RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 KIF27Q86VH2 1401 aa22.66■■□□□ 1.22
CSNK1D-220ENST00000581737 FAM69CQ0P6D2 419 aa22.66■■□□□ 1.22
CSNK1D-220ENST00000581737 ABCC10Q5T3U5 1492 aa22.63■■□□□ 1.21
CSNK1D-220ENST00000581737 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
CSNK1D-220ENST00000581737 RUSC2Q8N2Y8 1516 aa22.61■■□□□ 1.21
CSNK1D-220ENST00000581737 ADCY10Q96PN6 1610 aa22.56■■□□□ 1.2
CSNK1D-220ENST00000581737 MAPKBP1O60336 1514 aa22.56■■□□□ 1.2
CSNK1D-220ENST00000581737 DIP2BQ9P265 1576 aa22.55■■□□□ 1.2
CSNK1D-220ENST00000581737 KDM4FA0A1W2PPD8 638 aa22.54■■□□□ 1.2
CSNK1D-220ENST00000581737 NPM1P06748 294 aaKnown RBP eCLIP22.53■■□□□ 1.2
CSNK1D-220ENST00000581737 CUL7Q14999 1698 aa22.51■■□□□ 1.19
CSNK1D-220ENST00000581737 IGF1RP08069 1367 aa22.46■■□□□ 1.19
CSNK1D-220ENST00000581737 EEA1Q15075 1411 aa22.45■■□□□ 1.18
CSNK1D-220ENST00000581737 KIAA0586Q9BVV6 1533 aa22.44■■□□□ 1.18
CSNK1D-220ENST00000581737 KDM6BO15054 1643 aa22.42■■□□□ 1.18
CSNK1D-220ENST00000581737 TTBK1Q5TCY1 1321 aaPredicted RBP22.37■■□□□ 1.17
CSNK1D-220ENST00000581737 CARMIL1Q5VZK9 1371 aa22.37■■□□□ 1.17
CSNK1D-220ENST00000581737 TSPOAP1O95153 1857 aa22.36■■□□□ 1.17
CSNK1D-220ENST00000581737 PTPRGP23470 1445 aa22.33■■□□□ 1.17
CSNK1D-220ENST00000581737 RAPGEF2Q9Y4G8 1499 aa22.28■■□□□ 1.16
CSNK1D-220ENST00000581737 CSRNP3Q8WYN3 585 aa22.28■■□□□ 1.16
CSNK1D-220ENST00000581737 ABCC2Q92887 1545 aa22.26■■□□□ 1.15
CSNK1D-220ENST00000581737 ILDR1Q86SU0 546 aaPredicted RBP22.26■■□□□ 1.15
CSNK1D-220ENST00000581737 PRXQ9BXM0 1461 aa22.26■■□□□ 1.15
CSNK1D-220ENST00000581737 ASXL2Q76L83 1435 aa22.25■■□□□ 1.15
CSNK1D-220ENST00000581737 TNIKQ9UKE5 1360 aa22.25■■□□□ 1.15
CSNK1D-220ENST00000581737 PPRC1Q5VV67 1664 aaKnown RBP22.23■■□□□ 1.15
CSNK1D-220ENST00000581737 COL17A1Q9UMD9 1497 aaPredicted RBP22.23■■□□□ 1.15
CSNK1D-220ENST00000581737 FAM9AQ8IZU1 332 aaPredicted RBP22.22■■□□□ 1.15
CSNK1D-220ENST00000581737 GLI2P10070 1586 aa22.19■■□□□ 1.14
CSNK1D-220ENST00000581737 KIF21BO75037 1637 aa22.18■■□□□ 1.14
CSNK1D-220ENST00000581737 ADGRL1O94910 1474 aa22.18■■□□□ 1.14
CSNK1D-220ENST00000581737 PLB1Q6P1J6 1458 aa22.18■■□□□ 1.14
CSNK1D-220ENST00000581737 CARMIL2Q6F5E8 1435 aa22.18■■□□□ 1.14
CSNK1D-220ENST00000581737 DISP1Q96F81 1524 aa22.16■■□□□ 1.14
CSNK1D-220ENST00000581737 UHRF1BP1LA0JNW5 1464 aa22.15■■□□□ 1.14
CSNK1D-220ENST00000581737 UACAQ9BZF9 1416 aa22.15■■□□□ 1.14
CSNK1D-220ENST00000581737 IQGAP2Q13576 1575 aa22.14■■□□□ 1.13
CSNK1D-220ENST00000581737 EPRSP07814 1512 aaKnown RBP22.12■■□□□ 1.13
CSNK1D-220ENST00000581737 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
CSNK1D-220ENST00000581737 KDM5BQ9UGL1 1544 aa22.09■■□□□ 1.13
CSNK1D-220ENST00000581737 GOLGA3Q08378 1498 aa22.06■■□□□ 1.12
CSNK1D-220ENST00000581737 MAP3K4Q9Y6R4 1608 aa22.06■■□□□ 1.12
CSNK1D-220ENST00000581737 ZCCHC11Q5TAX3 1644 aaKnown RBP22.02■■□□□ 1.11
CSNK1D-220ENST00000581737 UGGT2Q9NYU1 1516 aa22.01■■□□□ 1.11
CSNK1D-220ENST00000581737 HECW2Q9P2P5 1572 aa22■■□□□ 1.11
CSNK1D-220ENST00000581737 KIAA0556O60303 1618 aa21.98■■□□□ 1.11
CSNK1D-220ENST00000581737 TEX14Q8IWB6 1497 aa21.97■■□□□ 1.11
CSNK1D-220ENST00000581737 WDR7Q9Y4E6 1490 aa21.94■■□□□ 1.1
CSNK1D-220ENST00000581737 UBTFP17480 764 aaKnown RBP21.92■■□□□ 1.1
CSNK1D-220ENST00000581737 KCNH8Q96L42 1107 aa21.88■■□□□ 1.09
CSNK1D-220ENST00000581737 CD109Q6YHK3 1445 aa21.87■■□□□ 1.09
CSNK1D-220ENST00000581737 EHMT2Q96KQ7 1210 aa21.86■■□□□ 1.09
CSNK1D-220ENST00000581737 MAGI3Q5TCQ9 1506 aa21.84■■□□□ 1.09
CSNK1D-220ENST00000581737 ABCA8O94911 1581 aa21.82■■□□□ 1.08
CSNK1D-220ENST00000581737 SAMD9Q5K651 1589 aa21.82■■□□□ 1.08
CSNK1D-220ENST00000581737 EFCAB5A4FU69 1503 aa21.81■■□□□ 1.08
CSNK1D-220ENST00000581737 ARID3CA6NKF2 412 aa21.77■■□□□ 1.08
CSNK1D-220ENST00000581737 CFAP43Q8NDM7 1665 aa21.76■■□□□ 1.07
CSNK1D-220ENST00000581737 RANGAP1P46060 587 aaPredicted RBP21.71■■□□□ 1.07
CSNK1D-220ENST00000581737 ARAP3Q8WWN8 1544 aa21.69■■□□□ 1.06
CSNK1D-220ENST00000581737 P3H3Q8IVL6 736 aa21.68■■□□□ 1.06
CSNK1D-220ENST00000581737 ATP10BO94823 1461 aa21.68■■□□□ 1.06
CSNK1D-220ENST00000581737 ARHGAP35Q9NRY4 1499 aa21.65■■□□□ 1.06
CSNK1D-220ENST00000581737 RAPGEF3O95398 923 aa21.65■■□□□ 1.06
CSNK1D-220ENST00000581737 CLIP1P30622 1438 aa21.64■■□□□ 1.06
CSNK1D-220ENST00000581737 FHOD3Q2V2M9 1422 aa21.64■■□□□ 1.06
CSNK1D-220ENST00000581737 LOC105371045A0A1W2PR82 267 aa21.63■■□□□ 1.05
CSNK1D-220ENST00000581737 PTPRMP28827 1452 aa21.63■■□□□ 1.05
CSNK1D-220ENST00000581737 FBXO41Q8TF61 875 aa21.61■■□□□ 1.05
CSNK1D-220ENST00000581737 CEP162Q5TB80 1403 aa21.6■■□□□ 1.05
CSNK1D-220ENST00000581737 ADAMTSL3P82987 1691 aa21.59■■□□□ 1.05
CSNK1D-220ENST00000581737 FMN1Q68DA7 1419 aa21.58■■□□□ 1.05
CSNK1D-220ENST00000581737 ABCA9Q8IUA7 1624 aa21.58■■□□□ 1.04
CSNK1D-220ENST00000581737 RAPGEF6Q8TEU7 1601 aa21.55■■□□□ 1.04
CSNK1D-220ENST00000581737 FRMPD1Q5SYB0 1578 aa21.54■■□□□ 1.04
CSNK1D-220ENST00000581737 PHLDB1Q86UU1 1377 aa21.52■■□□□ 1.04
CSNK1D-220ENST00000581737 NEO1Q92859 1461 aa21.5■■□□□ 1.03
CSNK1D-220ENST00000581737 MADDQ8WXG6 1647 aa21.49■■□□□ 1.03
CSNK1D-220ENST00000581737 LMTK3Q96Q04 1460 aa21.49■■□□□ 1.03
CSNK1D-220ENST00000581737 BCORL1Q5H9F3 1711 aa21.48■■□□□ 1.03
CSNK1D-220ENST00000581737 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.47■■□□□ 1.03
CSNK1D-220ENST00000581737 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
CSNK1D-220ENST00000581737 ARID4BQ4LE39 1312 aaPredicted RBP21.47■■□□□ 1.03
CSNK1D-220ENST00000581737 HECW1Q76N89 1606 aa21.47■■□□□ 1.03
CSNK1D-220ENST00000581737 NUP153P49790 1475 aaKnown RBP21.46■■□□□ 1.03
CSNK1D-220ENST00000581737 PCF11O94913 1555 aaKnown RBP21.46■■□□□ 1.03
CSNK1D-220ENST00000581737 FYCO1Q9BQS8 1478 aa21.41■■□□□ 1.02
CSNK1D-220ENST00000581737 CASKIN1Q8WXD9 1431 aa21.41■■□□□ 1.02
CSNK1D-220ENST00000581737 HSPA2P54652 639 aa21.41■■□□□ 1.02
CSNK1D-220ENST00000581737 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.01
CSNK1D-220ENST00000581737 ARHGEF40Q8TER5 1519 aa21.39■■□□□ 1.01
CSNK1D-220ENST00000581737 DENND4BO75064 1496 aaPredicted RBP21.37■■□□□ 1.01
CSNK1D-220ENST00000581737 RIMS1Q86UR5 1692 aaKnown RBP21.37■■□□□ 1.01
CSNK1D-220ENST00000581737 AKNAQ7Z591 1439 aa21.37■■□□□ 1.01
CSNK1D-220ENST00000581737 SIGLEC1Q9BZZ2 1709 aa21.36■■□□□ 1.01
CSNK1D-220ENST00000581737 CCDC18Q5T9S5 1454 aa21.35■■□□□ 1.01
CSNK1D-220ENST00000581737 ATP1B4Q9UN42 357 aaPredicted RBP21.35■■□□□ 1.01
CSNK1D-220ENST00000581737 VPS8Q8N3P4 1428 aa21.34■■□□□ 1.01
CSNK1D-220ENST00000581737 YEATS2Q9ULM3 1422 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms