RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 JPH4Q96JJ6 628 aa27.55■■■□□ 2
SKA2-209ENST00000583976 KIF27Q86VH2 1401 aa27.52■■■□□ 2
SKA2-209ENST00000583976 IGF1RP08069 1367 aa27.5■■□□□ 1.99
SKA2-209ENST00000583976 ADCY10Q96PN6 1610 aa27.49■■□□□ 1.99
SKA2-209ENST00000583976 KIAA0586Q9BVV6 1533 aa27.46■■□□□ 1.99
SKA2-209ENST00000583976 MAPKBP1O60336 1514 aa27.4■■□□□ 1.98
SKA2-209ENST00000583976 DIP2BQ9P265 1576 aa27.39■■□□□ 1.97
SKA2-209ENST00000583976 ABCC10Q5T3U5 1492 aa27.35■■□□□ 1.97
SKA2-209ENST00000583976 CARMIL1Q5VZK9 1371 aa27.32■■□□□ 1.96
SKA2-209ENST00000583976 IQGAP2Q13576 1575 aa27.28■■□□□ 1.96
SKA2-209ENST00000583976 AEBP2Q6ZN18 517 aaPredicted RBP27.27■■□□□ 1.96
SKA2-209ENST00000583976 FAM69CQ0P6D2 419 aa27.25■■□□□ 1.95
SKA2-209ENST00000583976 NPM1P06748 294 aaKnown RBP eCLIP27.21■■□□□ 1.95
SKA2-209ENST00000583976 TTBK1Q5TCY1 1321 aaPredicted RBP27.19■■□□□ 1.94
SKA2-209ENST00000583976 PTPRGP23470 1445 aa27.19■■□□□ 1.94
SKA2-209ENST00000583976 TSPOAP1O95153 1857 aa27.19■■□□□ 1.94
SKA2-209ENST00000583976 DISP1Q96F81 1524 aa27.15■■□□□ 1.94
SKA2-209ENST00000583976 CARMIL2Q6F5E8 1435 aa27.15■■□□□ 1.94
SKA2-209ENST00000583976 TNIKQ9UKE5 1360 aa27.14■■□□□ 1.94
SKA2-209ENST00000583976 KDM6BO15054 1643 aa27.13■■□□□ 1.93
SKA2-209ENST00000583976 ABCC2Q92887 1545 aa27.13■■□□□ 1.93
SKA2-209ENST00000583976 RAPGEF2Q9Y4G8 1499 aa27.1■■□□□ 1.93
SKA2-209ENST00000583976 UGGT2Q9NYU1 1516 aa27.07■■□□□ 1.92
SKA2-209ENST00000583976 KIAA0556O60303 1618 aa27.07■■□□□ 1.92
SKA2-209ENST00000583976 PPRC1Q5VV67 1664 aaKnown RBP27.05■■□□□ 1.92
SKA2-209ENST00000583976 ASXL2Q76L83 1435 aa27.04■■□□□ 1.92
SKA2-209ENST00000583976 UHRF1BP1LA0JNW5 1464 aa27.04■■□□□ 1.92
SKA2-209ENST00000583976 CTTNBP2Q8WZ74 1663 aa27.01■■□□□ 1.92
SKA2-209ENST00000583976 UACAQ9BZF9 1416 aa27.01■■□□□ 1.91
SKA2-209ENST00000583976 ZCCHC11Q5TAX3 1644 aaKnown RBP26.98■■□□□ 1.91
SKA2-209ENST00000583976 GLI2P10070 1586 aa26.97■■□□□ 1.91
SKA2-209ENST00000583976 PLB1Q6P1J6 1458 aa26.97■■□□□ 1.91
SKA2-209ENST00000583976 KDM5BQ9UGL1 1544 aa26.94■■□□□ 1.9
SKA2-209ENST00000583976 MAP3K4Q9Y6R4 1608 aa26.9■■□□□ 1.9
SKA2-209ENST00000583976 EPRSP07814 1512 aaKnown RBP26.9■■□□□ 1.9
SKA2-209ENST00000583976 PRXQ9BXM0 1461 aa26.84■■□□□ 1.89
SKA2-209ENST00000583976 ABCA8O94911 1581 aa26.8■■□□□ 1.88
SKA2-209ENST00000583976 KDM4FA0A1W2PPD8 638 aa26.79■■□□□ 1.88
SKA2-209ENST00000583976 COL17A1Q9UMD9 1497 aaPredicted RBP26.78■■□□□ 1.88
SKA2-209ENST00000583976 WDR7Q9Y4E6 1490 aa26.78■■□□□ 1.88
SKA2-209ENST00000583976 GOLGA3Q08378 1498 aa26.76■■□□□ 1.87
SKA2-209ENST00000583976 TEX14Q8IWB6 1497 aa26.71■■□□□ 1.87
SKA2-209ENST00000583976 ADGRL1O94910 1474 aa26.67■■□□□ 1.86
SKA2-209ENST00000583976 CFAP43Q8NDM7 1665 aa26.65■■□□□ 1.86
SKA2-209ENST00000583976 SAMD9Q5K651 1589 aa26.61■■□□□ 1.85
SKA2-209ENST00000583976 MAGI3Q5TCQ9 1506 aa26.57■■□□□ 1.84
SKA2-209ENST00000583976 ARID3CA6NKF2 412 aa26.56■■□□□ 1.84
SKA2-209ENST00000583976 CD109Q6YHK3 1445 aa26.56■■□□□ 1.84
SKA2-209ENST00000583976 P3H3Q8IVL6 736 aa26.55■■□□□ 1.84
SKA2-209ENST00000583976 KCNH8Q96L42 1107 aa26.52■■□□□ 1.84
SKA2-209ENST00000583976 RAPGEF6Q8TEU7 1601 aa26.5■■□□□ 1.83
SKA2-209ENST00000583976 ATP10BO94823 1461 aa26.5■■□□□ 1.83
SKA2-209ENST00000583976 CSRNP3Q8WYN3 585 aa26.46■■□□□ 1.83
SKA2-209ENST00000583976 KIF21BO75037 1637 aa26.45■■□□□ 1.82
SKA2-209ENST00000583976 ABCA9Q8IUA7 1624 aa26.45■■□□□ 1.82
SKA2-209ENST00000583976 FHOD3Q2V2M9 1422 aa26.41■■□□□ 1.82
SKA2-209ENST00000583976 NUP153P49790 1475 aaKnown RBP26.4■■□□□ 1.82
SKA2-209ENST00000583976 EEA1Q15075 1411 aa26.39■■□□□ 1.82
SKA2-209ENST00000583976 HECW2Q9P2P5 1572 aa26.37■■□□□ 1.81
SKA2-209ENST00000583976 RANGAP1P46060 587 aaPredicted RBP26.36■■□□□ 1.81
SKA2-209ENST00000583976 ARAP3Q8WWN8 1544 aa26.35■■□□□ 1.81
SKA2-209ENST00000583976 FAM9AQ8IZU1 332 aaPredicted RBP26.32■■□□□ 1.8
SKA2-209ENST00000583976 FRMPD1Q5SYB0 1578 aa26.31■■□□□ 1.8
SKA2-209ENST00000583976 EFCAB5A4FU69 1503 aa26.27■■□□□ 1.8
SKA2-209ENST00000583976 NEO1Q92859 1461 aa26.23■■□□□ 1.79
SKA2-209ENST00000583976 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.23■■□□□ 1.79
SKA2-209ENST00000583976 HNRNPUL2Q1KMD3 747 aaKnown RBP26.23■■□□□ 1.79
SKA2-209ENST00000583976 TTC37Q6PGP7 1564 aa26.2■■□□□ 1.79
SKA2-209ENST00000583976 CDK13Q14004 1512 aaKnown RBP26.19■■□□□ 1.78
SKA2-209ENST00000583976 RAPGEF3O95398 923 aa26.18■■□□□ 1.78
SKA2-209ENST00000583976 ADAMTSL3P82987 1691 aa26.16■■□□□ 1.78
SKA2-209ENST00000583976 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.16■■□□□ 1.78
SKA2-209ENST00000583976 PHLDB1Q86UU1 1377 aa26.16■■□□□ 1.78
SKA2-209ENST00000583976 ARHGEF40Q8TER5 1519 aa26.15■■□□□ 1.78
SKA2-209ENST00000583976 RICTORQ6R327 1708 aa26.15■■□□□ 1.78
SKA2-209ENST00000583976 EHMT2Q96KQ7 1210 aa26.13■■□□□ 1.77
SKA2-209ENST00000583976 CFAP74Q9C0B2 1584 aa26.11■■□□□ 1.77
SKA2-209ENST00000583976 BCORL1Q5H9F3 1711 aa26.11■■□□□ 1.77
SKA2-209ENST00000583976 MADDQ8WXG6 1647 aa26.1■■□□□ 1.77
SKA2-209ENST00000583976 FANCAO15360 1455 aa26.09■■□□□ 1.77
SKA2-209ENST00000583976 PTPRMP28827 1452 aa26.06■■□□□ 1.76
SKA2-209ENST00000583976 DENND4BO75064 1496 aaPredicted RBP26.05■■□□□ 1.76
SKA2-209ENST00000583976 HECW1Q76N89 1606 aa26.05■■□□□ 1.76
SKA2-209ENST00000583976 AKNAQ7Z591 1439 aa26.05■■□□□ 1.76
SKA2-209ENST00000583976 ARHGAP35Q9NRY4 1499 aa26.04■■□□□ 1.76
SKA2-209ENST00000583976 PLEKHD1A6NEE1 506 aa26.04■■□□□ 1.76
SKA2-209ENST00000583976 ILDR1Q86SU0 546 aaPredicted RBP26.04■■□□□ 1.76
SKA2-209ENST00000583976 SIGLEC1Q9BZZ2 1709 aa26.04■■□□□ 1.76
SKA2-209ENST00000583976 ZMYM4Q5VZL5 1548 aa26.03■■□□□ 1.76
SKA2-209ENST00000583976 KIF14Q15058 1648 aa25.99■■□□□ 1.75
SKA2-209ENST00000583976 RIMS1Q86UR5 1692 aaKnown RBP25.99■■□□□ 1.75
SKA2-209ENST00000583976 LRRIQ1Q96JM4 1722 aa25.98■■□□□ 1.75
SKA2-209ENST00000583976 ZFYVE16Q7Z3T8 1539 aa25.97■■□□□ 1.75
SKA2-209ENST00000583976 YEATS2Q9ULM3 1422 aa25.97■■□□□ 1.75
SKA2-209ENST00000583976 UBTFP17480 764 aaKnown RBP25.96■■□□□ 1.75
SKA2-209ENST00000583976 CHIC1Q5VXU3 224 aa25.96■■□□□ 1.75
SKA2-209ENST00000583976 FMN1Q68DA7 1419 aa25.96■■□□□ 1.75
SKA2-209ENST00000583976 MYO5CQ9NQX4 1742 aa25.95■■□□□ 1.74
SKA2-209ENST00000583976 ARID4BQ4LE39 1312 aaPredicted RBP25.94■■□□□ 1.74
SKA2-209ENST00000583976 POGZQ7Z3K3 1410 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms