RNA–Protein interactions for RNA: ENST00000579205.5

MSI2-207, Transcript of musashi RNA binding protein 2, humanhuman

TSL 4

Gene MSI2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-207ENST00000579205 CEP162Q5TB80 1403 aa23.67■■□□□ 1.38
MSI2-207ENST00000579205 CLIP1P30622 1438 aa23.6■■□□□ 1.37
MSI2-207ENST00000579205 RANGAP1P46060 587 aaPredicted RBP23.6■■□□□ 1.37
MSI2-207ENST00000579205 IQGAP2Q13576 1575 aa23.6■■□□□ 1.37
MSI2-207ENST00000579205 KIAA0586Q9BVV6 1533 aa23.59■■□□□ 1.37
MSI2-207ENST00000579205 NUP160Q12769 1436 aa23.58■■□□□ 1.36
MSI2-207ENST00000579205 CEP170Q5SW79 1584 aa23.57■■□□□ 1.36
MSI2-207ENST00000579205 EFCAB5A4FU69 1503 aa23.52■■□□□ 1.36
MSI2-207ENST00000579205 UGGT2Q9NYU1 1516 aa23.44■■□□□ 1.34
MSI2-207ENST00000579205 ARHGAP35Q9NRY4 1499 aa23.42■■□□□ 1.34
MSI2-207ENST00000579205 OSCARQ8IYS5 282 aa23.4■■□□□ 1.34
MSI2-207ENST00000579205 CARMIL2Q6F5E8 1435 aa23.4■■□□□ 1.34
MSI2-207ENST00000579205 SAMD9Q5K651 1589 aa23.4■■□□□ 1.34
MSI2-207ENST00000579205 JPH4Q96JJ6 628 aa23.38■■□□□ 1.33
MSI2-207ENST00000579205 CLASP1Q7Z460 1538 aa23.37■■□□□ 1.33
MSI2-207ENST00000579205 P3H3Q8IVL6 736 aa23.34■■□□□ 1.33
MSI2-207ENST00000579205 ARAP1Q96P48 1450 aa23.34■■□□□ 1.33
MSI2-207ENST00000579205 KIAA0556O60303 1618 aa23.33■■□□□ 1.32
MSI2-207ENST00000579205 VPS8Q8N3P4 1428 aa23.33■■□□□ 1.32
MSI2-207ENST00000579205 FHOD3Q2V2M9 1422 aa23.32■■□□□ 1.32
MSI2-207ENST00000579205 SHROOM2Q13796 1616 aa23.31■■□□□ 1.32
MSI2-207ENST00000579205 FMN1Q68DA7 1419 aa23.31■■□□□ 1.32
MSI2-207ENST00000579205 PRG4Q92954 1404 aaPredicted RBP23.29■■□□□ 1.32
MSI2-207ENST00000579205 DISP1Q96F81 1524 aa23.28■■□□□ 1.32
MSI2-207ENST00000579205 APLP2Q06481 763 aa23.25■■□□□ 1.31
MSI2-207ENST00000579205 TTBK1Q5TCY1 1321 aaPredicted RBP23.18■■□□□ 1.3
MSI2-207ENST00000579205 FYCO1Q9BQS8 1478 aa23.17■■□□□ 1.3
MSI2-207ENST00000579205 ATP1B4Q9UN42 357 aaPredicted RBP23.16■■□□□ 1.3
MSI2-207ENST00000579205 CASKIN1Q8WXD9 1431 aa23.15■■□□□ 1.3
MSI2-207ENST00000579205 PCF11O94913 1555 aaKnown RBP23.14■■□□□ 1.3
MSI2-207ENST00000579205 PTPRGP23470 1445 aa23.13■■□□□ 1.29
MSI2-207ENST00000579205 HECW1Q76N89 1606 aa23.11■■□□□ 1.29
MSI2-207ENST00000579205 RAPGEF6Q8TEU7 1601 aa23.08■■□□□ 1.28
MSI2-207ENST00000579205 ERCC6L2Q5T890 1561 aa23.07■■□□□ 1.28
MSI2-207ENST00000579205 CCDC18Q5T9S5 1454 aa23.05■■□□□ 1.28
MSI2-207ENST00000579205 MAP3K1Q13233 1512 aa23.01■■□□□ 1.27
MSI2-207ENST00000579205 PLB1Q6P1J6 1458 aa22.99■■□□□ 1.27
MSI2-207ENST00000579205 ABCA8O94911 1581 aa22.99■■□□□ 1.27
MSI2-207ENST00000579205 TIAM1Q13009 1591 aa22.99■■□□□ 1.27
MSI2-207ENST00000579205 CFAP43Q8NDM7 1665 aa22.99■■□□□ 1.27
MSI2-207ENST00000579205 UACAQ9BZF9 1416 aa22.99■■□□□ 1.27
MSI2-207ENST00000579205 ARHGEF11O15085 1522 aa22.98■■□□□ 1.27
MSI2-207ENST00000579205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.95■■□□□ 1.26
MSI2-207ENST00000579205 EPRSP07814 1512 aaKnown RBP22.95■■□□□ 1.26
MSI2-207ENST00000579205 HNRNPUL2Q1KMD3 747 aaKnown RBP22.95■■□□□ 1.26
MSI2-207ENST00000579205 NUP153P49790 1475 aaKnown RBP22.94■■□□□ 1.26
MSI2-207ENST00000579205 ABCC2Q92887 1545 aa22.93■■□□□ 1.26
MSI2-207ENST00000579205 CDK11AQ9UQ88 783 aaPredicted RBP22.93■■□□□ 1.26
MSI2-207ENST00000579205 UHRF1BP1LA0JNW5 1464 aa22.9■■□□□ 1.26
MSI2-207ENST00000579205 RIMBP3CA6NJZ7 1639 aa22.9■■□□□ 1.26
MSI2-207ENST00000579205 RIMBP3BA6NNM3 1639 aa22.9■■□□□ 1.26
MSI2-207ENST00000579205 RIMBP3Q9UFD9 1639 aa22.9■■□□□ 1.26
MSI2-207ENST00000579205 MTUS2Q5JR59 1369 aa22.89■■□□□ 1.26
MSI2-207ENST00000579205 ARID3CA6NKF2 412 aa22.89■■□□□ 1.25
MSI2-207ENST00000579205 PPARGC1BQ86YN6 1023 aaKnown RBP22.88■■□□□ 1.25
MSI2-207ENST00000579205 LRRIQ1Q96JM4 1722 aa22.88■■□□□ 1.25
MSI2-207ENST00000579205 CDK13Q14004 1512 aaKnown RBP22.87■■□□□ 1.25
MSI2-207ENST00000579205 LRRC9Q6ZRR7 1453 aa22.86■■□□□ 1.25
MSI2-207ENST00000579205 EHBP1L1Q8N3D4 1523 aa22.85■■□□□ 1.25
MSI2-207ENST00000579205 NPM1P06748 294 aaKnown RBP eCLIP22.82■■□□□ 1.24
MSI2-207ENST00000579205 ATP10BO94823 1461 aa22.8■■□□□ 1.24
MSI2-207ENST00000579205 ADCY10Q96PN6 1610 aa22.8■■□□□ 1.24
MSI2-207ENST00000579205 KANK4Q5T7N3 995 aaPredicted RBP22.79■■□□□ 1.24
MSI2-207ENST00000579205 PLEKHD1A6NEE1 506 aa22.78■■□□□ 1.24
MSI2-207ENST00000579205 KDM5BQ9UGL1 1544 aa22.77■■□□□ 1.24
MSI2-207ENST00000579205 SUPT6HQ7KZ85 1726 aaKnown RBP22.77■■□□□ 1.23
MSI2-207ENST00000579205 ZCCHC11Q5TAX3 1644 aaKnown RBP22.76■■□□□ 1.23
MSI2-207ENST00000579205 CYB5RLQ6IPT4 315 aa22.75■■□□□ 1.23
MSI2-207ENST00000579205 TROQ12816 1431 aaPredicted RBP22.74■■□□□ 1.23
MSI2-207ENST00000579205 KIF14Q15058 1648 aa22.7■■□□□ 1.22
MSI2-207ENST00000579205 MAGI3Q5TCQ9 1506 aa22.69■■□□□ 1.22
MSI2-207ENST00000579205 TRIM26Q12899 539 aaPredicted RBP22.69■■□□□ 1.22
MSI2-207ENST00000579205 NCOA2Q15596 1464 aa22.67■■□□□ 1.22
MSI2-207ENST00000579205 WDR7Q9Y4E6 1490 aa22.61■■□□□ 1.21
MSI2-207ENST00000579205 CCNB3Q8WWL7 1395 aa22.61■■□□□ 1.21
MSI2-207ENST00000579205 ASXL2Q76L83 1435 aa22.58■■□□□ 1.21
MSI2-207ENST00000579205 ITSN2Q9NZM3 1697 aa22.58■■□□□ 1.2
MSI2-207ENST00000579205 MYOM3Q5VTT5 1437 aa22.57■■□□□ 1.2
MSI2-207ENST00000579205 KCNH8Q96L42 1107 aa22.57■■□□□ 1.2
MSI2-207ENST00000579205 PHLDB1Q86UU1 1377 aa22.56■■□□□ 1.2
MSI2-207ENST00000579205 DNAJC5Q9H3Z4 198 aa22.56■■□□□ 1.2
MSI2-207ENST00000579205 MAPKBP1O60336 1514 aa22.54■■□□□ 1.2
MSI2-207ENST00000579205 FGD6Q6ZV73 1430 aa22.52■■□□□ 1.2
MSI2-207ENST00000579205 RRBP1Q9P2E9 1410 aaKnown RBP22.52■■□□□ 1.2
MSI2-207ENST00000579205 MIA2Q96PC5 1412 aa22.5■■□□□ 1.19
MSI2-207ENST00000579205 PCGF6Q9BYE7 350 aa22.5■■□□□ 1.19
MSI2-207ENST00000579205 ABCC10Q5T3U5 1492 aa22.48■■□□□ 1.19
MSI2-207ENST00000579205 FAM50AQ14320 339 aaKnown RBP22.48■■□□□ 1.19
MSI2-207ENST00000579205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.47■■□□□ 1.19
MSI2-207ENST00000579205 CFDP1Q9UEE9 299 aaPredicted RBP22.47■■□□□ 1.19
MSI2-207ENST00000579205 MYO5CQ9NQX4 1742 aa22.47■■□□□ 1.19
MSI2-207ENST00000579205 TTC37Q6PGP7 1564 aa22.46■■□□□ 1.19
MSI2-207ENST00000579205 GPATCH8Q9UKJ3 1502 aaKnown RBP22.45■■□□□ 1.18
MSI2-207ENST00000579205 PTPN23Q9H3S7 1636 aa22.45■■□□□ 1.18
MSI2-207ENST00000579205 CDC42BPAQ5VT25 1732 aa22.45■■□□□ 1.18
MSI2-207ENST00000579205 PREX2Q70Z35 1606 aa22.44■■□□□ 1.18
MSI2-207ENST00000579205 ABCA9Q8IUA7 1624 aa22.42■■□□□ 1.18
MSI2-207ENST00000579205 ARHGAP5Q13017 1502 aa22.42■■□□□ 1.18
MSI2-207ENST00000579205 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.42■■□□□ 1.18
MSI2-207ENST00000579205 ZNF777Q9ULD5 760 aaPredicted RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms