RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 RUSC2Q8N2Y8 1516 aa20.8■□□□□ 0.92
SRSF1-204ENST00000581979 JPH4Q96JJ6 628 aa20.8■□□□□ 0.92
SRSF1-204ENST00000581979 PRG4Q92954 1404 aaPredicted RBP20.78■□□□□ 0.92
SRSF1-204ENST00000581979 KIAA0586Q9BVV6 1533 aa20.73■□□□□ 0.91
SRSF1-204ENST00000581979 CARMIL1Q5VZK9 1371 aa20.72■□□□□ 0.91
SRSF1-204ENST00000581979 FAM9AQ8IZU1 332 aaPredicted RBP20.59■□□□□ 0.89
SRSF1-204ENST00000581979 RAPGEF2Q9Y4G8 1499 aa20.55■□□□□ 0.88
SRSF1-204ENST00000581979 IQGAP2Q13576 1575 aa20.54■□□□□ 0.88
SRSF1-204ENST00000581979 ADCY10Q96PN6 1610 aa20.52■□□□□ 0.88
SRSF1-204ENST00000581979 CARMIL2Q6F5E8 1435 aa20.51■□□□□ 0.87
SRSF1-204ENST00000581979 NPM1P06748 294 aaKnown RBP eCLIP20.49■□□□□ 0.87
SRSF1-204ENST00000581979 PTPRGP23470 1445 aa20.49■□□□□ 0.87
SRSF1-204ENST00000581979 MAPKBP1O60336 1514 aa20.49■□□□□ 0.87
SRSF1-204ENST00000581979 EEA1Q15075 1411 aa20.47■□□□□ 0.87
SRSF1-204ENST00000581979 KIF13AQ9H1H9 1805 aa20.47■□□□□ 0.87
SRSF1-204ENST00000581979 TNIKQ9UKE5 1360 aa20.47■□□□□ 0.87
SRSF1-204ENST00000581979 LOC105371045A0A1W2PR82 267 aa20.45■□□□□ 0.86
SRSF1-204ENST00000581979 DISP1Q96F81 1524 aa20.44■□□□□ 0.86
SRSF1-204ENST00000581979 UGGT2Q9NYU1 1516 aa20.44■□□□□ 0.86
SRSF1-204ENST00000581979 ABCC10Q5T3U5 1492 aa20.44■□□□□ 0.86
SRSF1-204ENST00000581979 PRXQ9BXM0 1461 aa20.41■□□□□ 0.86
SRSF1-204ENST00000581979 DIP2BQ9P265 1576 aa20.38■□□□□ 0.85
SRSF1-204ENST00000581979 FAM69CQ0P6D2 419 aa20.38■□□□□ 0.85
SRSF1-204ENST00000581979 UHRF1BP1LA0JNW5 1464 aa20.37■□□□□ 0.85
SRSF1-204ENST00000581979 ABCC2Q92887 1545 aa20.37■□□□□ 0.85
SRSF1-204ENST00000581979 TTBK1Q5TCY1 1321 aaPredicted RBP20.36■□□□□ 0.85
SRSF1-204ENST00000581979 CTTNBP2Q8WZ74 1663 aa20.36■□□□□ 0.85
SRSF1-204ENST00000581979 KIAA0556O60303 1618 aa20.35■□□□□ 0.85
SRSF1-204ENST00000581979 CSRNP3Q8WYN3 585 aa20.35■□□□□ 0.85
SRSF1-204ENST00000581979 UACAQ9BZF9 1416 aa20.34■□□□□ 0.85
SRSF1-204ENST00000581979 EHMT2Q96KQ7 1210 aa20.32■□□□□ 0.84
SRSF1-204ENST00000581979 GOLGA3Q08378 1498 aa20.28■□□□□ 0.84
SRSF1-204ENST00000581979 KDM5BQ9UGL1 1544 aa20.27■□□□□ 0.84
SRSF1-204ENST00000581979 PLB1Q6P1J6 1458 aa20.27■□□□□ 0.83
SRSF1-204ENST00000581979 ASXL2Q76L83 1435 aa20.26■□□□□ 0.83
SRSF1-204ENST00000581979 KIF21BO75037 1637 aa20.23■□□□□ 0.83
SRSF1-204ENST00000581979 GLI2P10070 1586 aa20.21■□□□□ 0.83
SRSF1-204ENST00000581979 ZCCHC11Q5TAX3 1644 aaKnown RBP20.19■□□□□ 0.82
SRSF1-204ENST00000581979 TSPOAP1O95153 1857 aa20.18■□□□□ 0.82
SRSF1-204ENST00000581979 ABCA8O94911 1581 aa20.17■□□□□ 0.82
SRSF1-204ENST00000581979 EPRSP07814 1512 aaKnown RBP20.15■□□□□ 0.82
SRSF1-204ENST00000581979 KDM6BO15054 1643 aa20.14■□□□□ 0.81
SRSF1-204ENST00000581979 PPRC1Q5VV67 1664 aaKnown RBP20.12■□□□□ 0.81
SRSF1-204ENST00000581979 UBTFP17480 764 aaKnown RBP20.11■□□□□ 0.81
SRSF1-204ENST00000581979 WDR7Q9Y4E6 1490 aa20.11■□□□□ 0.81
SRSF1-204ENST00000581979 SAMD9Q5K651 1589 aa20.1■□□□□ 0.81
SRSF1-204ENST00000581979 MAP3K4Q9Y6R4 1608 aa20.09■□□□□ 0.81
SRSF1-204ENST00000581979 AEBP2Q6ZN18 517 aaPredicted RBP20.07■□□□□ 0.8
SRSF1-204ENST00000581979 P3H3Q8IVL6 736 aa20.07■□□□□ 0.8
SRSF1-204ENST00000581979 TEX14Q8IWB6 1497 aa20.02■□□□□ 0.8
SRSF1-204ENST00000581979 ATP10BO94823 1461 aa20■□□□□ 0.79
SRSF1-204ENST00000581979 CEP162Q5TB80 1403 aa19.99■□□□□ 0.79
SRSF1-204ENST00000581979 RAPGEF6Q8TEU7 1601 aa19.97■□□□□ 0.79
SRSF1-204ENST00000581979 COL17A1Q9UMD9 1497 aaPredicted RBP19.97■□□□□ 0.79
SRSF1-204ENST00000581979 CFAP43Q8NDM7 1665 aa19.97■□□□□ 0.79
SRSF1-204ENST00000581979 KCNH8Q96L42 1107 aa19.96■□□□□ 0.79
SRSF1-204ENST00000581979 CD109Q6YHK3 1445 aa19.96■□□□□ 0.79
SRSF1-204ENST00000581979 MAGI3Q5TCQ9 1506 aa19.95■□□□□ 0.78
SRSF1-204ENST00000581979 EFCAB5A4FU69 1503 aa19.94■□□□□ 0.78
SRSF1-204ENST00000581979 FHOD3Q2V2M9 1422 aa19.94■□□□□ 0.78
SRSF1-204ENST00000581979 RANGAP1P46060 587 aaPredicted RBP19.93■□□□□ 0.78
SRSF1-204ENST00000581979 ARID3CA6NKF2 412 aa19.93■□□□□ 0.78
SRSF1-204ENST00000581979 NUP153P49790 1475 aaKnown RBP19.91■□□□□ 0.78
SRSF1-204ENST00000581979 KDM4FA0A1W2PPD8 638 aa19.87■□□□□ 0.77
SRSF1-204ENST00000581979 ABCA9Q8IUA7 1624 aa19.86■□□□□ 0.77
SRSF1-204ENST00000581979 CLIP1P30622 1438 aa19.85■□□□□ 0.77
SRSF1-204ENST00000581979 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.83■□□□□ 0.77
SRSF1-204ENST00000581979 HNRNPUL2Q1KMD3 747 aaKnown RBP19.83■□□□□ 0.77
SRSF1-204ENST00000581979 ARAP3Q8WWN8 1544 aa19.8■□□□□ 0.76
SRSF1-204ENST00000581979 PHLDB1Q86UU1 1377 aa19.79■□□□□ 0.76
SRSF1-204ENST00000581979 ARHGAP35Q9NRY4 1499 aa19.78■□□□□ 0.76
SRSF1-204ENST00000581979 PLEKHD1A6NEE1 506 aa19.78■□□□□ 0.76
SRSF1-204ENST00000581979 FMN1Q68DA7 1419 aa19.76■□□□□ 0.75
SRSF1-204ENST00000581979 NEO1Q92859 1461 aa19.75■□□□□ 0.75
SRSF1-204ENST00000581979 ADGRL1O94910 1474 aa19.74■□□□□ 0.75
SRSF1-204ENST00000581979 CDK13Q14004 1512 aaKnown RBP19.71■□□□□ 0.75
SRSF1-204ENST00000581979 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.69■□□□□ 0.744e-20■□□□□ 9.3
SRSF1-204ENST00000581979 HECW1Q76N89 1606 aa19.69■□□□□ 0.74
SRSF1-204ENST00000581979 VPS8Q8N3P4 1428 aa19.67■□□□□ 0.74
SRSF1-204ENST00000581979 TTC37Q6PGP7 1564 aa19.65■□□□□ 0.74
SRSF1-204ENST00000581979 RAPGEF3O95398 923 aa19.65■□□□□ 0.74
SRSF1-204ENST00000581979 FANCAO15360 1455 aa19.63■□□□□ 0.73
SRSF1-204ENST00000581979 FRMPD1Q5SYB0 1578 aa19.63■□□□□ 0.73
SRSF1-204ENST00000581979 ATP1B4Q9UN42 357 aaPredicted RBP19.62■□□□□ 0.73
SRSF1-204ENST00000581979 CFAP74Q9C0B2 1584 aa19.62■□□□□ 0.73
SRSF1-204ENST00000581979 CDK11AQ9UQ88 783 aaPredicted RBP19.62■□□□□ 0.73
SRSF1-204ENST00000581979 AKNAQ7Z591 1439 aa19.62■□□□□ 0.73
SRSF1-204ENST00000581979 PLCH2O75038 1416 aa19.59■□□□□ 0.73
SRSF1-204ENST00000581979 DENND4BO75064 1496 aaPredicted RBP19.58■□□□□ 0.73
SRSF1-204ENST00000581979 LRRIQ1Q96JM4 1722 aa19.57■□□□□ 0.72
SRSF1-204ENST00000581979 RICTORQ6R327 1708 aa19.57■□□□□ 0.72
SRSF1-204ENST00000581979 CASKIN1Q8WXD9 1431 aa19.57■□□□□ 0.72
SRSF1-204ENST00000581979 TROQ12816 1431 aaPredicted RBP19.56■□□□□ 0.72
SRSF1-204ENST00000581979 PCF11O94913 1555 aaKnown RBP19.54■□□□□ 0.72
SRSF1-204ENST00000581979 KIF14Q15058 1648 aa19.53■□□□□ 0.72
SRSF1-204ENST00000581979 PPARGC1BQ86YN6 1023 aaKnown RBP19.53■□□□□ 0.72
SRSF1-204ENST00000581979 CCDC18Q5T9S5 1454 aa19.53■□□□□ 0.72
SRSF1-204ENST00000581979 MYO5CQ9NQX4 1742 aa19.52■□□□□ 0.72
SRSF1-204ENST00000581979 ZMYM4Q5VZL5 1548 aa19.52■□□□□ 0.71
SRSF1-204ENST00000581979 ARHGEF40Q8TER5 1519 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms