH-202ENST00000585540 UACAQ9BZF9 1416 aa22.71■■□□□ 1.23
PRKCSH-202ENST00000585540 EFCAB5A4FU69 1503 aa22.71■■□□□ 1.23
PRKCSH-202ENST00000585540 MAPKBP1O60336 1514 aa22.71■■□□□ 1.23
PRKCSH-202ENST00000585540 ABCC2Q92887 1545 aa22.7■■□□□ 1.22
PRKCSH-202ENST00000585540 ABCA8O94911 1581 aa22.61■■□□□ 1.21
PRKCSH-202ENST00000585540 UBTFP17480 764 aaKnown RBP22.61■■□□□ 1.21
PRKCSH-202ENST00000585540 KDM5BQ9UGL1 1544 aa22.61■■□□□ 1.21
PRKCSH-202ENST00000585540 TRHP20396 242 aaPredicted RBP22.58■■□□□ 1.21
PRKCSH-202ENST00000585540 PLB1Q6P1J6 1458 aa22.55■■□□□ 1.2
PRKCSH-202ENST00000585540 ABCC10Q5T3U5 1492 aa22.54■■□□□ 1.2
PRKCSH-202ENST00000585540 TTBK1Q5TCY1 1321 aaPredicted RBP22.54■■□□□ 1.2
PRKCSH-202ENST00000585540 ZCCHC11Q5TAX3 1644 aaKnown RBP22.51■■□□□ 1.19
PRKCSH-202ENST00000585540 RAPGEF6Q8TEU7 1601 aa22.5■■□□□ 1.19
PRKCSH-202ENST00000585540 DIP2BQ9P265 1576 aa22.5■■□□□ 1.19
PRKCSH-202ENST00000585540 FHOD3Q2V2M9 1422 aa22.48■■□□□ 1.19
PRKCSH-202ENST00000585540 KIF13AQ9H1H9 1805 aa22.47■■□□□ 1.19
PRKCSH-202ENST00000585540 FMN1Q68DA7 1419 aa22.47■■□□□ 1.19
PRKCSH-202ENST00000585540 ASXL2Q76L83 1435 aa22.46■■□□□ 1.19
PRKCSH-202ENST00000585540 P3H3Q8IVL6 736 aa22.45■■□□□ 1.18
PRKCSH-202ENST00000585540 ARHGAP35Q9NRY4 1499 aa22.45■■□□□ 1.18
PRKCSH-202ENST00000585540 GLI2P10070 1586 aa22.45■■□□□ 1.18
PRKCSH-202ENST00000585540 EHMT2Q96KQ7 1210 aa22.43■■□□□ 1.18
PRKCSH-202ENST00000585540 WDR7Q9Y4E6 1490 aa22.41■■□□□ 1.18
PRKCSH-202ENST00000585540 RANGAP1P46060 587 aaPredicted RBP22.38■■□□□ 1.17
PRKCSH-202ENST00000585540 FAM69CQ0P6D2 419 aa22.37■■□□□ 1.17
PRKCSH-202ENST00000585540 EPRSP07814 1512 aaKnown RBP22.36■■□□□ 1.17
PRKCSH-202ENST00000585540 NUP153P49790 1475 aaKnown RBP22.36■■□□□ 1.17
PRKCSH-202ENST00000585540 HECW1Q76N89 1606 aa22.35■■□□□ 1.17
PRKCSH-202ENST00000585540 ATP10BO94823 1461 aa22.35■■□□□ 1.17
PRKCSH-202ENST00000585540 CLIP1P30622 1438 aa22.33■■□□□ 1.17
PRKCSH-202ENST00000585540 MAP3K4Q9Y6R4 1608 aa22.29■■□□□ 1.16
PRKCSH-202ENST00000585540 CFAP43Q8NDM7 1665 aa22.28■■□□□ 1.16
PRKCSH-202ENST00000585540 TEX14Q8IWB6 1497 aa22.27■■□□□ 1.16
PRKCSH-202ENST00000585540 CASKIN1Q8WXD9 1431 aa22.24■■□□□ 1.15
PRKCSH-202ENST00000585540 CEP162Q5TB80 1403 aa22.23■■□□□ 1.15
PRKCSH-202ENST00000585540 CCDC18Q5T9S5 1454 aa22.23■■□□□ 1.15
PRKCSH-202ENST00000585540 FYCO1Q9BQS8 1478 aa22.23■■□□□ 1.15
PRKCSH-202ENST00000585540 MAGI3Q5TCQ9 1506 aa22.21■■□□□ 1.15
PRKCSH-202ENST00000585540 ABCA9Q8IUA7 1624 aa22.2■■□□□ 1.15
PRKCSH-202ENST00000585540 PLEKHD1A6NEE1 506 aa22.2■■□□□ 1.14
PRKCSH-202ENST00000585540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.2■■□□□ 1.14
PRKCSH-202ENST00000585540 HNRNPUL2Q1KMD3 747 aaKnown RBP22.2■■□□□ 1.14
PRKCSH-202ENST00000585540 CDK11AQ9UQ88 783 aaPredicted RBP22.19■■□□□ 1.14
PRKCSH-202ENST00000585540 PCF11O94913 1555 aaKnown RBP22.19■■□□□ 1.14
PRKCSH-202ENST00000585540 PPRC1Q5VV67 1664 aaKnown RBP22.19■■□□□ 1.14
PRKCSH-202ENST00000585540 TSPOAP1O95153 1857 aa22.18■■□□□ 1.14
PRKCSH-202ENST00000585540 CD109Q6YHK3 1445 aa22.16■■□□□ 1.14
PRKCSH-202ENST00000585540 CDK13Q14004 1512 aaKnown RBP22.16■■□□□ 1.14
PRKCSH-202ENST00000585540 ARID3CA6NKF2 412 aa22.14■■□□□ 1.13
PRKCSH-202ENST00000585540 KDM6BO15054 1643 aa22.13■■□□□ 1.13
PRKCSH-202ENST00000585540 PHLDB1Q86UU1 1377 aa22.12■■□□□ 1.13
PRKCSH-202ENST00000585540 KCNH8Q96L42 1107 aa22.12■■□□□ 1.13
PRKCSH-202ENST00000585540 LOC105371045A0A1W2PR82 267 aa22.11■■□□□ 1.13
PRKCSH-202ENST00000585540 TROQ12816 1431 aaPredicted RBP22.09■■□□□ 1.13
PRKCSH-202ENST00000585540 ATP1B4Q9UN42 357 aaPredicted RBP22.08■■□□□ 1.13
PRKCSH-202ENST00000585540 LRRIQ1Q96JM4 1722 aa22.08■■□□□ 1.12
PRKCSH-202ENST00000585540 KIF14Q15058 1648 aa22.07■■□□□ 1.12
PRKCSH-202ENST00000585540 CFAP74Q9C0B2 1584 aa22.07■■□□□ 1.12
PRKCSH-202ENST00000585540 NEO1Q92859 1461 aa22.05■■□□□ 1.12
PRKCSH-202ENST00000585540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.05■■□□□ 1.12
PRKCSH-202ENST00000585540 ARAP3Q8WWN8 1544 aa22.04■■□□□ 1.12
PRKCSH-202ENST00000585540 VPS8Q8N3P4 1428 aa22.02■■□□□ 1.12
PRKCSH-202ENST00000585540 TTC37Q6PGP7 1564 aa21.99■■□□□ 1.11
PRKCSH-202ENST00000585540 MYO5CQ9NQX4 1742 aa21.97■■□□□ 1.11
PRKCSH-202ENST00000585540 PLCH2O75038 1416 aa21.95■■□□□ 1.1
PRKCSH-202ENST00000585540 EHBP1L1Q8N3D4 1523 aa21.94■■□□□ 1.1
PRKCSH-202ENST00000585540 FANCAO15360 1455 aa21.93■■□□□ 1.1
PRKCSH-202ENST00000585540 MAP3K1Q13233 1512 aa21.92■■□□□ 1.1
PRKCSH-202ENST00000585540 MTUS2Q5JR59 1369 aa21.9■■□□□ 1.1
PRKCSH-202ENST00000585540 COL17A1Q9UMD9 1497 aaPredicted RBP21.89■■□□□ 1.09
PRKCSH-202ENST00000585540 AKNAQ7Z591 1439 aa21.88■■□□□ 1.09
PRKCSH-202ENST00000585540 PREX2Q70Z35 1606 aa21.88■■□□□ 1.09
PRKCSH-202ENST00000585540 TIAM1Q13009 1591 aa21.87■■□□□ 1.09
PRKCSH-202ENST00000585540 EFCAB2Q5VUJ9 269 aa21.86■■□□□ 1.09
PRKCSH-202ENST00000585540 DENND4BO75064 1496 aaPredicted RBP21.84■■□□□ 1.09
PRKCSH-202ENST00000585540 ARHGAP5Q13017 1502 aa21.84■■□□□ 1.09
PRKCSH-202ENST00000585540 ADGRL1O94910 1474 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms