RNA–Protein interactions for RNA: ENST00000581438.5

ATG13-228, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-228ENST00000581438 KIAA0586Q9BVV6 1533 aa29.41■■■□□ 2.3
ATG13-228ENST00000581438 RAPGEF2Q9Y4G8 1499 aa29.41■■■□□ 2.3
ATG13-228ENST00000581438 PRG4Q92954 1404 aaPredicted RBP29.35■■■□□ 2.29
ATG13-228ENST00000581438 CHIC1Q5VXU3 224 aa29.33■■■□□ 2.29
ATG13-228ENST00000581438 ERCC6L2Q5T890 1561 aa29.33■■■□□ 2.29
ATG13-228ENST00000581438 EEA1Q15075 1411 aa29.3■■■□□ 2.28
ATG13-228ENST00000581438 CSRNP3Q8WYN3 585 aa29.27■■■□□ 2.28
ATG13-228ENST00000581438 PRXQ9BXM0 1461 aa29.25■■■□□ 2.27
ATG13-228ENST00000581438 IQGAP2Q13576 1575 aa29.22■■■□□ 2.27
ATG13-228ENST00000581438 CARMIL2Q6F5E8 1435 aa29.15■■■□□ 2.26
ATG13-228ENST00000581438 FAM9AQ8IZU1 332 aaPredicted RBP29.12■■■□□ 2.25
ATG13-228ENST00000581438 CTTNBP2Q8WZ74 1663 aa29.08■■■□□ 2.25
ATG13-228ENST00000581438 UGGT2Q9NYU1 1516 aa29.06■■■□□ 2.24
ATG13-228ENST00000581438 TNIKQ9UKE5 1360 aa29.03■■■□□ 2.24
ATG13-228ENST00000581438 PTPRGP23470 1445 aa29.03■■■□□ 2.24
ATG13-228ENST00000581438 TRHP20396 242 aaPredicted RBP29■■■□□ 2.23
ATG13-228ENST00000581438 DISP1Q96F81 1524 aa28.99■■■□□ 2.23
ATG13-228ENST00000581438 NPM1P06748 294 aaKnown RBP eCLIP28.95■■■□□ 2.22
ATG13-228ENST00000581438 GOLGA3Q08378 1498 aa28.95■■■□□ 2.22
ATG13-228ENST00000581438 TTBK1Q5TCY1 1321 aaPredicted RBP28.94■■■□□ 2.22
ATG13-228ENST00000581438 KIAA0556O60303 1618 aa28.93■■■□□ 2.22
ATG13-228ENST00000581438 KIF21BO75037 1637 aa28.93■■■□□ 2.22
ATG13-228ENST00000581438 ADCY10Q96PN6 1610 aa28.86■■■□□ 2.21
ATG13-228ENST00000581438 UACAQ9BZF9 1416 aa28.82■■■□□ 2.2
ATG13-228ENST00000581438 UHRF1BP1LA0JNW5 1464 aa28.78■■■□□ 2.2
ATG13-228ENST00000581438 UBTFP17480 764 aaKnown RBP28.77■■■□□ 2.2
ATG13-228ENST00000581438 MAPKBP1O60336 1514 aa28.74■■■□□ 2.19
ATG13-228ENST00000581438 ABCC2Q92887 1545 aa28.74■■■□□ 2.19
ATG13-228ENST00000581438 EHMT2Q96KQ7 1210 aa28.72■■■□□ 2.19
ATG13-228ENST00000581438 P3H3Q8IVL6 736 aa28.71■■■□□ 2.19
ATG13-228ENST00000581438 SAMD9Q5K651 1589 aa28.7■■■□□ 2.18
ATG13-228ENST00000581438 RANGAP1P46060 587 aaPredicted RBP28.69■■■□□ 2.18
ATG13-228ENST00000581438 PLB1Q6P1J6 1458 aa28.64■■■□□ 2.17
ATG13-228ENST00000581438 KDM5BQ9UGL1 1544 aa28.64■■■□□ 2.17
ATG13-228ENST00000581438 ABCC10Q5T3U5 1492 aa28.63■■■□□ 2.17
ATG13-228ENST00000581438 ABCA8O94911 1581 aa28.62■■■□□ 2.17
ATG13-228ENST00000581438 EFCAB5A4FU69 1503 aa28.61■■■□□ 2.17
ATG13-228ENST00000581438 FAM69CQ0P6D2 419 aa28.6■■■□□ 2.17
ATG13-228ENST00000581438 KIF13AQ9H1H9 1805 aa28.57■■■□□ 2.16
ATG13-228ENST00000581438 ASXL2Q76L83 1435 aa28.56■■■□□ 2.16
ATG13-228ENST00000581438 ZCCHC11Q5TAX3 1644 aaKnown RBP28.54■■■□□ 2.16
ATG13-228ENST00000581438 DIP2BQ9P265 1576 aa28.54■■■□□ 2.16
ATG13-228ENST00000581438 FHOD3Q2V2M9 1422 aa28.54■■■□□ 2.16
ATG13-228ENST00000581438 RAPGEF6Q8TEU7 1601 aa28.46■■■□□ 2.15
ATG13-228ENST00000581438 ARHGAP35Q9NRY4 1499 aa28.42■■■□□ 2.14
ATG13-228ENST00000581438 WDR7Q9Y4E6 1490 aa28.41■■■□□ 2.14
ATG13-228ENST00000581438 GLI2P10070 1586 aa28.41■■■□□ 2.14
ATG13-228ENST00000581438 ATP10BO94823 1461 aa28.4■■■□□ 2.14
ATG13-228ENST00000581438 EPRSP07814 1512 aaKnown RBP28.39■■■□□ 2.14
ATG13-228ENST00000581438 FMN1Q68DA7 1419 aa28.38■■■□□ 2.13
ATG13-228ENST00000581438 ARID3CA6NKF2 412 aa28.38■■■□□ 2.13
ATG13-228ENST00000581438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.35■■■□□ 2.13
ATG13-228ENST00000581438 HNRNPUL2Q1KMD3 747 aaKnown RBP28.35■■■□□ 2.13
ATG13-228ENST00000581438 NUP153P49790 1475 aaKnown RBP28.34■■■□□ 2.13
ATG13-228ENST00000581438 KCNH8Q96L42 1107 aa28.31■■■□□ 2.12
ATG13-228ENST00000581438 TSPOAP1O95153 1857 aa28.29■■■□□ 2.12
ATG13-228ENST00000581438 CLIP1P30622 1438 aa28.26■■■□□ 2.12
ATG13-228ENST00000581438 ATP1B4Q9UN42 357 aaPredicted RBP28.24■■■□□ 2.11
ATG13-228ENST00000581438 MAP3K4Q9Y6R4 1608 aa28.24■■■□□ 2.11
ATG13-228ENST00000581438 PLEKHD1A6NEE1 506 aa28.23■■■□□ 2.11
ATG13-228ENST00000581438 HECW1Q76N89 1606 aa28.21■■■□□ 2.11
ATG13-228ENST00000581438 TEX14Q8IWB6 1497 aa28.2■■■□□ 2.1
ATG13-228ENST00000581438 CFAP43Q8NDM7 1665 aa28.19■■■□□ 2.1
ATG13-228ENST00000581438 CD109Q6YHK3 1445 aa28.18■■■□□ 2.1
ATG13-228ENST00000581438 PPRC1Q5VV67 1664 aaKnown RBP28.16■■■□□ 2.1
ATG13-228ENST00000581438 CDK11AQ9UQ88 783 aaPredicted RBP28.13■■■□□ 2.09
ATG13-228ENST00000581438 KDM6BO15054 1643 aa28.13■■■□□ 2.09
ATG13-228ENST00000581438 CDK13Q14004 1512 aaKnown RBP28.13■■■□□ 2.09
ATG13-228ENST00000581438 MAGI3Q5TCQ9 1506 aa28.13■■■□□ 2.09
ATG13-228ENST00000581438 CASKIN1Q8WXD9 1431 aa28.11■■■□□ 2.09
ATG13-228ENST00000581438 LOC105371045A0A1W2PR82 267 aa28.11■■■□□ 2.09
ATG13-228ENST00000581438 CEP162Q5TB80 1403 aa28.1■■■□□ 2.09
ATG13-228ENST00000581438 ABCA9Q8IUA7 1624 aa28.08■■■□□ 2.09
ATG13-228ENST00000581438 PCF11O94913 1555 aaKnown RBP28.05■■■□□ 2.08
ATG13-228ENST00000581438 FYCO1Q9BQS8 1478 aa28.04■■■□□ 2.08
ATG13-228ENST00000581438 CCDC18Q5T9S5 1454 aa28.03■■■□□ 2.08
ATG13-228ENST00000581438 PHLDB1Q86UU1 1377 aa27.98■■■□□ 2.07
ATG13-228ENST00000581438 TROQ12816 1431 aaPredicted RBP27.96■■■□□ 2.07
ATG13-228ENST00000581438 LRRIQ1Q96JM4 1722 aa27.95■■■□□ 2.07
ATG13-228ENST00000581438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.95■■■□□ 2.06
ATG13-228ENST00000581438 COL17A1Q9UMD9 1497 aaPredicted RBP27.94■■■□□ 2.06
ATG13-228ENST00000581438 NEO1Q92859 1461 aa27.92■■■□□ 2.06
ATG13-228ENST00000581438 KIF14Q15058 1648 aa27.89■■■□□ 2.05
ATG13-228ENST00000581438 TTC37Q6PGP7 1564 aa27.88■■■□□ 2.05
ATG13-228ENST00000581438 ARAP3Q8WWN8 1544 aa27.87■■■□□ 2.05
ATG13-228ENST00000581438 CFAP74Q9C0B2 1584 aa27.83■■■□□ 2.05
ATG13-228ENST00000581438 PLCH2O75038 1416 aa27.83■■■□□ 2.05
ATG13-228ENST00000581438 FANCAO15360 1455 aa27.83■■■□□ 2.04
ATG13-228ENST00000581438 AKNAQ7Z591 1439 aa27.79■■■□□ 2.04
ATG13-228ENST00000581438 VPS8Q8N3P4 1428 aa27.79■■■□□ 2.04
ATG13-228ENST00000581438 MYO5CQ9NQX4 1742 aa27.78■■■□□ 2.04
ATG13-228ENST00000581438 EFCAB2Q5VUJ9 269 aa27.77■■■□□ 2.04
ATG13-228ENST00000581438 MTUS2Q5JR59 1369 aa27.75■■■□□ 2.03
ATG13-228ENST00000581438 DENND4BO75064 1496 aaPredicted RBP27.72■■■□□ 2.03
ATG13-228ENST00000581438 RAPGEF3O95398 923 aa27.72■■■□□ 2.03
ATG13-228ENST00000581438 ARHGAP5Q13017 1502 aa27.69■■■□□ 2.02
ATG13-228ENST00000581438 ADGRL1O94910 1474 aa27.68■■■□□ 2.02
ATG13-228ENST00000581438 EHBP1L1Q8N3D4 1523 aa27.66■■■□□ 2.02
ATG13-228ENST00000581438 SCAPERQ9BY12 1400 aa27.65■■■□□ 2.02
ATG13-228ENST00000581438 PREX2Q70Z35 1606 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms