RNA–Protein interactions for RNA: ENST00000579344.1

CCR7-203, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 1 (best) BASIC

Gene CCR7, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-203ENST00000579344 SETD5Q9C0A6 1442 aa22.39■■□□□ 1.17
CCR7-203ENST00000579344 CDK11AQ9UQ88 783 aaPredicted RBP22.37■■□□□ 1.17
CCR7-203ENST00000579344 ANP32CO43423 234 aa22.36■■□□□ 1.17
CCR7-203ENST00000579344 DDX10Q13206 875 aaKnown RBP22.35■■□□□ 1.17
CCR7-203ENST00000579344 ERICH6Q7L0X2 663 aa22.34■■□□□ 1.17
CCR7-203ENST00000579344 PRKCSHP14314 528 aaPredicted RBP22.31■■□□□ 1.16
CCR7-203ENST00000579344 ARHGAP35Q9NRY4 1499 aa22.27■■□□□ 1.15
CCR7-203ENST00000579344 ITGAEP38570 1179 aa22.26■■□□□ 1.15
CCR7-203ENST00000579344 TIAM1Q13009 1591 aa22.26■■□□□ 1.15
CCR7-203ENST00000579344 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.21■■□□□ 1.15
CCR7-203ENST00000579344 TRIM52Q96A61 297 aa22.2■■□□□ 1.14
CCR7-203ENST00000579344 ATAD2BQ9ULI0 1458 aa22.19■■□□□ 1.14
CCR7-203ENST00000579344 PPP4R2Q9NY27 417 aa22.19■■□□□ 1.14
CCR7-203ENST00000579344 DEKP35659 375 aaKnown RBP22.18■■□□□ 1.14
CCR7-203ENST00000579344 KIF27Q86VH2 1401 aa22.16■■□□□ 1.14
CCR7-203ENST00000579344 LRRC9Q6ZRR7 1453 aa22.14■■□□□ 1.14
CCR7-203ENST00000579344 FHAD1B1AJZ9 1412 aa22.09■■□□□ 1.13
CCR7-203ENST00000579344 CFAP43Q8NDM7 1665 aa22.09■■□□□ 1.13
CCR7-203ENST00000579344 RANGAP1P46060 587 aaPredicted RBP22.07■■□□□ 1.12
CCR7-203ENST00000579344 SIN3AQ96ST3 1273 aa22.07■■□□□ 1.12
CCR7-203ENST00000579344 NOP58Q9Y2X3 529 aaKnown RBP22.03■■□□□ 1.12
CCR7-203ENST00000579344 PHLDB1Q86UU1 1377 aa22.03■■□□□ 1.12
CCR7-203ENST00000579344 HNRNPUQ00839 825 aaKnown RBP eCLIP22■■□□□ 1.11
CCR7-203ENST00000579344 CUX1P39880 1505 aa22■■□□□ 1.11
CCR7-203ENST00000579344 NCOA2Q15596 1464 aa21.98■■□□□ 1.11
CCR7-203ENST00000579344 TONSLQ96HA7 1378 aa21.97■■□□□ 1.11
CCR7-203ENST00000579344 KDM5BQ9UGL1 1544 aa21.93■■□□□ 1.1
CCR7-203ENST00000579344 UACAQ9BZF9 1416 aa21.93■■□□□ 1.1
CCR7-203ENST00000579344 ZBED9Q6R2W3 1325 aa21.91■■□□□ 1.1
CCR7-203ENST00000579344 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
CCR7-203ENST00000579344 AQRO60306 1485 aaKnown RBP eCLIP21.88■■□□□ 1.09
CCR7-203ENST00000579344 HFM1A2PYH4 1435 aa21.88■■□□□ 1.09
CCR7-203ENST00000579344 CNTLNQ9NXG0 1405 aa21.85■■□□□ 1.09
CCR7-203ENST00000579344 FYCO1Q9BQS8 1478 aa21.84■■□□□ 1.09
CCR7-203ENST00000579344 CCDC18Q5T9S5 1454 aa21.84■■□□□ 1.09
CCR7-203ENST00000579344 IPO9Q96P70 1041 aaKnown RBP21.83■■□□□ 1.08
CCR7-203ENST00000579344 IRX6P78412 446 aaPredicted RBP21.82■■□□□ 1.08
CCR7-203ENST00000579344 PCF11O94913 1555 aaKnown RBP21.82■■□□□ 1.08
CCR7-203ENST00000579344 HIRIP3Q9BW71 556 aaPredicted RBP21.81■■□□□ 1.08
CCR7-203ENST00000579344 FAM50AQ14320 339 aaKnown RBP21.81■■□□□ 1.08
CCR7-203ENST00000579344 HMGXB3Q12766 1538 aa21.8■■□□□ 1.08
CCR7-203ENST00000579344 RNF123Q5XPI4 1314 aa21.8■■□□□ 1.08
CCR7-203ENST00000579344 IGF1RP08069 1367 aa21.8■■□□□ 1.08
CCR7-203ENST00000579344 PTPN23Q9H3S7 1636 aa21.8■■□□□ 1.08
CCR7-203ENST00000579344 ANP32AP39687 249 aaKnown RBP21.78■■□□□ 1.08
CCR7-203ENST00000579344 WASHC2AQ641Q2 1341 aa21.78■■□□□ 1.08
CCR7-203ENST00000579344 SMG6Q86US8 1419 aaKnown RBP21.78■■□□□ 1.08
CCR7-203ENST00000579344 EFCAB5A4FU69 1503 aa21.77■■□□□ 1.08
CCR7-203ENST00000579344 RTL5Q5HYW3 569 aaPredicted RBP21.77■■□□□ 1.08
CCR7-203ENST00000579344 PAK3O75914 559 aaPredicted RBP21.77■■□□□ 1.08
CCR7-203ENST00000579344 FGD6Q6ZV73 1430 aa21.76■■□□□ 1.07
CCR7-203ENST00000579344 CASKIN1Q8WXD9 1431 aa21.76■■□□□ 1.07
CCR7-203ENST00000579344 USP35Q9P2H5 1018 aa21.75■■□□□ 1.07
CCR7-203ENST00000579344 CFTRP13569 1480 aa21.74■■□□□ 1.07
CCR7-203ENST00000579344 ABCA5Q8WWZ7 1642 aa21.74■■□□□ 1.07
CCR7-203ENST00000579344 B4GALNT3Q6L9W6 998 aa21.74■■□□□ 1.07
CCR7-203ENST00000579344 FGD5Q6ZNL6 1462 aa21.74■■□□□ 1.07
CCR7-203ENST00000579344 NCOA1Q15788 1441 aa21.73■■□□□ 1.07
CCR7-203ENST00000579344 ANO8Q9HCE9 1232 aaPredicted RBP21.72■■□□□ 1.07
CCR7-203ENST00000579344 C11orf95C9JLR9 678 aaPredicted RBP21.71■■□□□ 1.07
CCR7-203ENST00000579344 PRKRIP1Q9H875 184 aaPredicted RBP21.69■■□□□ 1.06
CCR7-203ENST00000579344 CARMIL1Q5VZK9 1371 aa21.69■■□□□ 1.06
CCR7-203ENST00000579344 NBR1Q14596 966 aa21.69■■□□□ 1.06
CCR7-203ENST00000579344 ZBTB47Q9UFB7 747 aaPredicted RBP21.69■■□□□ 1.06
CCR7-203ENST00000579344 NAIPQ13075 1403 aa21.68■■□□□ 1.06
CCR7-203ENST00000579344 PRDM2Q13029 1718 aa21.68■■□□□ 1.06
CCR7-203ENST00000579344 FMN1Q68DA7 1419 aa21.67■■□□□ 1.06
CCR7-203ENST00000579344 HSPA5P11021 654 aaKnown RBP21.66■■□□□ 1.06
CCR7-203ENST00000579344 HECW1Q76N89 1606 aa21.66■■□□□ 1.06
CCR7-203ENST00000579344 EIF4G2P78344 907 aaKnown RBP eCLIP21.66■■□□□ 1.06
CCR7-203ENST00000579344 POLR1AO95602 1720 aaPredicted RBP21.65■■□□□ 1.06
CCR7-203ENST00000579344 AKNAQ7Z591 1439 aa21.65■■□□□ 1.06
CCR7-203ENST00000579344 CCDC7Q96M83 1385 aa21.64■■□□□ 1.05
CCR7-203ENST00000579344 WASHC2CQ9Y4E1 1318 aa21.63■■□□□ 1.05
CCR7-203ENST00000579344 PTPRKQ15262 1439 aa21.61■■□□□ 1.05
CCR7-203ENST00000579344 CC2D2AQ9P2K1 1620 aa21.6■■□□□ 1.05
CCR7-203ENST00000579344 SALL2Q9Y467 1007 aaPredicted RBP21.6■■□□□ 1.05
CCR7-203ENST00000579344 MRS2Q9HD23 443 aa21.58■■□□□ 1.05
CCR7-203ENST00000579344 NUDCQ9Y266 331 aa21.58■■□□□ 1.05
CCR7-203ENST00000579344 GCC2Q8IWJ2 1684 aa21.58■■□□□ 1.05
CCR7-203ENST00000579344 CCDC184Q52MB2 194 aa21.58■■□□□ 1.04
CCR7-203ENST00000579344 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
CCR7-203ENST00000579344 UBE2Q2Q8WVN8 375 aa21.56■■□□□ 1.04
CCR7-203ENST00000579344 MYOM3Q5VTT5 1437 aa21.54■■□□□ 1.04
CCR7-203ENST00000579344 CCDC136Q96JN2 1154 aa21.54■■□□□ 1.04
CCR7-203ENST00000579344 SNAPC4Q5SXM2 1469 aa21.53■■□□□ 1.04
CCR7-203ENST00000579344 PPM1GO15355 546 aaPredicted RBP21.52■■□□□ 1.03
CCR7-203ENST00000579344 SPATA31E1Q6ZUB1 1445 aa21.51■■□□□ 1.03
CCR7-203ENST00000579344 DENND4BO75064 1496 aaPredicted RBP21.51■■□□□ 1.03
CCR7-203ENST00000579344 TCERG1O14776 1098 aaKnown RBP21.5■■□□□ 1.03
CCR7-203ENST00000579344 TCOF1Q13428 1488 aaKnown RBP21.5■■□□□ 1.03
CCR7-203ENST00000579344 FAM9BQ8IZU0 186 aa21.49■■□□□ 1.03
CCR7-203ENST00000579344 IL27Q8NEV9 243 aa21.49■■□□□ 1.03
CCR7-203ENST00000579344 ARHGEF11O15085 1522 aa21.48■■□□□ 1.03
CCR7-203ENST00000579344 MS4A1P11836 297 aa21.48■■□□□ 1.03
CCR7-203ENST00000579344 FHOD3Q2V2M9 1422 aa21.48■■□□□ 1.03
CCR7-203ENST00000579344 EHBP1L1Q8N3D4 1523 aa21.46■■□□□ 1.03
CCR7-203ENST00000579344 MIA2Q96PC5 1412 aa21.45■■□□□ 1.02
CCR7-203ENST00000579344 SUPT6HQ7KZ85 1726 aaKnown RBP21.45■■□□□ 1.02
CCR7-203ENST00000579344 CTTNBP2Q8WZ74 1663 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms