RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 JPH4Q96JJ6 628 aa28.63■■■□□ 2.17
LSM12-202ENST00000585388 IGF1RP08069 1367 aa28.58■■■□□ 2.17
LSM12-202ENST00000585388 KIAA0586Q9BVV6 1533 aa28.55■■■□□ 2.16
LSM12-202ENST00000585388 KIF13AQ9H1H9 1805 aa28.46■■■□□ 2.15
LSM12-202ENST00000585388 CARMIL1Q5VZK9 1371 aa28.42■■■□□ 2.14
LSM12-202ENST00000585388 ADCY10Q96PN6 1610 aa28.4■■■□□ 2.14
LSM12-202ENST00000585388 MAPKBP1O60336 1514 aa28.38■■■□□ 2.13
LSM12-202ENST00000585388 NPM1P06748 294 aaKnown RBP eCLIP28.36■■■□□ 2.13
LSM12-202ENST00000585388 IQGAP2Q13576 1575 aa28.33■■■□□ 2.12
LSM12-202ENST00000585388 ABCC10Q5T3U5 1492 aa28.31■■■□□ 2.12
LSM12-202ENST00000585388 CARMIL2Q6F5E8 1435 aa28.29■■■□□ 2.12
LSM12-202ENST00000585388 DIP2BQ9P265 1576 aa28.28■■■□□ 2.12
LSM12-202ENST00000585388 PTPRGP23470 1445 aa28.25■■■□□ 2.11
LSM12-202ENST00000585388 TNIKQ9UKE5 1360 aa28.22■■■□□ 2.11
LSM12-202ENST00000585388 RAPGEF2Q9Y4G8 1499 aa28.21■■■□□ 2.11
LSM12-202ENST00000585388 FAM69CQ0P6D2 419 aa28.21■■■□□ 2.11
LSM12-202ENST00000585388 AEBP2Q6ZN18 517 aaPredicted RBP28.17■■■□□ 2.1
LSM12-202ENST00000585388 ABCC2Q92887 1545 aa28.14■■■□□ 2.1
LSM12-202ENST00000585388 DISP1Q96F81 1524 aa28.13■■■□□ 2.09
LSM12-202ENST00000585388 UGGT2Q9NYU1 1516 aa28.13■■■□□ 2.09
LSM12-202ENST00000585388 TTBK1Q5TCY1 1321 aaPredicted RBP28.11■■■□□ 2.09
LSM12-202ENST00000585388 UHRF1BP1LA0JNW5 1464 aa28.09■■■□□ 2.09
LSM12-202ENST00000585388 CTTNBP2Q8WZ74 1663 aa28.07■■■□□ 2.08
LSM12-202ENST00000585388 KIAA0556O60303 1618 aa28.07■■■□□ 2.08
LSM12-202ENST00000585388 TSPOAP1O95153 1857 aa28.06■■■□□ 2.08
LSM12-202ENST00000585388 UACAQ9BZF9 1416 aa28.05■■■□□ 2.08
LSM12-202ENST00000585388 KDM6BO15054 1643 aa28.04■■■□□ 2.08
LSM12-202ENST00000585388 PLB1Q6P1J6 1458 aa28.02■■■□□ 2.08
LSM12-202ENST00000585388 ASXL2Q76L83 1435 aa28.01■■■□□ 2.07
LSM12-202ENST00000585388 GLI2P10070 1586 aa27.97■■■□□ 2.07
LSM12-202ENST00000585388 KDM5BQ9UGL1 1544 aa27.96■■■□□ 2.07
LSM12-202ENST00000585388 ZCCHC11Q5TAX3 1644 aaKnown RBP27.92■■■□□ 2.06
LSM12-202ENST00000585388 GOLGA3Q08378 1498 aa27.92■■■□□ 2.06
LSM12-202ENST00000585388 PRXQ9BXM0 1461 aa27.92■■■□□ 2.06
LSM12-202ENST00000585388 PPRC1Q5VV67 1664 aaKnown RBP27.88■■■□□ 2.05
LSM12-202ENST00000585388 EPRSP07814 1512 aaKnown RBP27.84■■■□□ 2.05
LSM12-202ENST00000585388 MAP3K4Q9Y6R4 1608 aa27.84■■■□□ 2.05
LSM12-202ENST00000585388 ABCA8O94911 1581 aa27.78■■■□□ 2.04
LSM12-202ENST00000585388 WDR7Q9Y4E6 1490 aa27.78■■■□□ 2.04
LSM12-202ENST00000585388 TEX14Q8IWB6 1497 aa27.76■■■□□ 2.04
LSM12-202ENST00000585388 EEA1Q15075 1411 aa27.67■■■□□ 2.02
LSM12-202ENST00000585388 CFAP43Q8NDM7 1665 aa27.66■■■□□ 2.02
LSM12-202ENST00000585388 CSRNP3Q8WYN3 585 aa27.66■■■□□ 2.02
LSM12-202ENST00000585388 FAM9AQ8IZU1 332 aaPredicted RBP27.65■■■□□ 2.02
LSM12-202ENST00000585388 SAMD9Q5K651 1589 aa27.63■■■□□ 2.01
LSM12-202ENST00000585388 COL17A1Q9UMD9 1497 aaPredicted RBP27.6■■■□□ 2.01
LSM12-202ENST00000585388 KDM4FA0A1W2PPD8 638 aa27.59■■■□□ 2.01
LSM12-202ENST00000585388 MAGI3Q5TCQ9 1506 aa27.58■■■□□ 2.01
LSM12-202ENST00000585388 CD109Q6YHK3 1445 aa27.56■■■□□ 2
LSM12-202ENST00000585388 P3H3Q8IVL6 736 aa27.53■■■□□ 2
LSM12-202ENST00000585388 RAPGEF6Q8TEU7 1601 aa27.52■■■□□ 2
LSM12-202ENST00000585388 KCNH8Q96L42 1107 aa27.51■■□□□ 1.99
LSM12-202ENST00000585388 ATP10BO94823 1461 aa27.5■■□□□ 1.99
LSM12-202ENST00000585388 ADGRL1O94910 1474 aa27.49■■□□□ 1.99
LSM12-202ENST00000585388 KIF21BO75037 1637 aa27.45■■□□□ 1.99
LSM12-202ENST00000585388 ABCA9Q8IUA7 1624 aa27.43■■□□□ 1.98
LSM12-202ENST00000585388 ARID3CA6NKF2 412 aa27.43■■□□□ 1.98
LSM12-202ENST00000585388 EFCAB5A4FU69 1503 aa27.39■■□□□ 1.98
LSM12-202ENST00000585388 FHOD3Q2V2M9 1422 aa27.38■■□□□ 1.97
LSM12-202ENST00000585388 NUP153P49790 1475 aaKnown RBP27.37■■□□□ 1.97
LSM12-202ENST00000585388 ARAP3Q8WWN8 1544 aa27.36■■□□□ 1.97
LSM12-202ENST00000585388 RANGAP1P46060 587 aaPredicted RBP27.32■■□□□ 1.96
LSM12-202ENST00000585388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.31■■□□□ 1.96
LSM12-202ENST00000585388 HNRNPUL2Q1KMD3 747 aaKnown RBP27.31■■□□□ 1.96
LSM12-202ENST00000585388 PHLDB1Q86UU1 1377 aa27.31■■□□□ 1.96
LSM12-202ENST00000585388 NEO1Q92859 1461 aa27.27■■□□□ 1.96
LSM12-202ENST00000585388 PLEKHD1A6NEE1 506 aa27.18■■□□□ 1.94
LSM12-202ENST00000585388 CFAP74Q9C0B2 1584 aa27.18■■□□□ 1.94
LSM12-202ENST00000585388 FRMPD1Q5SYB0 1578 aa27.15■■□□□ 1.94
LSM12-202ENST00000585388 UBTFP17480 764 aaKnown RBP27.13■■□□□ 1.93
LSM12-202ENST00000585388 CHIC1Q5VXU3 224 aa27.13■■□□□ 1.93
LSM12-202ENST00000585388 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.12■■□□□ 1.93
LSM12-202ENST00000585388 HECW1Q76N89 1606 aa27.12■■□□□ 1.93
LSM12-202ENST00000585388 CDK13Q14004 1512 aaKnown RBP27.11■■□□□ 1.93
LSM12-202ENST00000585388 HECW2Q9P2P5 1572 aa27.11■■□□□ 1.93
LSM12-202ENST00000585388 FMN1Q68DA7 1419 aa27.11■■□□□ 1.93
LSM12-202ENST00000585388 TTC37Q6PGP7 1564 aa27.1■■□□□ 1.93
LSM12-202ENST00000585388 RAPGEF3O95398 923 aa27.09■■□□□ 1.93
LSM12-202ENST00000585388 FANCAO15360 1455 aa27.08■■□□□ 1.93
LSM12-202ENST00000585388 RICTORQ6R327 1708 aa27.07■■□□□ 1.92
LSM12-202ENST00000585388 ARHGAP35Q9NRY4 1499 aa27.06■■□□□ 1.92
LSM12-202ENST00000585388 DENND4BO75064 1496 aaPredicted RBP27.06■■□□□ 1.92
LSM12-202ENST00000585388 EHMT2Q96KQ7 1210 aa27.05■■□□□ 1.92
LSM12-202ENST00000585388 ARHGEF40Q8TER5 1519 aa27.05■■□□□ 1.92
LSM12-202ENST00000585388 AKNAQ7Z591 1439 aa27.04■■□□□ 1.92
LSM12-202ENST00000585388 ADAMTSL3P82987 1691 aa27.03■■□□□ 1.92
LSM12-202ENST00000585388 BCORL1Q5H9F3 1711 aa27■■□□□ 1.91
LSM12-202ENST00000585388 ZMYM4Q5VZL5 1548 aa26.99■■□□□ 1.91
LSM12-202ENST00000585388 MYO5CQ9NQX4 1742 aa26.96■■□□□ 1.91
LSM12-202ENST00000585388 ATP1B4Q9UN42 357 aaPredicted RBP26.95■■□□□ 1.9
LSM12-202ENST00000585388 CDK11AQ9UQ88 783 aaPredicted RBP26.94■■□□□ 1.9
LSM12-202ENST00000585388 KIF14Q15058 1648 aa26.94■■□□□ 1.9
LSM12-202ENST00000585388 PTPRMP28827 1452 aa26.93■■□□□ 1.9
LSM12-202ENST00000585388 PLCH2O75038 1416 aa26.93■■□□□ 1.9
LSM12-202ENST00000585388 ARID4BQ4LE39 1312 aaPredicted RBP26.92■■□□□ 1.9
LSM12-202ENST00000585388 MADDQ8WXG6 1647 aa26.92■■□□□ 1.9
LSM12-202ENST00000585388 ZFYVE16Q7Z3T8 1539 aa26.91■■□□□ 1.9
LSM12-202ENST00000585388 MAGI2Q86UL8 1455 aa26.9■■□□□ 1.9
LSM12-202ENST00000585388 LRRIQ1Q96JM4 1722 aa26.88■■□□□ 1.89
LSM12-202ENST00000585388 CLIP1P30622 1438 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms