RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 JPH4Q96JJ6 628 aa31.55■■■□□ 2.64
PPP4R1-215ENST00000580182 KIAA0586Q9BVV6 1533 aa31.51■■■□□ 2.63
PPP4R1-215ENST00000580182 PRG4Q92954 1404 aaPredicted RBP31.49■■■□□ 2.63
PPP4R1-215ENST00000580182 RAPGEF2Q9Y4G8 1499 aa31.49■■■□□ 2.63
PPP4R1-215ENST00000580182 CHIC1Q5VXU3 224 aa31.47■■■□□ 2.63
PPP4R1-215ENST00000580182 PRXQ9BXM0 1461 aa31.36■■■□□ 2.61
PPP4R1-215ENST00000580182 CSRNP3Q8WYN3 585 aa31.33■■■□□ 2.61
PPP4R1-215ENST00000580182 IQGAP2Q13576 1575 aa31.31■■■□□ 2.6
PPP4R1-215ENST00000580182 FAM9AQ8IZU1 332 aaPredicted RBP31.29■■■□□ 2.6
PPP4R1-215ENST00000580182 EEA1Q15075 1411 aa31.26■■■□□ 2.6
PPP4R1-215ENST00000580182 CTTNBP2Q8WZ74 1663 aa31.18■■■□□ 2.58
PPP4R1-215ENST00000580182 CARMIL2Q6F5E8 1435 aa31.15■■■□□ 2.58
PPP4R1-215ENST00000580182 DISP1Q96F81 1524 aa31.14■■■□□ 2.58
PPP4R1-215ENST00000580182 UGGT2Q9NYU1 1516 aa31.14■■■□□ 2.58
PPP4R1-215ENST00000580182 TTBK1Q5TCY1 1321 aaPredicted RBP31.13■■■□□ 2.57
PPP4R1-215ENST00000580182 TRHP20396 242 aaPredicted RBP31.12■■■□□ 2.57
PPP4R1-215ENST00000580182 PTPRGP23470 1445 aa31.09■■■□□ 2.57
PPP4R1-215ENST00000580182 TNIKQ9UKE5 1360 aa31.09■■■□□ 2.57
PPP4R1-215ENST00000580182 KIAA0556O60303 1618 aa31.04■■■□□ 2.56
PPP4R1-215ENST00000580182 ADCY10Q96PN6 1610 aa31.03■■■□□ 2.56
PPP4R1-215ENST00000580182 KIF21BO75037 1637 aa30.98■■■□□ 2.55
PPP4R1-215ENST00000580182 EHMT2Q96KQ7 1210 aa30.95■■■□□ 2.55
PPP4R1-215ENST00000580182 GOLGA3Q08378 1498 aa30.93■■■□□ 2.54
PPP4R1-215ENST00000580182 NPM1P06748 294 aaKnown RBP eCLIP30.91■■■□□ 2.54
PPP4R1-215ENST00000580182 UACAQ9BZF9 1416 aa30.88■■■□□ 2.53
PPP4R1-215ENST00000580182 RANGAP1P46060 587 aaPredicted RBP30.86■■■□□ 2.53
PPP4R1-215ENST00000580182 P3H3Q8IVL6 736 aa30.86■■■□□ 2.53
PPP4R1-215ENST00000580182 UHRF1BP1LA0JNW5 1464 aa30.82■■■□□ 2.53
PPP4R1-215ENST00000580182 ABCC2Q92887 1545 aa30.81■■■□□ 2.52
PPP4R1-215ENST00000580182 MAPKBP1O60336 1514 aa30.8■■■□□ 2.52
PPP4R1-215ENST00000580182 SAMD9Q5K651 1589 aa30.79■■■□□ 2.52
PPP4R1-215ENST00000580182 PLB1Q6P1J6 1458 aa30.78■■■□□ 2.52
PPP4R1-215ENST00000580182 UBTFP17480 764 aaKnown RBP30.78■■■□□ 2.52
PPP4R1-215ENST00000580182 KIF13AQ9H1H9 1805 aa30.73■■■□□ 2.51
PPP4R1-215ENST00000580182 ABCA8O94911 1581 aa30.71■■■□□ 2.51
PPP4R1-215ENST00000580182 ABCC10Q5T3U5 1492 aa30.7■■■□□ 2.51
PPP4R1-215ENST00000580182 KDM5BQ9UGL1 1544 aa30.69■■■□□ 2.5
PPP4R1-215ENST00000580182 FAM69CQ0P6D2 419 aa30.68■■■□□ 2.5
PPP4R1-215ENST00000580182 DIP2BQ9P265 1576 aa30.66■■■□□ 2.5
PPP4R1-215ENST00000580182 ZCCHC11Q5TAX3 1644 aaKnown RBP30.65■■■□□ 2.5
PPP4R1-215ENST00000580182 FHOD3Q2V2M9 1422 aa30.65■■■□□ 2.5
PPP4R1-215ENST00000580182 ASXL2Q76L83 1435 aa30.65■■■□□ 2.5
PPP4R1-215ENST00000580182 EFCAB5A4FU69 1503 aa30.59■■■□□ 2.49
PPP4R1-215ENST00000580182 ARID3CA6NKF2 412 aa30.56■■■□□ 2.48
PPP4R1-215ENST00000580182 RAPGEF6Q8TEU7 1601 aa30.52■■■□□ 2.48
PPP4R1-215ENST00000580182 ARHGAP35Q9NRY4 1499 aa30.5■■■□□ 2.47
PPP4R1-215ENST00000580182 ATP10BO94823 1461 aa30.48■■■□□ 2.47
PPP4R1-215ENST00000580182 EPRSP07814 1512 aaKnown RBP30.47■■■□□ 2.47
PPP4R1-215ENST00000580182 WDR7Q9Y4E6 1490 aa30.45■■■□□ 2.47
PPP4R1-215ENST00000580182 GLI2P10070 1586 aa30.44■■■□□ 2.46
PPP4R1-215ENST00000580182 TSPOAP1O95153 1857 aa30.44■■■□□ 2.46
PPP4R1-215ENST00000580182 NUP153P49790 1475 aaKnown RBP30.44■■■□□ 2.46
PPP4R1-215ENST00000580182 KCNH8Q96L42 1107 aa30.38■■■□□ 2.45
PPP4R1-215ENST00000580182 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.36■■■□□ 2.45
PPP4R1-215ENST00000580182 HNRNPUL2Q1KMD3 747 aaKnown RBP30.36■■■□□ 2.45
PPP4R1-215ENST00000580182 FMN1Q68DA7 1419 aa30.32■■■□□ 2.44
PPP4R1-215ENST00000580182 PPRC1Q5VV67 1664 aaKnown RBP30.32■■■□□ 2.44
PPP4R1-215ENST00000580182 MAP3K4Q9Y6R4 1608 aa30.32■■■□□ 2.44
PPP4R1-215ENST00000580182 ATP1B4Q9UN42 357 aaPredicted RBP30.27■■■□□ 2.44
PPP4R1-215ENST00000580182 CLIP1P30622 1438 aa30.27■■■□□ 2.44
PPP4R1-215ENST00000580182 LOC105371045A0A1W2PR82 267 aa30.24■■■□□ 2.43
PPP4R1-215ENST00000580182 CDK13Q14004 1512 aaKnown RBP30.23■■■□□ 2.43
PPP4R1-215ENST00000580182 HECW1Q76N89 1606 aa30.21■■■□□ 2.43
PPP4R1-215ENST00000580182 CD109Q6YHK3 1445 aa30.21■■■□□ 2.43
PPP4R1-215ENST00000580182 CFAP43Q8NDM7 1665 aa30.19■■■□□ 2.42
PPP4R1-215ENST00000580182 KDM6BO15054 1643 aa30.18■■■□□ 2.42
PPP4R1-215ENST00000580182 PLEKHD1A6NEE1 506 aa30.18■■■□□ 2.42
PPP4R1-215ENST00000580182 TEX14Q8IWB6 1497 aa30.14■■■□□ 2.42
PPP4R1-215ENST00000580182 PCF11O94913 1555 aaKnown RBP30.13■■■□□ 2.41
PPP4R1-215ENST00000580182 MAGI3Q5TCQ9 1506 aa30.12■■■□□ 2.41
PPP4R1-215ENST00000580182 ABCA9Q8IUA7 1624 aa30.12■■■□□ 2.41
PPP4R1-215ENST00000580182 CEP162Q5TB80 1403 aa30.12■■■□□ 2.41
PPP4R1-215ENST00000580182 LRRIQ1Q96JM4 1722 aa30.11■■■□□ 2.41
PPP4R1-215ENST00000580182 CASKIN1Q8WXD9 1431 aa30.1■■■□□ 2.41
PPP4R1-215ENST00000580182 COL17A1Q9UMD9 1497 aaPredicted RBP30.09■■■□□ 2.41
PPP4R1-215ENST00000580182 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.01■■■□□ 2.4
PPP4R1-215ENST00000580182 FYCO1Q9BQS8 1478 aa30■■■□□ 2.39
PPP4R1-215ENST00000580182 CDK11AQ9UQ88 783 aaPredicted RBP29.99■■■□□ 2.39
PPP4R1-215ENST00000580182 TTC37Q6PGP7 1564 aa29.98■■■□□ 2.39
PPP4R1-215ENST00000580182 CCDC18Q5T9S5 1454 aa29.96■■■□□ 2.39
PPP4R1-215ENST00000580182 TROQ12816 1431 aaPredicted RBP29.94■■■□□ 2.38
PPP4R1-215ENST00000580182 KIF14Q15058 1648 aa29.92■■■□□ 2.38
PPP4R1-215ENST00000580182 NEO1Q92859 1461 aa29.87■■■□□ 2.37
PPP4R1-215ENST00000580182 ARAP3Q8WWN8 1544 aa29.86■■■□□ 2.37
PPP4R1-215ENST00000580182 PHLDB1Q86UU1 1377 aa29.84■■■□□ 2.37
PPP4R1-215ENST00000580182 FANCAO15360 1455 aa29.82■■■□□ 2.36
PPP4R1-215ENST00000580182 PLCH2O75038 1416 aa29.81■■■□□ 2.36
PPP4R1-215ENST00000580182 RAPGEF3O95398 923 aa29.79■■■□□ 2.36
PPP4R1-215ENST00000580182 AKNAQ7Z591 1439 aa29.79■■■□□ 2.36
PPP4R1-215ENST00000580182 MYO5CQ9NQX4 1742 aa29.77■■■□□ 2.36
PPP4R1-215ENST00000580182 CFAP74Q9C0B2 1584 aa29.75■■■□□ 2.35
PPP4R1-215ENST00000580182 VPS8Q8N3P4 1428 aa29.74■■■□□ 2.35
PPP4R1-215ENST00000580182 FRMPD1Q5SYB0 1578 aa29.71■■■□□ 2.35
PPP4R1-215ENST00000580182 EFCAB2Q5VUJ9 269 aa29.69■■■□□ 2.34
PPP4R1-215ENST00000580182 DENND4BO75064 1496 aaPredicted RBP29.68■■■□□ 2.34
PPP4R1-215ENST00000580182 MTUS2Q5JR59 1369 aa29.68■■■□□ 2.34
PPP4R1-215ENST00000580182 ARHGAP5Q13017 1502 aa29.68■■■□□ 2.34
PPP4R1-215ENST00000580182 CDC42BPBQ9Y5S2 1711 aa29.67■■■□□ 2.34
PPP4R1-215ENST00000580182 ADGRL1O94910 1474 aa29.67■■■□□ 2.34
PPP4R1-215ENST00000580182 RICTORQ6R327 1708 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms