RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 SHROOM2Q13796 1616 aa26.32■■□□□ 1.8
CCDC57-213ENST00000581625 CTTNBP2Q8WZ74 1663 aa26.31■■□□□ 1.8
CCDC57-213ENST00000581625 IQGAP2Q13576 1575 aa26.3■■□□□ 1.8
CCDC57-213ENST00000581625 GOLGA3Q08378 1498 aa26.28■■□□□ 1.8
CCDC57-213ENST00000581625 ARHGEF11O15085 1522 aa26.26■■□□□ 1.79
CCDC57-213ENST00000581625 RIMBP3CA6NJZ7 1639 aa26.21■■□□□ 1.79
CCDC57-213ENST00000581625 RIMBP3BA6NNM3 1639 aa26.21■■□□□ 1.79
CCDC57-213ENST00000581625 RIMBP3Q9UFD9 1639 aa26.21■■□□□ 1.79
CCDC57-213ENST00000581625 JPH4Q96JJ6 628 aa26.19■■□□□ 1.78
CCDC57-213ENST00000581625 UGGT2Q9NYU1 1516 aa26.16■■□□□ 1.78
CCDC57-213ENST00000581625 PRG4Q92954 1404 aaPredicted RBP26.15■■□□□ 1.78
CCDC57-213ENST00000581625 CARMIL2Q6F5E8 1435 aa26.1■■□□□ 1.77
CCDC57-213ENST00000581625 ERCC6L2Q5T890 1561 aa26.1■■□□□ 1.77
CCDC57-213ENST00000581625 UBTFP17480 764 aaKnown RBP26.07■■□□□ 1.76
CCDC57-213ENST00000581625 ARAP1Q96P48 1450 aa26.06■■□□□ 1.76
CCDC57-213ENST00000581625 KIAA0556O60303 1618 aa26.05■■□□□ 1.76
CCDC57-213ENST00000581625 DISP1Q96F81 1524 aa26.04■■□□□ 1.76
CCDC57-213ENST00000581625 EHMT2Q96KQ7 1210 aa26.02■■□□□ 1.76
CCDC57-213ENST00000581625 SAMD9Q5K651 1589 aa25.99■■□□□ 1.75
CCDC57-213ENST00000581625 EFCAB5A4FU69 1503 aa25.98■■□□□ 1.75
CCDC57-213ENST00000581625 TNIKQ9UKE5 1360 aa25.96■■□□□ 1.75
CCDC57-213ENST00000581625 CYB5RLQ6IPT4 315 aa25.89■■□□□ 1.74
CCDC57-213ENST00000581625 PTPRGP23470 1445 aa25.88■■□□□ 1.73
CCDC57-213ENST00000581625 RANGAP1P46060 587 aaPredicted RBP25.82■■□□□ 1.72
CCDC57-213ENST00000581625 ARHGAP35Q9NRY4 1499 aa25.81■■□□□ 1.72
CCDC57-213ENST00000581625 FHOD3Q2V2M9 1422 aa25.79■■□□□ 1.72
CCDC57-213ENST00000581625 CLIP1P30622 1438 aa25.78■■□□□ 1.72
CCDC57-213ENST00000581625 LOC105371045A0A1W2PR82 267 aa25.77■■□□□ 1.72
CCDC57-213ENST00000581625 CEP162Q5TB80 1403 aa25.75■■□□□ 1.71
CCDC57-213ENST00000581625 UACAQ9BZF9 1416 aa25.75■■□□□ 1.71
CCDC57-213ENST00000581625 P3H3Q8IVL6 736 aa25.75■■□□□ 1.71
CCDC57-213ENST00000581625 ADCY10Q96PN6 1610 aa25.74■■□□□ 1.71
CCDC57-213ENST00000581625 UHRF1BP1LA0JNW5 1464 aa25.74■■□□□ 1.71
CCDC57-213ENST00000581625 ABCC2Q92887 1545 aa25.73■■□□□ 1.71
CCDC57-213ENST00000581625 TTBK1Q5TCY1 1321 aaPredicted RBP25.73■■□□□ 1.71
CCDC57-213ENST00000581625 ABCA8O94911 1581 aa25.72■■□□□ 1.71
CCDC57-213ENST00000581625 FMN1Q68DA7 1419 aa25.71■■□□□ 1.71
CCDC57-213ENST00000581625 PLB1Q6P1J6 1458 aa25.7■■□□□ 1.7
CCDC57-213ENST00000581625 RAPGEF6Q8TEU7 1601 aa25.66■■□□□ 1.7
CCDC57-213ENST00000581625 KDM5BQ9UGL1 1544 aa25.6■■□□□ 1.69
CCDC57-213ENST00000581625 NPM1P06748 294 aaKnown RBP eCLIP25.58■■□□□ 1.69
CCDC57-213ENST00000581625 MAPKBP1O60336 1514 aa25.57■■□□□ 1.68
CCDC57-213ENST00000581625 HECW1Q76N89 1606 aa25.56■■□□□ 1.68
CCDC57-213ENST00000581625 ZCCHC11Q5TAX3 1644 aaKnown RBP25.55■■□□□ 1.68
CCDC57-213ENST00000581625 NUP153P49790 1475 aaKnown RBP25.54■■□□□ 1.68
CCDC57-213ENST00000581625 PCF11O94913 1555 aaKnown RBP25.52■■□□□ 1.68
CCDC57-213ENST00000581625 CASKIN1Q8WXD9 1431 aa25.51■■□□□ 1.67
CCDC57-213ENST00000581625 FYCO1Q9BQS8 1478 aa25.51■■□□□ 1.67
CCDC57-213ENST00000581625 ATP10BO94823 1461 aa25.46■■□□□ 1.67
CCDC57-213ENST00000581625 VPS8Q8N3P4 1428 aa25.44■■□□□ 1.66
CCDC57-213ENST00000581625 ASXL2Q76L83 1435 aa25.43■■□□□ 1.66
CCDC57-213ENST00000581625 EPRSP07814 1512 aaKnown RBP25.42■■□□□ 1.66
CCDC57-213ENST00000581625 CCDC18Q5T9S5 1454 aa25.42■■□□□ 1.66
CCDC57-213ENST00000581625 WDR7Q9Y4E6 1490 aa25.4■■□□□ 1.66
CCDC57-213ENST00000581625 CDK13Q14004 1512 aaKnown RBP25.38■■□□□ 1.65
CCDC57-213ENST00000581625 ATP1B4Q9UN42 357 aaPredicted RBP25.37■■□□□ 1.65
CCDC57-213ENST00000581625 ABCC10Q5T3U5 1492 aa25.36■■□□□ 1.65
CCDC57-213ENST00000581625 ARID3CA6NKF2 412 aa25.36■■□□□ 1.65
CCDC57-213ENST00000581625 DIP2BQ9P265 1576 aa25.35■■□□□ 1.65
CCDC57-213ENST00000581625 LRRIQ1Q96JM4 1722 aa25.34■■□□□ 1.65
CCDC57-213ENST00000581625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.34■■□□□ 1.65
CCDC57-213ENST00000581625 HNRNPUL2Q1KMD3 747 aaKnown RBP25.34■■□□□ 1.65
CCDC57-213ENST00000581625 GLI2P10070 1586 aa25.28■■□□□ 1.64
CCDC57-213ENST00000581625 CDK11AQ9UQ88 783 aaPredicted RBP25.28■■□□□ 1.64
CCDC57-213ENST00000581625 KIF13AQ9H1H9 1805 aa25.27■■□□□ 1.64
CCDC57-213ENST00000581625 PLEKHD1A6NEE1 506 aa25.26■■□□□ 1.63
CCDC57-213ENST00000581625 TRHP20396 242 aaPredicted RBP25.26■■□□□ 1.63
CCDC57-213ENST00000581625 CFAP43Q8NDM7 1665 aa25.25■■□□□ 1.63
CCDC57-213ENST00000581625 TROQ12816 1431 aaPredicted RBP25.21■■□□□ 1.63
CCDC57-213ENST00000581625 FAM69CQ0P6D2 419 aa25.21■■□□□ 1.63
CCDC57-213ENST00000581625 MAP3K1Q13233 1512 aa25.21■■□□□ 1.63
CCDC57-213ENST00000581625 TIAM1Q13009 1591 aa25.2■■□□□ 1.62
CCDC57-213ENST00000581625 KIF14Q15058 1648 aa25.19■■□□□ 1.62
CCDC57-213ENST00000581625 ABCA9Q8IUA7 1624 aa25.18■■□□□ 1.62
CCDC57-213ENST00000581625 MAP3K4Q9Y6R4 1608 aa25.18■■□□□ 1.62
CCDC57-213ENST00000581625 MAGI3Q5TCQ9 1506 aa25.17■■□□□ 1.62
CCDC57-213ENST00000581625 EHBP1L1Q8N3D4 1523 aa25.17■■□□□ 1.62
CCDC57-213ENST00000581625 KCNH8Q96L42 1107 aa25.15■■□□□ 1.62
CCDC57-213ENST00000581625 MTUS2Q5JR59 1369 aa25.13■■□□□ 1.61
CCDC57-213ENST00000581625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.11■■□□□ 1.61
CCDC57-213ENST00000581625 APLP2Q06481 763 aa25.09■■□□□ 1.61
CCDC57-213ENST00000581625 TTC37Q6PGP7 1564 aa25.09■■□□□ 1.61
CCDC57-213ENST00000581625 CD109Q6YHK3 1445 aa25.08■■□□□ 1.61
CCDC57-213ENST00000581625 LRRC9Q6ZRR7 1453 aa25.07■■□□□ 1.6
CCDC57-213ENST00000581625 TEX14Q8IWB6 1497 aa25.06■■□□□ 1.6
CCDC57-213ENST00000581625 PPRC1Q5VV67 1664 aaKnown RBP25.04■■□□□ 1.6
CCDC57-213ENST00000581625 TSPOAP1O95153 1857 aa25.02■■□□□ 1.6
CCDC57-213ENST00000581625 SUPT6HQ7KZ85 1726 aaKnown RBP25.01■■□□□ 1.59
CCDC57-213ENST00000581625 ARAP3Q8WWN8 1544 aa25.01■■□□□ 1.59
CCDC57-213ENST00000581625 MYO5CQ9NQX4 1742 aa25■■□□□ 1.59
CCDC57-213ENST00000581625 CFAP74Q9C0B2 1584 aa24.97■■□□□ 1.59
CCDC57-213ENST00000581625 PLCH2O75038 1416 aa24.96■■□□□ 1.59
CCDC57-213ENST00000581625 PREX2Q70Z35 1606 aa24.96■■□□□ 1.59
CCDC57-213ENST00000581625 NCOA2Q15596 1464 aa24.95■■□□□ 1.58
CCDC57-213ENST00000581625 NEO1Q92859 1461 aa24.94■■□□□ 1.58
CCDC57-213ENST00000581625 KANK4Q5T7N3 995 aaPredicted RBP24.93■■□□□ 1.58
CCDC57-213ENST00000581625 ITSN2Q9NZM3 1697 aa24.92■■□□□ 1.58
CCDC57-213ENST00000581625 FANCAO15360 1455 aa24.92■■□□□ 1.58
CCDC57-213ENST00000581625 PHLDB1Q86UU1 1377 aa24.92■■□□□ 1.58
CCDC57-213ENST00000581625 CDC42BPAQ5VT25 1732 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms