RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 NISCHQ9Y2I1 1504 aa38.22■■■■□ 3.71
CCDC57-213ENST00000581625 CCDC180Q9P1Z9 1646 aa33.9■■■■□ 3.02
CCDC57-213ENST00000581625 ABCC9O60706 1549 aa32.69■■■□□ 2.82
CCDC57-213ENST00000581625 ZCCHC6Q5VYS8 1495 aaKnown RBP31.95■■■□□ 2.7
CCDC57-213ENST00000581625 NACADO15069 1562 aa31.76■■■□□ 2.67
CCDC57-213ENST00000581625 MYO15BQ96JP2 1530 aa31.74■■■□□ 2.67
CCDC57-213ENST00000581625 DCAF1Q9Y4B6 1507 aa31.71■■■□□ 2.67
CCDC57-213ENST00000581625 RB1CC1Q8TDY2 1594 aa31.7■■■□□ 2.67
CCDC57-213ENST00000581625 DCAF8L2P0C7V8 631 aa31.62■■■□□ 2.65
CCDC57-213ENST00000581625 UNC13AQ9UPW8 1703 aa30.92■■■□□ 2.54
CCDC57-213ENST00000581625 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
CCDC57-213ENST00000581625 BICRAQ9NZM4 1560 aa30.67■■■□□ 2.5
CCDC57-213ENST00000581625 SHROOM4Q9ULL8 1493 aa30.54■■■□□ 2.48
CCDC57-213ENST00000581625 PABPN1Q86U42 306 aaKnown RBP eCLIP30.53■■■□□ 2.48
CCDC57-213ENST00000581625 EIF4G1Q04637 1599 aaKnown RBP29.86■■■□□ 2.37
CCDC57-213ENST00000581625 CECR2Q9BXF3 1484 aa29.66■■■□□ 2.34
CCDC57-213ENST00000581625 BAZ1AQ9NRL2 1556 aaPredicted RBP29.64■■■□□ 2.34
CCDC57-213ENST00000581625 CC2D2AQ9P2K1 1620 aa29.63■■■□□ 2.33
CCDC57-213ENST00000581625 SMARCA4P51532 1647 aa29.59■■■□□ 2.33
CCDC57-213ENST00000581625 DNAJC5BQ9UF47 199 aa29.56■■■□□ 2.32
CCDC57-213ENST00000581625 MROH2BQ7Z745 1585 aa29.42■■■□□ 2.3
CCDC57-213ENST00000581625 SMARCA2P51531 1590 aa29.36■■■□□ 2.29
CCDC57-213ENST00000581625 PEG3Q9GZU2 1588 aa29.35■■■□□ 2.29
CCDC57-213ENST00000581625 ATAD2BQ9ULI0 1458 aa29.32■■■□□ 2.28
CCDC57-213ENST00000581625 NCAPD3P42695 1498 aa29.26■■■□□ 2.27
CCDC57-213ENST00000581625 RSF1Q96T23 1441 aaPredicted RBP29.21■■■□□ 2.27
CCDC57-213ENST00000581625 HMGXB3Q12766 1538 aa29.21■■■□□ 2.27
CCDC57-213ENST00000581625 BAZ1BQ9UIG0 1483 aaKnown RBP29.12■■■□□ 2.25
CCDC57-213ENST00000581625 WIZO95785 1651 aa29.12■■■□□ 2.25
CCDC57-213ENST00000581625 TOP2AP11388 1531 aaKnown RBP28.9■■■□□ 2.22
CCDC57-213ENST00000581625 SUPT5HO00267 1087 aaKnown RBP28.64■■■□□ 2.18
CCDC57-213ENST00000581625 CCDC88BA6NC98 1476 aa28.48■■■□□ 2.15
CCDC57-213ENST00000581625 LAMC3Q9Y6N6 1575 aa28.48■■■□□ 2.15
CCDC57-213ENST00000581625 CADPSQ9ULU8 1353 aa28.41■■■□□ 2.14
CCDC57-213ENST00000581625 NESP48681 1621 aa28.38■■■□□ 2.13
CCDC57-213ENST00000581625 CFTRP13569 1480 aa28.34■■■□□ 2.13
CCDC57-213ENST00000581625 PDS5BQ9NTI5 1447 aa28.25■■■□□ 2.11
CCDC57-213ENST00000581625 ERCC6Q03468 1493 aa28.21■■■□□ 2.11
CCDC57-213ENST00000581625 PRDM2Q13029 1718 aa28.2■■■□□ 2.1
CCDC57-213ENST00000581625 KIF21AQ7Z4S6 1674 aa28.1■■■□□ 2.09
CCDC57-213ENST00000581625 FANCD2Q9BXW9 1451 aa28.1■■■□□ 2.09
CCDC57-213ENST00000581625 CEP164Q9UPV0 1460 aa28.06■■■□□ 2.08
CCDC57-213ENST00000581625 THOC2Q8NI27 1593 aaKnown RBP27.97■■■□□ 2.07
CCDC57-213ENST00000581625 MRC2Q9UBG0 1479 aa27.94■■■□□ 2.06
CCDC57-213ENST00000581625 WDR62O43379 1518 aa27.85■■■□□ 2.05
CCDC57-213ENST00000581625 CUX2O14529 1486 aa27.83■■■□□ 2.04
CCDC57-213ENST00000581625 URB2Q14146 1524 aaKnown RBP27.77■■■□□ 2.04
CCDC57-213ENST00000581625 ABCC8Q09428 1581 aa27.76■■■□□ 2.03
CCDC57-213ENST00000581625 DNMBPQ6XZF7 1577 aa27.72■■■□□ 2.03
CCDC57-213ENST00000581625 TOPBP1Q92547 1522 aa27.68■■■□□ 2.02
CCDC57-213ENST00000581625 CUX1P39880 1505 aa27.59■■■□□ 2.01
CCDC57-213ENST00000581625 WRNQ14191 1432 aaPredicted RBP eCLIP27.58■■■□□ 2
CCDC57-213ENST00000581625 TOP2BQ02880 1626 aa27.5■■□□□ 1.99
CCDC57-213ENST00000581625 BIVM-ERCC5R4GMW8 1640 aa27.5■■□□□ 1.99
CCDC57-213ENST00000581625 POLA1P09884 1462 aaPredicted RBP27.48■■□□□ 1.99
CCDC57-213ENST00000581625 SYNJ1O43426 1573 aa27.47■■□□□ 1.99
CCDC57-213ENST00000581625 FGD5Q6ZNL6 1462 aa27.46■■□□□ 1.99
CCDC57-213ENST00000581625 IFT140Q96RY7 1462 aa27.45■■□□□ 1.99
CCDC57-213ENST00000581625 TARBP1Q13395 1621 aaKnown RBP27.36■■□□□ 1.97
CCDC57-213ENST00000581625 SOGA1O94964 1423 aa27.33■■□□□ 1.97
CCDC57-213ENST00000581625 RAD54L2Q9Y4B4 1467 aa27.29■■□□□ 1.96
CCDC57-213ENST00000581625 WDR97A6NE52 1622 aa27.27■■□□□ 1.96
CCDC57-213ENST00000581625 ABCA10Q8WWZ4 1543 aa27.24■■□□□ 1.95
CCDC57-213ENST00000581625 ZNF608Q9ULD9 1512 aaPredicted RBP27.22■■□□□ 1.95
CCDC57-213ENST00000581625 EIF4G3O43432 1585 aaKnown RBP27.22■■□□□ 1.95
CCDC57-213ENST00000581625 ABCA5Q8WWZ7 1642 aa27.11■■□□□ 1.93
CCDC57-213ENST00000581625 TDRD9Q8NDG6 1382 aaKnown RBP27.1■■□□□ 1.93
CCDC57-213ENST00000581625 AQRO60306 1485 aaKnown RBP eCLIP27.1■■□□□ 1.932e-6■■□□□ 14.2
CCDC57-213ENST00000581625 TRIM41Q8WV44 630 aa27.08■■□□□ 1.93
CCDC57-213ENST00000581625 GAPVD1Q14C86 1478 aa27.06■■□□□ 1.92
CCDC57-213ENST00000581625 GRIN2BQ13224 1484 aa27.02■■□□□ 1.92
CCDC57-213ENST00000581625 PBRM1Q86U86 1689 aa27■■□□□ 1.91
CCDC57-213ENST00000581625 KIF27Q86VH2 1401 aa26.98■■□□□ 1.91
CCDC57-213ENST00000581625 MAGI1Q96QZ7 1491 aaPredicted RBP26.95■■□□□ 1.91
CCDC57-213ENST00000581625 CHIC1Q5VXU3 224 aa26.95■■□□□ 1.9
CCDC57-213ENST00000581625 ERICH3Q5RHP9 1530 aa26.94■■□□□ 1.9
CCDC57-213ENST00000581625 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
CCDC57-213ENST00000581625 ADAMTS12P58397 1594 aa26.84■■□□□ 1.89
CCDC57-213ENST00000581625 SYNJ2O15056 1496 aa26.81■■□□□ 1.88
CCDC57-213ENST00000581625 CUL7Q14999 1698 aa26.79■■□□□ 1.88
CCDC57-213ENST00000581625 FHAD1B1AJZ9 1412 aa26.78■■□□□ 1.88
CCDC57-213ENST00000581625 CHD1O14646 1710 aa26.76■■□□□ 1.88
CCDC57-213ENST00000581625 EEA1Q15075 1411 aa26.75■■□□□ 1.87
CCDC57-213ENST00000581625 IGF1RP08069 1367 aa26.75■■□□□ 1.87
CCDC57-213ENST00000581625 RUSC2Q8N2Y8 1516 aa26.73■■□□□ 1.87
CCDC57-213ENST00000581625 CHMP7Q8WUX9 453 aaPredicted RBP26.7■■□□□ 1.86
CCDC57-213ENST00000581625 GRIN2AQ12879 1464 aa26.68■■□□□ 1.86
CCDC57-213ENST00000581625 FBLN2P98095 1184 aa26.67■■□□□ 1.86
CCDC57-213ENST00000581625 OSCARQ8IYS5 282 aa26.63■■□□□ 1.85
CCDC57-213ENST00000581625 CARMIL1Q5VZK9 1371 aa26.62■■□□□ 1.85
CCDC57-213ENST00000581625 NUP160Q12769 1436 aa26.55■■□□□ 1.84
CCDC57-213ENST00000581625 RAPGEF2Q9Y4G8 1499 aa26.55■■□□□ 1.84
CCDC57-213ENST00000581625 PRXQ9BXM0 1461 aa26.54■■□□□ 1.84
CCDC57-213ENST00000581625 CSRNP3Q8WYN3 585 aa26.53■■□□□ 1.84
CCDC57-213ENST00000581625 CEP170Q5SW79 1584 aa26.52■■□□□ 1.84
CCDC57-213ENST00000581625 CLASP1Q7Z460 1538 aa26.52■■□□□ 1.84
CCDC57-213ENST00000581625 FAM9AQ8IZU1 332 aaPredicted RBP26.44■■□□□ 1.82
CCDC57-213ENST00000581625 KIF21BO75037 1637 aa26.43■■□□□ 1.82
CCDC57-213ENST00000581625 DNAJC5Q9H3Z4 198 aa26.42■■□□□ 1.82
CCDC57-213ENST00000581625 KIAA0586Q9BVV6 1533 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms