RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 NPM1P06748 294 aaKnown RBP eCLIP16.06■□□□□ 0.16
CDK5RAP3-224ENST00000582275 PIAS4Q8N2W9 510 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-224ENST00000582275 FAM69CQ0P6D2 419 aa16.05■□□□□ 0.16
CDK5RAP3-224ENST00000582275 ABCC10Q5T3U5 1492 aa16.04■□□□□ 0.16
CDK5RAP3-224ENST00000582275 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
CDK5RAP3-224ENST00000582275 ILDR1Q86SU0 546 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-224ENST00000582275 PRG4Q92954 1404 aaPredicted RBP16.02■□□□□ 0.15
CDK5RAP3-224ENST00000582275 JPH4Q96JJ6 628 aa16■□□□□ 0.15
CDK5RAP3-224ENST00000582275 MAPKBP1O60336 1514 aa15.99■□□□□ 0.15
CDK5RAP3-224ENST00000582275 KDM4FA0A1W2PPD8 638 aa15.99■□□□□ 0.15
CDK5RAP3-224ENST00000582275 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
CDK5RAP3-224ENST00000582275 KDM6BO15054 1643 aa15.96■□□□□ 0.15
CDK5RAP3-224ENST00000582275 DIP2BQ9P265 1576 aa15.94■□□□□ 0.14
CDK5RAP3-224ENST00000582275 TOP2BQ02880 1626 aa15.88■□□□□ 0.13
CDK5RAP3-224ENST00000582275 BIVM-ERCC5R4GMW8 1640 aa15.86■□□□□ 0.13
CDK5RAP3-224ENST00000582275 ADCY10Q96PN6 1610 aa15.86■□□□□ 0.13
CDK5RAP3-224ENST00000582275 RUSC2Q8N2Y8 1516 aa15.84■□□□□ 0.13
CDK5RAP3-224ENST00000582275 TSPOAP1O95153 1857 aa15.82■□□□□ 0.12
CDK5RAP3-224ENST00000582275 KIAA0586Q9BVV6 1533 aa15.78■□□□□ 0.12
CDK5RAP3-224ENST00000582275 ADGRL1O94910 1474 aa15.77■□□□□ 0.11
CDK5RAP3-224ENST00000582275 MSH5O43196 834 aa15.76■□□□□ 0.11
CDK5RAP3-224ENST00000582275 PTPRGP23470 1445 aa15.74■□□□□ 0.11
CDK5RAP3-224ENST00000582275 PLB1Q6P1J6 1458 aa15.73■□□□□ 0.11
CDK5RAP3-224ENST00000582275 GLI2P10070 1586 aa15.71■□□□□ 0.11
CDK5RAP3-224ENST00000582275 ABCC2Q92887 1545 aa15.7■□□□□ 0.1
CDK5RAP3-224ENST00000582275 HECW2Q9P2P5 1572 aa15.69■□□□□ 0.1
CDK5RAP3-224ENST00000582275 CARMIL2Q6F5E8 1435 aa15.68■□□□□ 0.1
CDK5RAP3-224ENST00000582275 ASXL2Q76L83 1435 aa15.68■□□□□ 0.1
CDK5RAP3-224ENST00000582275 TNIKQ9UKE5 1360 aa15.67■□□□□ 0.1
CDK5RAP3-224ENST00000582275 TEX14Q8IWB6 1497 aa15.66■□□□□ 0.1
CDK5RAP3-224ENST00000582275 CUL7Q14999 1698 aa15.64■□□□□ 0.09
CDK5RAP3-224ENST00000582275 PPRC1Q5VV67 1664 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP3-224ENST00000582275 SUPT5HO00267 1087 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP3-224ENST00000582275 UHRF1BP1LA0JNW5 1464 aa15.63■□□□□ 0.09
CDK5RAP3-224ENST00000582275 IGF1RP08069 1367 aa15.62■□□□□ 0.09
CDK5RAP3-224ENST00000582275 KIF27Q86VH2 1401 aa15.61■□□□□ 0.09
CDK5RAP3-224ENST00000582275 FBXO41Q8TF61 875 aa15.6■□□□□ 0.09
CDK5RAP3-224ENST00000582275 TTBK1Q5TCY1 1321 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-224ENST00000582275 UACAQ9BZF9 1416 aa15.59■□□□□ 0.09
CDK5RAP3-224ENST00000582275 COL17A1Q9UMD9 1497 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP3-224ENST00000582275 EPRSP07814 1512 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP3-224ENST00000582275 MAP3K4Q9Y6R4 1608 aa15.57■□□□□ 0.08
CDK5RAP3-224ENST00000582275 KDM5BQ9UGL1 1544 aa15.54■□□□□ 0.08
CDK5RAP3-224ENST00000582275 CARMIL1Q5VZK9 1371 aa15.53■□□□□ 0.08
CDK5RAP3-224ENST00000582275 IQGAP2Q13576 1575 aa15.53■□□□□ 0.08
CDK5RAP3-224ENST00000582275 WDR7Q9Y4E6 1490 aa15.46■□□□□ 0.07
CDK5RAP3-224ENST00000582275 DISP1Q96F81 1524 aa15.46■□□□□ 0.07
CDK5RAP3-224ENST00000582275 ZCCHC11Q5TAX3 1644 aaKnown RBP15.46■□□□□ 0.06
CDK5RAP3-224ENST00000582275 MAGI3Q5TCQ9 1506 aa15.45■□□□□ 0.06
CDK5RAP3-224ENST00000582275 CD109Q6YHK3 1445 aa15.43■□□□□ 0.06
CDK5RAP3-224ENST00000582275 UGGT2Q9NYU1 1516 aa15.42■□□□□ 0.06
CDK5RAP3-224ENST00000582275 CFAP43Q8NDM7 1665 aa15.4■□□□□ 0.06
CDK5RAP3-224ENST00000582275 KIAA0556O60303 1618 aa15.37■□□□□ 0.05
CDK5RAP3-224ENST00000582275 KIF21BO75037 1637 aa15.35■□□□□ 0.05
CDK5RAP3-224ENST00000582275 KCNH8Q96L42 1107 aa15.35■□□□□ 0.05
CDK5RAP3-224ENST00000582275 PHLDB1Q86UU1 1377 aa15.35■□□□□ 0.05
CDK5RAP3-224ENST00000582275 RAPGEF2Q9Y4G8 1499 aa15.34■□□□□ 0.05
CDK5RAP3-224ENST00000582275 ARAP3Q8WWN8 1544 aa15.34■□□□□ 0.05
CDK5RAP3-224ENST00000582275 PTPRMP28827 1452 aa15.33■□□□□ 0.05
CDK5RAP3-224ENST00000582275 FAM9AQ8IZU1 332 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-224ENST00000582275 GOLGA3Q08378 1498 aa15.31■□□□□ 0.04
CDK5RAP3-224ENST00000582275 LMTK3Q96Q04 1460 aa15.3■□□□□ 0.04
CDK5RAP3-224ENST00000582275 ADAMTSL3P82987 1691 aa15.29■□□□□ 0.04
CDK5RAP3-224ENST00000582275 PCF11O94913 1555 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-224ENST00000582275 ABCA8O94911 1581 aa15.27■□□□□ 0.03
CDK5RAP3-224ENST00000582275 ARID4BQ4LE39 1312 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-224ENST00000582275 BCORL1Q5H9F3 1711 aa15.21■□□□□ 0.03
CDK5RAP3-224ENST00000582275 NEO1Q92859 1461 aa15.2■□□□□ 0.02
CDK5RAP3-224ENST00000582275 CERKQ8TCT0 537 aa15.19■□□□□ 0.02
CDK5RAP3-224ENST00000582275 CTTNBP2Q8WZ74 1663 aa15.19■□□□□ 0.02
CDK5RAP3-224ENST00000582275 ABCA9Q8IUA7 1624 aa15.18■□□□□ 0.02
CDK5RAP3-224ENST00000582275 RAPGEF3O95398 923 aa15.18■□□□□ 0.02
CDK5RAP3-224ENST00000582275 MADDQ8WXG6 1647 aa15.17■□□□□ 0.02
CDK5RAP3-224ENST00000582275 SOCS7O14512 581 aa15.16■□□□□ 0.02
CDK5RAP3-224ENST00000582275 POGZQ7Z3K3 1410 aa15.15■□□□□ 0.02
CDK5RAP3-224ENST00000582275 ATP10BO94823 1461 aa15.14■□□□□ 0.01
CDK5RAP3-224ENST00000582275 DISP3Q9P2K9 1392 aa15.12■□□□□ 0.01
CDK5RAP3-224ENST00000582275 HSPA2P54652 639 aa15.11■□□□□ 0.01
CDK5RAP3-224ENST00000582275 RIMS1Q86UR5 1692 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-224ENST00000582275 ARID3CA6NKF2 412 aa15.1■□□□□ 0.01
CDK5RAP3-224ENST00000582275 ARHGEF40Q8TER5 1519 aa15.1■□□□□ 0.01
CDK5RAP3-224ENST00000582275 FANCAO15360 1455 aa15.09■□□□□ 0.01
CDK5RAP3-224ENST00000582275 FRMPD1Q5SYB0 1578 aa15.09■□□□□ 0.01
CDK5RAP3-224ENST00000582275 DENND4BO75064 1496 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP3-224ENST00000582275 AKNAQ7Z591 1439 aa15.08■□□□□ 0
CDK5RAP3-224ENST00000582275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-224ENST00000582275 HNRNPUL2Q1KMD3 747 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-224ENST00000582275 DMRT2Q9Y5R5 561 aa15.06■□□□□ 0
CDK5RAP3-224ENST00000582275 FHOD3Q2V2M9 1422 aa15.06■□□□□ 0
CDK5RAP3-224ENST00000582275 ILDR2Q71H61 639 aa15.05■□□□□ -0
CDK5RAP3-224ENST00000582275 CFAP74Q9C0B2 1584 aa15.03■□□□□ -0
CDK5RAP3-224ENST00000582275 PRXQ9BXM0 1461 aa15.03■□□□□ -0
CDK5RAP3-224ENST00000582275 EFCAB5A4FU69 1503 aa15.02■□□□□ -0
CDK5RAP3-224ENST00000582275 MAGI2Q86UL8 1455 aa15.02■□□□□ -0
CDK5RAP3-224ENST00000582275 RICTORQ6R327 1708 aa15.01□□□□□ -0.01
CDK5RAP3-224ENST00000582275 P3H3Q8IVL6 736 aa15.01□□□□□ -0.01
CDK5RAP3-224ENST00000582275 RAPGEF6Q8TEU7 1601 aa15.01□□□□□ -0.01
CDK5RAP3-224ENST00000582275 ZMYM4Q5VZL5 1548 aa15.01□□□□□ -0.01
CDK5RAP3-224ENST00000582275 PLEKHD1A6NEE1 506 aa15□□□□□ -0.01
CDK5RAP3-224ENST00000582275 PPP4R3CPQ6ZMV5 832 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms