RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 CUL7Q14999 1698 aa23.21■■□□□ 1.31
PRKCSH-201ENST00000585325 PRG4Q92954 1404 aaPredicted RBP23.2■■□□□ 1.3
PRKCSH-201ENST00000585325 IGF1RP08069 1367 aa23.2■■□□□ 1.3
PRKCSH-201ENST00000585325 JPH4Q96JJ6 628 aa23.19■■□□□ 1.3
PRKCSH-201ENST00000585325 FAM69CQ0P6D2 419 aa23.11■■□□□ 1.29
PRKCSH-201ENST00000585325 ABCC10Q5T3U5 1492 aa23.1■■□□□ 1.29
PRKCSH-201ENST00000585325 KIAA0586Q9BVV6 1533 aa23.09■■□□□ 1.29
PRKCSH-201ENST00000585325 CARMIL1Q5VZK9 1371 aa23.08■■□□□ 1.29
PRKCSH-201ENST00000585325 MAPKBP1O60336 1514 aa23.03■■□□□ 1.28
PRKCSH-201ENST00000585325 DIP2BQ9P265 1576 aa23.02■■□□□ 1.28
PRKCSH-201ENST00000585325 KDM4FA0A1W2PPD8 638 aa23.02■■□□□ 1.28
PRKCSH-201ENST00000585325 NPM1P06748 294 aaKnown RBP eCLIP23.02■■□□□ 1.28
PRKCSH-201ENST00000585325 KDM6BO15054 1643 aa22.98■■□□□ 1.27
PRKCSH-201ENST00000585325 ADCY10Q96PN6 1610 aa22.96■■□□□ 1.27
PRKCSH-201ENST00000585325 IQGAP2Q13576 1575 aa22.93■■□□□ 1.26
PRKCSH-201ENST00000585325 ILDR1Q86SU0 546 aaPredicted RBP22.92■■□□□ 1.26
PRKCSH-201ENST00000585325 RAPGEF2Q9Y4G8 1499 aa22.9■■□□□ 1.26
PRKCSH-201ENST00000585325 CARMIL2Q6F5E8 1435 aa22.88■■□□□ 1.25
PRKCSH-201ENST00000585325 TTBK1Q5TCY1 1321 aaPredicted RBP22.87■■□□□ 1.25
PRKCSH-201ENST00000585325 TSPOAP1O95153 1857 aa22.86■■□□□ 1.25
PRKCSH-201ENST00000585325 PTPRGP23470 1445 aa22.86■■□□□ 1.25
PRKCSH-201ENST00000585325 TNIKQ9UKE5 1360 aa22.83■■□□□ 1.25
PRKCSH-201ENST00000585325 DISP1Q96F81 1524 aa22.78■■□□□ 1.24
PRKCSH-201ENST00000585325 UGGT2Q9NYU1 1516 aa22.76■■□□□ 1.23
PRKCSH-201ENST00000585325 CTTNBP2Q8WZ74 1663 aa22.74■■□□□ 1.23
PRKCSH-201ENST00000585325 ABCC2Q92887 1545 aa22.72■■□□□ 1.23
PRKCSH-201ENST00000585325 KIAA0556O60303 1618 aa22.71■■□□□ 1.23
PRKCSH-201ENST00000585325 ADGRL1O94910 1474 aa22.7■■□□□ 1.22
PRKCSH-201ENST00000585325 UACAQ9BZF9 1416 aa22.69■■□□□ 1.22
PRKCSH-201ENST00000585325 UHRF1BP1LA0JNW5 1464 aa22.68■■□□□ 1.22
PRKCSH-201ENST00000585325 PRXQ9BXM0 1461 aa22.67■■□□□ 1.22
PRKCSH-201ENST00000585325 PPRC1Q5VV67 1664 aaKnown RBP22.65■■□□□ 1.22
PRKCSH-201ENST00000585325 ASXL2Q76L83 1435 aa22.65■■□□□ 1.22
PRKCSH-201ENST00000585325 GLI2P10070 1586 aa22.63■■□□□ 1.21
PRKCSH-201ENST00000585325 PLB1Q6P1J6 1458 aa22.63■■□□□ 1.21
PRKCSH-201ENST00000585325 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
PRKCSH-201ENST00000585325 KDM5BQ9UGL1 1544 aa22.58■■□□□ 1.21
PRKCSH-201ENST00000585325 COL17A1Q9UMD9 1497 aaPredicted RBP22.58■■□□□ 1.2
PRKCSH-201ENST00000585325 HECW2Q9P2P5 1572 aa22.58■■□□□ 1.2
PRKCSH-201ENST00000585325 ZCCHC11Q5TAX3 1644 aaKnown RBP22.57■■□□□ 1.2
PRKCSH-201ENST00000585325 CSRNP3Q8WYN3 585 aa22.55■■□□□ 1.2
PRKCSH-201ENST00000585325 EPRSP07814 1512 aaKnown RBP22.5■■□□□ 1.19
PRKCSH-201ENST00000585325 EEA1Q15075 1411 aa22.49■■□□□ 1.19
PRKCSH-201ENST00000585325 MAP3K4Q9Y6R4 1608 aa22.49■■□□□ 1.19
PRKCSH-201ENST00000585325 TEX14Q8IWB6 1497 aa22.47■■□□□ 1.19
PRKCSH-201ENST00000585325 ABCA8O94911 1581 aa22.47■■□□□ 1.19
PRKCSH-201ENST00000585325 P3H3Q8IVL6 736 aa22.44■■□□□ 1.18
PRKCSH-201ENST00000585325 WDR7Q9Y4E6 1490 aa22.44■■□□□ 1.18
PRKCSH-201ENST00000585325 FAM9AQ8IZU1 332 aaPredicted RBP22.43■■□□□ 1.18
PRKCSH-201ENST00000585325 SAMD9Q5K651 1589 aa22.39■■□□□ 1.18
PRKCSH-201ENST00000585325 RANGAP1P46060 587 aaPredicted RBP22.35■■□□□ 1.17
PRKCSH-201ENST00000585325 ARID3CA6NKF2 412 aa22.34■■□□□ 1.17
PRKCSH-201ENST00000585325 KCNH8Q96L42 1107 aa22.34■■□□□ 1.17
PRKCSH-201ENST00000585325 KIF21BO75037 1637 aa22.32■■□□□ 1.16
PRKCSH-201ENST00000585325 CFAP43Q8NDM7 1665 aa22.31■■□□□ 1.16
PRKCSH-201ENST00000585325 RAPGEF6Q8TEU7 1601 aa22.29■■□□□ 1.16
PRKCSH-201ENST00000585325 ATP10BO94823 1461 aa22.28■■□□□ 1.16
PRKCSH-201ENST00000585325 CD109Q6YHK3 1445 aa22.28■■□□□ 1.16
PRKCSH-201ENST00000585325 FHOD3Q2V2M9 1422 aa22.26■■□□□ 1.15
PRKCSH-201ENST00000585325 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
PRKCSH-201ENST00000585325 FBXO41Q8TF61 875 aa22.26■■□□□ 1.15
PRKCSH-201ENST00000585325 MAGI3Q5TCQ9 1506 aa22.26■■□□□ 1.15
PRKCSH-201ENST00000585325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.22■■□□□ 1.15
PRKCSH-201ENST00000585325 HNRNPUL2Q1KMD3 747 aaKnown RBP22.22■■□□□ 1.15
PRKCSH-201ENST00000585325 EHMT2Q96KQ7 1210 aa22.21■■□□□ 1.15
PRKCSH-201ENST00000585325 EFCAB5A4FU69 1503 aa22.21■■□□□ 1.15
PRKCSH-201ENST00000585325 NUP153P49790 1475 aaKnown RBP22.18■■□□□ 1.14
PRKCSH-201ENST00000585325 UBTFP17480 764 aaKnown RBP22.16■■□□□ 1.14
PRKCSH-201ENST00000585325 ABCA9Q8IUA7 1624 aa22.16■■□□□ 1.14
PRKCSH-201ENST00000585325 ARAP3Q8WWN8 1544 aa22.09■■□□□ 1.13
PRKCSH-201ENST00000585325 PTPRMP28827 1452 aa22.09■■□□□ 1.13
PRKCSH-201ENST00000585325 PLEKHD1A6NEE1 506 aa22.06■■□□□ 1.12
PRKCSH-201ENST00000585325 ADAMTSL3P82987 1691 aa22.05■■□□□ 1.12
PRKCSH-201ENST00000585325 PHLDB1Q86UU1 1377 aa22.03■■□□□ 1.12
PRKCSH-201ENST00000585325 NEO1Q92859 1461 aa22.02■■□□□ 1.12
PRKCSH-201ENST00000585325 ARHGAP35Q9NRY4 1499 aa22.02■■□□□ 1.12
PRKCSH-201ENST00000585325 CDK13Q14004 1512 aaKnown RBP22.01■■□□□ 1.11
PRKCSH-201ENST00000585325 FMN1Q68DA7 1419 aa22■■□□□ 1.11
PRKCSH-201ENST00000585325 ATP1B4Q9UN42 357 aaPredicted RBP21.99■■□□□ 1.11
PRKCSH-201ENST00000585325 PCF11O94913 1555 aaKnown RBP21.99■■□□□ 1.11
PRKCSH-201ENST00000585325 HECW1Q76N89 1606 aa21.98■■□□□ 1.11
PRKCSH-201ENST00000585325 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.96■■□□□ 1.11
PRKCSH-201ENST00000585325 RAPGEF3O95398 923 aa21.96■■□□□ 1.11
PRKCSH-201ENST00000585325 LMTK3Q96Q04 1460 aa21.96■■□□□ 1.11
PRKCSH-201ENST00000585325 TTC37Q6PGP7 1564 aa21.95■■□□□ 1.1
PRKCSH-201ENST00000585325 BCORL1Q5H9F3 1711 aa21.94■■□□□ 1.1
PRKCSH-201ENST00000585325 MADDQ8WXG6 1647 aa21.94■■□□□ 1.1
PRKCSH-201ENST00000585325 CFAP74Q9C0B2 1584 aa21.92■■□□□ 1.1
PRKCSH-201ENST00000585325 ARID4BQ4LE39 1312 aaPredicted RBP21.92■■□□□ 1.1
PRKCSH-201ENST00000585325 FRMPD1Q5SYB0 1578 aa21.91■■□□□ 1.1
PRKCSH-201ENST00000585325 FANCAO15360 1455 aa21.91■■□□□ 1.1
PRKCSH-201ENST00000585325 AKNAQ7Z591 1439 aa21.89■■□□□ 1.09
PRKCSH-201ENST00000585325 DENND4BO75064 1496 aaPredicted RBP21.87■■□□□ 1.09
PRKCSH-201ENST00000585325 CDK11AQ9UQ88 783 aaPredicted RBP21.86■■□□□ 1.09
PRKCSH-201ENST00000585325 RICTORQ6R327 1708 aa21.85■■□□□ 1.09
PRKCSH-201ENST00000585325 RIMS1Q86UR5 1692 aaKnown RBP21.84■■□□□ 1.09
PRKCSH-201ENST00000585325 LRRIQ1Q96JM4 1722 aa21.83■■□□□ 1.09
PRKCSH-201ENST00000585325 HSPA2P54652 639 aa21.83■■□□□ 1.09
PRKCSH-201ENST00000585325 ARHGEF40Q8TER5 1519 aa21.82■■□□□ 1.08
PRKCSH-201ENST00000585325 PLCH2O75038 1416 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms