RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 KIAA0586Q9BVV6 1533 aa45.87■■■■■ 4.93
SMARCD2-210ENST00000584400 PRG4Q92954 1404 aaPredicted RBP45.81■■■■■ 4.92
SMARCD2-210ENST00000584400 ERCC6L2Q5T890 1561 aa45.77■■■■■ 4.92
SMARCD2-210ENST00000584400 RAPGEF2Q9Y4G8 1499 aa45.77■■■■■ 4.92
SMARCD2-210ENST00000584400 EEA1Q15075 1411 aa45.53■■■■■ 4.88
SMARCD2-210ENST00000584400 IQGAP2Q13576 1575 aa45.52■■■■■ 4.88
SMARCD2-210ENST00000584400 PRXQ9BXM0 1461 aa45.51■■■■■ 4.88
SMARCD2-210ENST00000584400 CSRNP3Q8WYN3 585 aa45.5■■■■■ 4.87
SMARCD2-210ENST00000584400 CHIC1Q5VXU3 224 aa45.47■■■■■ 4.87
SMARCD2-210ENST00000584400 CARMIL2Q6F5E8 1435 aa45.46■■■■■ 4.87
SMARCD2-210ENST00000584400 TRHP20396 242 aaPredicted RBP45.42■■■■■ 4.86
SMARCD2-210ENST00000584400 TNIKQ9UKE5 1360 aa45.29■■■■■ 4.84
SMARCD2-210ENST00000584400 PTPRGP23470 1445 aa45.27■■■■■ 4.84
SMARCD2-210ENST00000584400 UGGT2Q9NYU1 1516 aa45.27■■■■■ 4.84
SMARCD2-210ENST00000584400 FAM9AQ8IZU1 332 aaPredicted RBP45.22■■■■■ 4.83
SMARCD2-210ENST00000584400 NPM1P06748 294 aaKnown RBP eCLIP45.21■■■■■ 4.83
SMARCD2-210ENST00000584400 CTTNBP2Q8WZ74 1663 aa45.21■■■■■ 4.83
SMARCD2-210ENST00000584400 DISP1Q96F81 1524 aa45.19■■■■■ 4.82
SMARCD2-210ENST00000584400 TTBK1Q5TCY1 1321 aaPredicted RBP45.14■■■■■ 4.82
SMARCD2-210ENST00000584400 GOLGA3Q08378 1498 aa45.1■■■■■ 4.81
SMARCD2-210ENST00000584400 KIAA0556O60303 1618 aa45.06■■■■■ 4.8
SMARCD2-210ENST00000584400 ADCY10Q96PN6 1610 aa45.04■■■■■ 4.8
SMARCD2-210ENST00000584400 UACAQ9BZF9 1416 aa44.95■■■■■ 4.79
SMARCD2-210ENST00000584400 KIF21BO75037 1637 aa44.93■■■■■ 4.78
SMARCD2-210ENST00000584400 UHRF1BP1LA0JNW5 1464 aa44.91■■■■■ 4.78
SMARCD2-210ENST00000584400 MAPKBP1O60336 1514 aa44.9■■■■■ 4.78
SMARCD2-210ENST00000584400 ABCC2Q92887 1545 aa44.86■■■■■ 4.77
SMARCD2-210ENST00000584400 ABCC10Q5T3U5 1492 aa44.74■■■■■ 4.75
SMARCD2-210ENST00000584400 UBTFP17480 764 aaKnown RBP44.7■■■■■ 4.75
SMARCD2-210ENST00000584400 FAM69CQ0P6D2 419 aa44.7■■■■■ 4.75
SMARCD2-210ENST00000584400 P3H3Q8IVL6 736 aa44.7■■■■■ 4.75
SMARCD2-210ENST00000584400 KDM5BQ9UGL1 1544 aa44.67■■■■■ 4.74
SMARCD2-210ENST00000584400 SAMD9Q5K651 1589 aa44.66■■■■■ 4.74
SMARCD2-210ENST00000584400 PLB1Q6P1J6 1458 aa44.66■■■■■ 4.74
SMARCD2-210ENST00000584400 RANGAP1P46060 587 aaPredicted RBP44.64■■■■■ 4.74
SMARCD2-210ENST00000584400 EHMT2Q96KQ7 1210 aa44.61■■■■■ 4.73
SMARCD2-210ENST00000584400 ASXL2Q76L83 1435 aa44.59■■■■■ 4.73
SMARCD2-210ENST00000584400 ABCA8O94911 1581 aa44.59■■■■■ 4.73
SMARCD2-210ENST00000584400 DIP2BQ9P265 1576 aa44.58■■■■■ 4.73
SMARCD2-210ENST00000584400 KIF13AQ9H1H9 1805 aa44.57■■■■■ 4.73
SMARCD2-210ENST00000584400 EFCAB5A4FU69 1503 aa44.51■■■■■ 4.72
SMARCD2-210ENST00000584400 ZCCHC11Q5TAX3 1644 aaKnown RBP44.49■■■■■ 4.71
SMARCD2-210ENST00000584400 FHOD3Q2V2M9 1422 aa44.42■■■■■ 4.7
SMARCD2-210ENST00000584400 GLI2P10070 1586 aa44.35■■■■■ 4.69
SMARCD2-210ENST00000584400 WDR7Q9Y4E6 1490 aa44.34■■■■■ 4.69
SMARCD2-210ENST00000584400 EPRSP07814 1512 aaKnown RBP44.32■■■■■ 4.69
SMARCD2-210ENST00000584400 RAPGEF6Q8TEU7 1601 aa44.31■■■■■ 4.68
SMARCD2-210ENST00000584400 ATP10BO94823 1461 aa44.26■■■■■ 4.68
SMARCD2-210ENST00000584400 ARID3CA6NKF2 412 aa44.24■■■■■ 4.67
SMARCD2-210ENST00000584400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP44.19■■■■■ 4.66
SMARCD2-210ENST00000584400 HNRNPUL2Q1KMD3 747 aaKnown RBP44.19■■■■■ 4.66
SMARCD2-210ENST00000584400 ARHGAP35Q9NRY4 1499 aa44.19■■■■■ 4.66
SMARCD2-210ENST00000584400 FMN1Q68DA7 1419 aa44.16■■■■■ 4.66
SMARCD2-210ENST00000584400 KCNH8Q96L42 1107 aa44.16■■■■■ 4.66
SMARCD2-210ENST00000584400 NUP153P49790 1475 aaKnown RBP44.15■■■■■ 4.66
SMARCD2-210ENST00000584400 TSPOAP1O95153 1857 aa44.1■■■■■ 4.65
SMARCD2-210ENST00000584400 MAP3K4Q9Y6R4 1608 aa44.07■■■■■ 4.65
SMARCD2-210ENST00000584400 TEX14Q8IWB6 1497 aa44.04■■■■■ 4.64
SMARCD2-210ENST00000584400 CD109Q6YHK3 1445 aa43.99■■■■■ 4.63
SMARCD2-210ENST00000584400 PLEKHD1A6NEE1 506 aa43.99■■■■■ 4.63
SMARCD2-210ENST00000584400 KDM6BO15054 1643 aa43.97■■■■■ 4.63
SMARCD2-210ENST00000584400 ATP1B4Q9UN42 357 aaPredicted RBP43.95■■■■■ 4.63
SMARCD2-210ENST00000584400 PPRC1Q5VV67 1664 aaKnown RBP43.94■■■■■ 4.63
SMARCD2-210ENST00000584400 CFAP43Q8NDM7 1665 aa43.94■■■■■ 4.62
SMARCD2-210ENST00000584400 CLIP1P30622 1438 aa43.91■■■■■ 4.62
SMARCD2-210ENST00000584400 MAGI3Q5TCQ9 1506 aa43.9■■■■■ 4.62
SMARCD2-210ENST00000584400 HECW1Q76N89 1606 aa43.89■■■■■ 4.62
SMARCD2-210ENST00000584400 CDK11AQ9UQ88 783 aaPredicted RBP43.82■■■■■ 4.61
SMARCD2-210ENST00000584400 ABCA9Q8IUA7 1624 aa43.79■■■■■ 4.6
SMARCD2-210ENST00000584400 CDK13Q14004 1512 aaKnown RBP43.78■■■■■ 4.6
SMARCD2-210ENST00000584400 CASKIN1Q8WXD9 1431 aa43.73■■■■■ 4.59
SMARCD2-210ENST00000584400 PHLDB1Q86UU1 1377 aa43.67■■■■■ 4.58
SMARCD2-210ENST00000584400 COL17A1Q9UMD9 1497 aaPredicted RBP43.64■■■■■ 4.58
SMARCD2-210ENST00000584400 CEP162Q5TB80 1403 aa43.63■■■■■ 4.57
SMARCD2-210ENST00000584400 CCDC18Q5T9S5 1454 aa43.63■■■■■ 4.57
SMARCD2-210ENST00000584400 PCF11O94913 1555 aaKnown RBP43.62■■■■■ 4.57
SMARCD2-210ENST00000584400 FYCO1Q9BQS8 1478 aa43.6■■■■■ 4.57
SMARCD2-210ENST00000584400 LOC105371045A0A1W2PR82 267 aa43.57■■■■■ 4.57
SMARCD2-210ENST00000584400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP43.56■■■■■ 4.56
SMARCD2-210ENST00000584400 NEO1Q92859 1461 aa43.56■■■■■ 4.56
SMARCD2-210ENST00000584400 TROQ12816 1431 aaPredicted RBP43.53■■■■■ 4.56
SMARCD2-210ENST00000584400 ARAP3Q8WWN8 1544 aa43.52■■■■■ 4.56
SMARCD2-210ENST00000584400 TTC37Q6PGP7 1564 aa43.44■■■■■ 4.54
SMARCD2-210ENST00000584400 LRRIQ1Q96JM4 1722 aa43.42■■■■■ 4.54
SMARCD2-210ENST00000584400 KIF14Q15058 1648 aa43.42■■■■■ 4.54
SMARCD2-210ENST00000584400 FANCAO15360 1455 aa43.4■■■■■ 4.54
SMARCD2-210ENST00000584400 PLCH2O75038 1416 aa43.39■■■■■ 4.54
SMARCD2-210ENST00000584400 CFAP74Q9C0B2 1584 aa43.37■■■■■ 4.53
SMARCD2-210ENST00000584400 AEBP2Q6ZN18 517 aaPredicted RBP43.36■■■■■ 4.53
SMARCD2-210ENST00000584400 AKNAQ7Z591 1439 aa43.34■■■■■ 4.53
SMARCD2-210ENST00000584400 EFCAB2Q5VUJ9 269 aa43.29■■■■■ 4.52
SMARCD2-210ENST00000584400 RAPGEF3O95398 923 aa43.28■■■■■ 4.52
SMARCD2-210ENST00000584400 DENND4BO75064 1496 aaPredicted RBP43.25■■■■■ 4.51
SMARCD2-210ENST00000584400 MYO5CQ9NQX4 1742 aa43.22■■■■■ 4.51
SMARCD2-210ENST00000584400 MTUS2Q5JR59 1369 aa43.17■■■■■ 4.5
SMARCD2-210ENST00000584400 ADGRL1O94910 1474 aa43.16■■■■■ 4.5
SMARCD2-210ENST00000584400 VPS8Q8N3P4 1428 aa43.15■■■■■ 4.5
SMARCD2-210ENST00000584400 ARHGAP5Q13017 1502 aa43.15■■■■■ 4.5
SMARCD2-210ENST00000584400 SCAPERQ9BY12 1400 aa43.12■■■■■ 4.49
SMARCD2-210ENST00000584400 KDM4FA0A1W2PPD8 638 aa43.09■■■■■ 4.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms