RNA–Protein interactions for RNA: ENST00000580004.1

NEK4P2-201, Transcript of NIMA-related kinase 4 pseudogene 2, humanhuman

BASIC

Gene NEK4P2, Length 1,012 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P2-201ENST00000580004 EEA1Q15075 1411 aa31.43■■■□□ 2.62
NEK4P2-201ENST00000580004 CHIC1Q5VXU3 224 aa31.39■■■□□ 2.62
NEK4P2-201ENST00000580004 CYB5RLQ6IPT4 315 aa31.37■■■□□ 2.61
NEK4P2-201ENST00000580004 JPH4Q96JJ6 628 aa31.37■■■□□ 2.61
NEK4P2-201ENST00000580004 PRXQ9BXM0 1461 aa31.35■■■□□ 2.61
NEK4P2-201ENST00000580004 PRG4Q92954 1404 aaPredicted RBP31.32■■■□□ 2.61
NEK4P2-201ENST00000580004 ERCC6L2Q5T890 1561 aa31.32■■■□□ 2.6
NEK4P2-201ENST00000580004 IQGAP2Q13576 1575 aa31.3■■■□□ 2.6
NEK4P2-201ENST00000580004 CSRNP3Q8WYN3 585 aa31.27■■■□□ 2.6
NEK4P2-201ENST00000580004 CTTNBP2Q8WZ74 1663 aa31.22■■■□□ 2.59
NEK4P2-201ENST00000580004 CARMIL2Q6F5E8 1435 aa31.15■■■□□ 2.58
NEK4P2-201ENST00000580004 UGGT2Q9NYU1 1516 aa31.14■■■□□ 2.57
NEK4P2-201ENST00000580004 KIF21BO75037 1637 aa31.08■■■□□ 2.57
NEK4P2-201ENST00000580004 DISP1Q96F81 1524 aa31.03■■■□□ 2.56
NEK4P2-201ENST00000580004 TNIKQ9UKE5 1360 aa31.01■■■□□ 2.55
NEK4P2-201ENST00000580004 KIAA0556O60303 1618 aa30.98■■■□□ 2.55
NEK4P2-201ENST00000580004 GOLGA3Q08378 1498 aa30.98■■■□□ 2.55
NEK4P2-201ENST00000580004 FAM9AQ8IZU1 332 aaPredicted RBP30.98■■■□□ 2.55
NEK4P2-201ENST00000580004 PTPRGP23470 1445 aa30.96■■■□□ 2.55
NEK4P2-201ENST00000580004 ADCY10Q96PN6 1610 aa30.88■■■□□ 2.53
NEK4P2-201ENST00000580004 UHRF1BP1LA0JNW5 1464 aa30.82■■■□□ 2.52
NEK4P2-201ENST00000580004 SAMD9Q5K651 1589 aa30.8■■■□□ 2.52
NEK4P2-201ENST00000580004 NPM1P06748 294 aaKnown RBP eCLIP30.78■■■□□ 2.52
NEK4P2-201ENST00000580004 UACAQ9BZF9 1416 aa30.77■■■□□ 2.52
NEK4P2-201ENST00000580004 MAPKBP1O60336 1514 aa30.77■■■□□ 2.52
NEK4P2-201ENST00000580004 ABCC2Q92887 1545 aa30.75■■■□□ 2.51
NEK4P2-201ENST00000580004 TRHP20396 242 aaPredicted RBP30.73■■■□□ 2.51
NEK4P2-201ENST00000580004 EFCAB5A4FU69 1503 aa30.7■■■□□ 2.51
NEK4P2-201ENST00000580004 TTBK1Q5TCY1 1321 aaPredicted RBP30.69■■■□□ 2.5
NEK4P2-201ENST00000580004 UBTFP17480 764 aaKnown RBP30.66■■■□□ 2.5
NEK4P2-201ENST00000580004 KDM5BQ9UGL1 1544 aa30.64■■■□□ 2.5
NEK4P2-201ENST00000580004 ABCA8O94911 1581 aa30.64■■■□□ 2.5
NEK4P2-201ENST00000580004 PLB1Q6P1J6 1458 aa30.6■■■□□ 2.49
NEK4P2-201ENST00000580004 KIF13AQ9H1H9 1805 aa30.59■■■□□ 2.49
NEK4P2-201ENST00000580004 ABCC10Q5T3U5 1492 aa30.57■■■□□ 2.48
NEK4P2-201ENST00000580004 ZCCHC11Q5TAX3 1644 aaKnown RBP30.55■■■□□ 2.48
NEK4P2-201ENST00000580004 P3H3Q8IVL6 736 aa30.53■■■□□ 2.48
NEK4P2-201ENST00000580004 DIP2BQ9P265 1576 aa30.53■■■□□ 2.48
NEK4P2-201ENST00000580004 FHOD3Q2V2M9 1422 aa30.49■■■□□ 2.47
NEK4P2-201ENST00000580004 RAPGEF6Q8TEU7 1601 aa30.49■■■□□ 2.47
NEK4P2-201ENST00000580004 ASXL2Q76L83 1435 aa30.48■■■□□ 2.47
NEK4P2-201ENST00000580004 EHMT2Q96KQ7 1210 aa30.48■■■□□ 2.47
NEK4P2-201ENST00000580004 RANGAP1P46060 587 aaPredicted RBP30.46■■■□□ 2.47
NEK4P2-201ENST00000580004 ARHGAP35Q9NRY4 1499 aa30.44■■■□□ 2.46
NEK4P2-201ENST00000580004 GLI2P10070 1586 aa30.41■■■□□ 2.46
NEK4P2-201ENST00000580004 FAM69CQ0P6D2 419 aa30.41■■■□□ 2.46
NEK4P2-201ENST00000580004 FMN1Q68DA7 1419 aa30.39■■■□□ 2.45
NEK4P2-201ENST00000580004 WDR7Q9Y4E6 1490 aa30.38■■■□□ 2.45
NEK4P2-201ENST00000580004 ATP10BO94823 1461 aa30.34■■■□□ 2.45
NEK4P2-201ENST00000580004 EPRSP07814 1512 aaKnown RBP30.33■■■□□ 2.45
NEK4P2-201ENST00000580004 NUP153P49790 1475 aaKnown RBP30.33■■■□□ 2.45
NEK4P2-201ENST00000580004 CLIP1P30622 1438 aa30.25■■■□□ 2.43
NEK4P2-201ENST00000580004 HECW1Q76N89 1606 aa30.25■■■□□ 2.43
NEK4P2-201ENST00000580004 MAP3K4Q9Y6R4 1608 aa30.25■■■□□ 2.43
NEK4P2-201ENST00000580004 TSPOAP1O95153 1857 aa30.21■■■□□ 2.43
NEK4P2-201ENST00000580004 CFAP43Q8NDM7 1665 aa30.2■■■□□ 2.42
NEK4P2-201ENST00000580004 PPRC1Q5VV67 1664 aaKnown RBP30.16■■■□□ 2.42
NEK4P2-201ENST00000580004 ARID3CA6NKF2 412 aa30.14■■■□□ 2.42
NEK4P2-201ENST00000580004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.13■■■□□ 2.41
NEK4P2-201ENST00000580004 HNRNPUL2Q1KMD3 747 aaKnown RBP30.13■■■□□ 2.41
NEK4P2-201ENST00000580004 TEX14Q8IWB6 1497 aa30.12■■■□□ 2.41
NEK4P2-201ENST00000580004 CASKIN1Q8WXD9 1431 aa30.12■■■□□ 2.41
NEK4P2-201ENST00000580004 CEP162Q5TB80 1403 aa30.11■■■□□ 2.41
NEK4P2-201ENST00000580004 ABCA9Q8IUA7 1624 aa30.11■■■□□ 2.41
NEK4P2-201ENST00000580004 PLEKHD1A6NEE1 506 aa30.09■■■□□ 2.41
NEK4P2-201ENST00000580004 KCNH8Q96L42 1107 aa30.09■■■□□ 2.41
NEK4P2-201ENST00000580004 PCF11O94913 1555 aaKnown RBP30.07■■■□□ 2.4
NEK4P2-201ENST00000580004 MAGI3Q5TCQ9 1506 aa30.07■■■□□ 2.4
NEK4P2-201ENST00000580004 FYCO1Q9BQS8 1478 aa30.07■■■□□ 2.4
NEK4P2-201ENST00000580004 CDK13Q14004 1512 aaKnown RBP30.06■■■□□ 2.4
NEK4P2-201ENST00000580004 CD109Q6YHK3 1445 aa30.06■■■□□ 2.4
NEK4P2-201ENST00000580004 CCDC18Q5T9S5 1454 aa30.05■■■□□ 2.4
NEK4P2-201ENST00000580004 KDM6BO15054 1643 aa30.04■■■□□ 2.4
NEK4P2-201ENST00000580004 LRRIQ1Q96JM4 1722 aa30.03■■■□□ 2.4
NEK4P2-201ENST00000580004 CDK11AQ9UQ88 783 aaPredicted RBP30.02■■■□□ 2.4
NEK4P2-201ENST00000580004 LOC105371045A0A1W2PR82 267 aa30■■■□□ 2.39
NEK4P2-201ENST00000580004 ATP1B4Q9UN42 357 aaPredicted RBP30■■■□□ 2.39
NEK4P2-201ENST00000580004 PHLDB1Q86UU1 1377 aa29.91■■■□□ 2.38
NEK4P2-201ENST00000580004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.91■■■□□ 2.38
NEK4P2-201ENST00000580004 TROQ12816 1431 aaPredicted RBP29.9■■■□□ 2.38
NEK4P2-201ENST00000580004 KIF14Q15058 1648 aa29.88■■■□□ 2.37
NEK4P2-201ENST00000580004 NEO1Q92859 1461 aa29.86■■■□□ 2.37
NEK4P2-201ENST00000580004 TTC37Q6PGP7 1564 aa29.86■■■□□ 2.37
NEK4P2-201ENST00000580004 CFAP74Q9C0B2 1584 aa29.83■■■□□ 2.37
NEK4P2-201ENST00000580004 ARAP3Q8WWN8 1544 aa29.82■■■□□ 2.36
NEK4P2-201ENST00000580004 COL17A1Q9UMD9 1497 aaPredicted RBP29.8■■■□□ 2.36
NEK4P2-201ENST00000580004 MYO5CQ9NQX4 1742 aa29.79■■■□□ 2.36
NEK4P2-201ENST00000580004 VPS8Q8N3P4 1428 aa29.79■■■□□ 2.36
NEK4P2-201ENST00000580004 PLCH2O75038 1416 aa29.75■■■□□ 2.35
NEK4P2-201ENST00000580004 FANCAO15360 1455 aa29.74■■■□□ 2.35
NEK4P2-201ENST00000580004 AKNAQ7Z591 1439 aa29.67■■■□□ 2.34
NEK4P2-201ENST00000580004 EHBP1L1Q8N3D4 1523 aa29.66■■■□□ 2.34
NEK4P2-201ENST00000580004 MTUS2Q5JR59 1369 aa29.64■■■□□ 2.34
NEK4P2-201ENST00000580004 PREX2Q70Z35 1606 aa29.64■■■□□ 2.34
NEK4P2-201ENST00000580004 MAP3K1Q13233 1512 aa29.63■■■□□ 2.33
NEK4P2-201ENST00000580004 TIAM1Q13009 1591 aa29.62■■■□□ 2.33
NEK4P2-201ENST00000580004 EFCAB2Q5VUJ9 269 aa29.62■■■□□ 2.33
NEK4P2-201ENST00000580004 CDC42BPBQ9Y5S2 1711 aa29.62■■■□□ 2.33
NEK4P2-201ENST00000580004 CDC42BPAQ5VT25 1732 aa29.6■■■□□ 2.33
NEK4P2-201ENST00000580004 ARHGAP5Q13017 1502 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms