RNA–Protein interactions for RNA: ENST00000581438.5

ATG13-228, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-228ENST00000581438 NISCHQ9Y2I1 1504 aa42.44■■■■■ 4.38
ATG13-228ENST00000581438 CCDC180Q9P1Z9 1646 aa37.76■■■■□ 3.63
ATG13-228ENST00000581438 ABCC9O60706 1549 aa36.99■■■■□ 3.51
ATG13-228ENST00000581438 RB1CC1Q8TDY2 1594 aa35.59■■■■□ 3.29
ATG13-228ENST00000581438 DCAF8L2P0C7V8 631 aa35.55■■■■□ 3.28
ATG13-228ENST00000581438 NACADO15069 1562 aa35.55■■■■□ 3.28
ATG13-228ENST00000581438 ZCCHC6Q5VYS8 1495 aaKnown RBP35.33■■■■□ 3.25
ATG13-228ENST00000581438 MYO15BQ96JP2 1530 aa35.32■■■■□ 3.24
ATG13-228ENST00000581438 DCAF1Q9Y4B6 1507 aa35.13■■■■□ 3.21
ATG13-228ENST00000581438 UNC13AQ9UPW8 1703 aa34.69■■■■□ 3.14
ATG13-228ENST00000581438 PABPN1Q86U42 306 aaKnown RBP eCLIP34.56■■■■□ 3.12
ATG13-228ENST00000581438 BICRAQ9NZM4 1560 aa34.44■■■■□ 3.1
ATG13-228ENST00000581438 SCRIBQ14160 1630 aa34.42■■■■□ 3.1
ATG13-228ENST00000581438 SHROOM4Q9ULL8 1493 aa34.18■■■■□ 3.06
ATG13-228ENST00000581438 DNAJC5BQ9UF47 199 aa33.96■■■■□ 3.03
ATG13-228ENST00000581438 EIF4G1Q04637 1599 aaKnown RBP33.58■■■□□ 2.97
ATG13-228ENST00000581438 CC2D2AQ9P2K1 1620 aa33.45■■■□□ 2.95
ATG13-228ENST00000581438 CECR2Q9BXF3 1484 aa33.26■■■□□ 2.92
ATG13-228ENST00000581438 SMARCA4P51532 1647 aa32.93■■■□□ 2.86
ATG13-228ENST00000581438 BAZ1AQ9NRL2 1556 aaPredicted RBP32.92■■■□□ 2.86
ATG13-228ENST00000581438 NCAPD3P42695 1498 aa32.8■■■□□ 2.84
ATG13-228ENST00000581438 ATAD2BQ9ULI0 1458 aa32.78■■■□□ 2.84
ATG13-228ENST00000581438 SMARCA2P51531 1590 aa32.77■■■□□ 2.84
ATG13-228ENST00000581438 MROH2BQ7Z745 1585 aa32.67■■■□□ 2.82
ATG13-228ENST00000581438 PEG3Q9GZU2 1588 aa32.62■■■□□ 2.81
ATG13-228ENST00000581438 HMGXB3Q12766 1538 aa32.61■■■□□ 2.81
ATG13-228ENST00000581438 BAZ1BQ9UIG0 1483 aaKnown RBP32.53■■■□□ 2.8
ATG13-228ENST00000581438 WIZO95785 1651 aa32.31■■■□□ 2.76
ATG13-228ENST00000581438 RSF1Q96T23 1441 aaPredicted RBP32.31■■■□□ 2.76
ATG13-228ENST00000581438 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
ATG13-228ENST00000581438 NESP48681 1621 aa31.96■■■□□ 2.71
ATG13-228ENST00000581438 ERCC6Q03468 1493 aa31.94■■■□□ 2.7
ATG13-228ENST00000581438 LAMC3Q9Y6N6 1575 aa31.94■■■□□ 2.7
ATG13-228ENST00000581438 CADPSQ9ULU8 1353 aa31.85■■■□□ 2.69
ATG13-228ENST00000581438 PDS5BQ9NTI5 1447 aa31.76■■■□□ 2.68
ATG13-228ENST00000581438 CCDC88BA6NC98 1476 aa31.62■■■□□ 2.65
ATG13-228ENST00000581438 CUX2O14529 1486 aa31.62■■■□□ 2.65
ATG13-228ENST00000581438 CFTRP13569 1480 aa31.62■■■□□ 2.65
ATG13-228ENST00000581438 KIF21AQ7Z4S6 1674 aa31.57■■■□□ 2.65
ATG13-228ENST00000581438 THOC2Q8NI27 1593 aaKnown RBP31.49■■■□□ 2.63
ATG13-228ENST00000581438 SUPT5HO00267 1087 aaKnown RBP31.49■■■□□ 2.63
ATG13-228ENST00000581438 FANCD2Q9BXW9 1451 aa31.46■■■□□ 2.63
ATG13-228ENST00000581438 CEP164Q9UPV0 1460 aa31.44■■■□□ 2.62
ATG13-228ENST00000581438 MRC2Q9UBG0 1479 aa31.4■■■□□ 2.62
ATG13-228ENST00000581438 PRDM2Q13029 1718 aa31.35■■■□□ 2.61
ATG13-228ENST00000581438 WDR62O43379 1518 aa31.28■■■□□ 2.6
ATG13-228ENST00000581438 URB2Q14146 1524 aaKnown RBP31.11■■■□□ 2.57
ATG13-228ENST00000581438 ABCC8Q09428 1581 aa31.01■■■□□ 2.56
ATG13-228ENST00000581438 TOPBP1Q92547 1522 aa30.93■■■□□ 2.54
ATG13-228ENST00000581438 DNMBPQ6XZF7 1577 aa30.91■■■□□ 2.54
ATG13-228ENST00000581438 IFT140Q96RY7 1462 aa30.8■■■□□ 2.52
ATG13-228ENST00000581438 DNAJC5Q9H3Z4 198 aa30.71■■■□□ 2.51
ATG13-228ENST00000581438 POLA1P09884 1462 aaPredicted RBP30.67■■■□□ 2.5
ATG13-228ENST00000581438 CUX1P39880 1505 aa30.66■■■□□ 2.5
ATG13-228ENST00000581438 ZNF608Q9ULD9 1512 aaPredicted RBP30.59■■■□□ 2.49
ATG13-228ENST00000581438 FGD5Q6ZNL6 1462 aa30.59■■■□□ 2.49
ATG13-228ENST00000581438 SOGA1O94964 1423 aa30.58■■■□□ 2.49
ATG13-228ENST00000581438 TARBP1Q13395 1621 aaKnown RBP30.57■■■□□ 2.48
ATG13-228ENST00000581438 RAD54L2Q9Y4B4 1467 aa30.53■■■□□ 2.48
ATG13-228ENST00000581438 WRNQ14191 1432 aaPredicted RBP eCLIP30.5■■■□□ 2.47
ATG13-228ENST00000581438 EIF4G3O43432 1585 aaKnown RBP30.48■■■□□ 2.47
ATG13-228ENST00000581438 AQRO60306 1485 aaKnown RBP eCLIP30.44■■■□□ 2.46
ATG13-228ENST00000581438 WDR97A6NE52 1622 aa30.4■■■□□ 2.46
ATG13-228ENST00000581438 TOP2BQ02880 1626 aa30.4■■■□□ 2.46
ATG13-228ENST00000581438 BIVM-ERCC5R4GMW8 1640 aa30.39■■■□□ 2.46
ATG13-228ENST00000581438 TDRD9Q8NDG6 1382 aaKnown RBP30.39■■■□□ 2.45
ATG13-228ENST00000581438 SYNJ1O43426 1573 aa30.35■■■□□ 2.45
ATG13-228ENST00000581438 OSCARQ8IYS5 282 aa30.34■■■□□ 2.45
ATG13-228ENST00000581438 ABCA10Q8WWZ4 1543 aa30.31■■■□□ 2.44
ATG13-228ENST00000581438 GRIN2BQ13224 1484 aa30.23■■■□□ 2.43
ATG13-228ENST00000581438 GAPVD1Q14C86 1478 aa30.22■■■□□ 2.43
ATG13-228ENST00000581438 SNAPC4Q5SXM2 1469 aa30.17■■■□□ 2.42
ATG13-228ENST00000581438 MAGI1Q96QZ7 1491 aaPredicted RBP30.16■■■□□ 2.42
ATG13-228ENST00000581438 ABCA5Q8WWZ7 1642 aa30.15■■■□□ 2.42
ATG13-228ENST00000581438 FBLN2P98095 1184 aa30.15■■■□□ 2.42
ATG13-228ENST00000581438 PBRM1Q86U86 1689 aa30.11■■■□□ 2.41
ATG13-228ENST00000581438 CHD1O14646 1710 aa30.09■■■□□ 2.41
ATG13-228ENST00000581438 CHMP7Q8WUX9 453 aaPredicted RBP30.08■■■□□ 2.41
ATG13-228ENST00000581438 SYNJ2O15056 1496 aa30.03■■■□□ 2.4
ATG13-228ENST00000581438 ERICH3Q5RHP9 1530 aa29.96■■■□□ 2.39
ATG13-228ENST00000581438 KIF27Q86VH2 1401 aa29.89■■■□□ 2.38
ATG13-228ENST00000581438 FHAD1B1AJZ9 1412 aa29.88■■■□□ 2.37
ATG13-228ENST00000581438 ADAMTS12P58397 1594 aa29.88■■■□□ 2.37
ATG13-228ENST00000581438 GRIN2AQ12879 1464 aa29.82■■■□□ 2.36
ATG13-228ENST00000581438 TRIM41Q8WV44 630 aa29.79■■■□□ 2.36
ATG13-228ENST00000581438 CLASP1Q7Z460 1538 aa29.78■■■□□ 2.36
ATG13-228ENST00000581438 ARHGEF11O15085 1522 aa29.76■■■□□ 2.36
ATG13-228ENST00000581438 RIMBP3CA6NJZ7 1639 aa29.76■■■□□ 2.35
ATG13-228ENST00000581438 RIMBP3BA6NNM3 1639 aa29.76■■■□□ 2.35
ATG13-228ENST00000581438 RIMBP3Q9UFD9 1639 aa29.76■■■□□ 2.35
ATG13-228ENST00000581438 IGF1RP08069 1367 aa29.74■■■□□ 2.35
ATG13-228ENST00000581438 NUP160Q12769 1436 aa29.69■■■□□ 2.34
ATG13-228ENST00000581438 CUL7Q14999 1698 aa29.66■■■□□ 2.34
ATG13-228ENST00000581438 CEP170Q5SW79 1584 aa29.64■■■□□ 2.33
ATG13-228ENST00000581438 CARMIL1Q5VZK9 1371 aa29.59■■■□□ 2.33
ATG13-228ENST00000581438 CYB5RLQ6IPT4 315 aa29.55■■■□□ 2.32
ATG13-228ENST00000581438 ARAP1Q96P48 1450 aa29.51■■■□□ 2.31
ATG13-228ENST00000581438 RUSC2Q8N2Y8 1516 aa29.5■■■□□ 2.31
ATG13-228ENST00000581438 JPH4Q96JJ6 628 aa29.44■■■□□ 2.3
ATG13-228ENST00000581438 SHROOM2Q13796 1616 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms