RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 CARMIL1Q5VZK9 1371 aa25■■□□□ 1.59
CCDC57-212ENST00000578910 CUL7Q14999 1698 aa24.94■■□□□ 1.58
CCDC57-212ENST00000578910 KIAA0586Q9BVV6 1533 aa24.92■■□□□ 1.58
CCDC57-212ENST00000578910 RUSC2Q8N2Y8 1516 aa24.91■■□□□ 1.58
CCDC57-212ENST00000578910 RAPGEF2Q9Y4G8 1499 aa24.76■■□□□ 1.55
CCDC57-212ENST00000578910 NPM1P06748 294 aaKnown RBP eCLIP24.75■■□□□ 1.55
CCDC57-212ENST00000578910 TTBK1Q5TCY1 1321 aaPredicted RBP24.73■■□□□ 1.55
CCDC57-212ENST00000578910 PTPRGP23470 1445 aa24.69■■□□□ 1.54
CCDC57-212ENST00000578910 CARMIL2Q6F5E8 1435 aa24.67■■□□□ 1.54
CCDC57-212ENST00000578910 IQGAP2Q13576 1575 aa24.66■■□□□ 1.54
CCDC57-212ENST00000578910 TNIKQ9UKE5 1360 aa24.65■■□□□ 1.54
CCDC57-212ENST00000578910 ADCY10Q96PN6 1610 aa24.61■■□□□ 1.53
CCDC57-212ENST00000578910 FAM69CQ0P6D2 419 aa24.59■■□□□ 1.53
CCDC57-212ENST00000578910 DISP1Q96F81 1524 aa24.58■■□□□ 1.53
CCDC57-212ENST00000578910 PRXQ9BXM0 1461 aa24.57■■□□□ 1.52
CCDC57-212ENST00000578910 CSRNP3Q8WYN3 585 aa24.56■■□□□ 1.52
CCDC57-212ENST00000578910 UGGT2Q9NYU1 1516 aa24.54■■□□□ 1.52
CCDC57-212ENST00000578910 ABCC10Q5T3U5 1492 aa24.52■■□□□ 1.52
CCDC57-212ENST00000578910 KIF13AQ9H1H9 1805 aa24.51■■□□□ 1.51
CCDC57-212ENST00000578910 MAPKBP1O60336 1514 aa24.51■■□□□ 1.51
CCDC57-212ENST00000578910 UACAQ9BZF9 1416 aa24.47■■□□□ 1.51
CCDC57-212ENST00000578910 ABCC2Q92887 1545 aa24.45■■□□□ 1.5
CCDC57-212ENST00000578910 FAM9AQ8IZU1 332 aaPredicted RBP24.44■■□□□ 1.5
CCDC57-212ENST00000578910 UHRF1BP1LA0JNW5 1464 aa24.44■■□□□ 1.5
CCDC57-212ENST00000578910 CTTNBP2Q8WZ74 1663 aa24.43■■□□□ 1.5
CCDC57-212ENST00000578910 KIAA0556O60303 1618 aa24.43■■□□□ 1.5
CCDC57-212ENST00000578910 DIP2BQ9P265 1576 aa24.4■■□□□ 1.5
CCDC57-212ENST00000578910 CHIC1Q5VXU3 224 aa24.39■■□□□ 1.49
CCDC57-212ENST00000578910 P3H3Q8IVL6 736 aa24.37■■□□□ 1.49
CCDC57-212ENST00000578910 GOLGA3Q08378 1498 aa24.37■■□□□ 1.49
CCDC57-212ENST00000578910 EEA1Q15075 1411 aa24.36■■□□□ 1.49
CCDC57-212ENST00000578910 ASXL2Q76L83 1435 aa24.36■■□□□ 1.49
CCDC57-212ENST00000578910 KDM5BQ9UGL1 1544 aa24.34■■□□□ 1.49
CCDC57-212ENST00000578910 PLB1Q6P1J6 1458 aa24.33■■□□□ 1.49
CCDC57-212ENST00000578910 TSPOAP1O95153 1857 aa24.26■■□□□ 1.47
CCDC57-212ENST00000578910 RANGAP1P46060 587 aaPredicted RBP24.26■■□□□ 1.47
CCDC57-212ENST00000578910 ZCCHC11Q5TAX3 1644 aaKnown RBP24.23■■□□□ 1.47
CCDC57-212ENST00000578910 ABCA8O94911 1581 aa24.22■■□□□ 1.47
CCDC57-212ENST00000578910 GLI2P10070 1586 aa24.21■■□□□ 1.47
CCDC57-212ENST00000578910 EPRSP07814 1512 aaKnown RBP24.2■■□□□ 1.47
CCDC57-212ENST00000578910 EHMT2Q96KQ7 1210 aa24.19■■□□□ 1.46
CCDC57-212ENST00000578910 KCNH8Q96L42 1107 aa24.19■■□□□ 1.46
CCDC57-212ENST00000578910 ARID3CA6NKF2 412 aa24.18■■□□□ 1.46
CCDC57-212ENST00000578910 AEBP2Q6ZN18 517 aaPredicted RBP24.18■■□□□ 1.46
CCDC57-212ENST00000578910 KDM6BO15054 1643 aa24.13■■□□□ 1.45
CCDC57-212ENST00000578910 WDR7Q9Y4E6 1490 aa24.13■■□□□ 1.45
CCDC57-212ENST00000578910 SAMD9Q5K651 1589 aa24.12■■□□□ 1.45
CCDC57-212ENST00000578910 UBTFP17480 764 aaKnown RBP24.11■■□□□ 1.45
CCDC57-212ENST00000578910 KIF21BO75037 1637 aa24.1■■□□□ 1.45
CCDC57-212ENST00000578910 ATP10BO94823 1461 aa24.1■■□□□ 1.45
CCDC57-212ENST00000578910 PPRC1Q5VV67 1664 aaKnown RBP24.1■■□□□ 1.45
CCDC57-212ENST00000578910 MAP3K4Q9Y6R4 1608 aa24.06■■□□□ 1.44
CCDC57-212ENST00000578910 FHOD3Q2V2M9 1422 aa24.05■■□□□ 1.44
CCDC57-212ENST00000578910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.05■■□□□ 1.44
CCDC57-212ENST00000578910 HNRNPUL2Q1KMD3 747 aaKnown RBP24.05■■□□□ 1.44
CCDC57-212ENST00000578910 COL17A1Q9UMD9 1497 aaPredicted RBP24.03■■□□□ 1.44
CCDC57-212ENST00000578910 CD109Q6YHK3 1445 aa24.02■■□□□ 1.44
CCDC57-212ENST00000578910 RAPGEF6Q8TEU7 1601 aa24■■□□□ 1.43
CCDC57-212ENST00000578910 TEX14Q8IWB6 1497 aa24■■□□□ 1.43
CCDC57-212ENST00000578910 NUP153P49790 1475 aaKnown RBP23.94■■□□□ 1.42
CCDC57-212ENST00000578910 MAGI3Q5TCQ9 1506 aa23.94■■□□□ 1.42
CCDC57-212ENST00000578910 KDM4FA0A1W2PPD8 638 aa23.93■■□□□ 1.42
CCDC57-212ENST00000578910 EFCAB5A4FU69 1503 aa23.92■■□□□ 1.42
CCDC57-212ENST00000578910 CFAP43Q8NDM7 1665 aa23.92■■□□□ 1.42
CCDC57-212ENST00000578910 PLEKHD1A6NEE1 506 aa23.91■■□□□ 1.42
CCDC57-212ENST00000578910 ATP1B4Q9UN42 357 aaPredicted RBP23.87■■□□□ 1.41
CCDC57-212ENST00000578910 ARHGAP35Q9NRY4 1499 aa23.85■■□□□ 1.41
CCDC57-212ENST00000578910 ABCA9Q8IUA7 1624 aa23.81■■□□□ 1.4
CCDC57-212ENST00000578910 FMN1Q68DA7 1419 aa23.78■■□□□ 1.4
CCDC57-212ENST00000578910 PHLDB1Q86UU1 1377 aa23.76■■□□□ 1.39
CCDC57-212ENST00000578910 ARAP3Q8WWN8 1544 aa23.75■■□□□ 1.39
CCDC57-212ENST00000578910 RAPGEF3O95398 923 aa23.74■■□□□ 1.39
CCDC57-212ENST00000578910 CDK13Q14004 1512 aaKnown RBP23.74■■□□□ 1.39
CCDC57-212ENST00000578910 NEO1Q92859 1461 aa23.69■■□□□ 1.38
CCDC57-212ENST00000578910 CDK11AQ9UQ88 783 aaPredicted RBP23.69■■□□□ 1.38
CCDC57-212ENST00000578910 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.68■■□□□ 1.38
CCDC57-212ENST00000578910 ADGRL1O94910 1474 aa23.68■■□□□ 1.38
CCDC57-212ENST00000578910 HECW1Q76N89 1606 aa23.64■■□□□ 1.38
CCDC57-212ENST00000578910 AKNAQ7Z591 1439 aa23.63■■□□□ 1.37
CCDC57-212ENST00000578910 FANCAO15360 1455 aa23.6■■□□□ 1.37
CCDC57-212ENST00000578910 TTC37Q6PGP7 1564 aa23.59■■□□□ 1.37
CCDC57-212ENST00000578910 PLCH2O75038 1416 aa23.58■■□□□ 1.36
CCDC57-212ENST00000578910 CLIP1P30622 1438 aa23.58■■□□□ 1.36
CCDC57-212ENST00000578910 CASKIN1Q8WXD9 1431 aa23.57■■□□□ 1.36
CCDC57-212ENST00000578910 DENND4BO75064 1496 aaPredicted RBP23.56■■□□□ 1.36
CCDC57-212ENST00000578910 EFCAB2Q5VUJ9 269 aa23.55■■□□□ 1.36
CCDC57-212ENST00000578910 TROQ12816 1431 aaPredicted RBP23.55■■□□□ 1.36
CCDC57-212ENST00000578910 LRRIQ1Q96JM4 1722 aa23.54■■□□□ 1.36
CCDC57-212ENST00000578910 FRMPD1Q5SYB0 1578 aa23.52■■□□□ 1.36
CCDC57-212ENST00000578910 SCAPERQ9BY12 1400 aa23.5■■□□□ 1.35
CCDC57-212ENST00000578910 PCF11O94913 1555 aaKnown RBP23.48■■□□□ 1.35
CCDC57-212ENST00000578910 KIF14Q15058 1648 aa23.48■■□□□ 1.35
CCDC57-212ENST00000578910 ARID4BQ4LE39 1312 aaPredicted RBP23.48■■□□□ 1.35
CCDC57-212ENST00000578910 CFAP74Q9C0B2 1584 aa23.48■■□□□ 1.35
CCDC57-212ENST00000578910 CCDC18Q5T9S5 1454 aa23.47■■□□□ 1.35
CCDC57-212ENST00000578910 LOC105371045A0A1W2PR82 267 aa23.46■■□□□ 1.35
CCDC57-212ENST00000578910 RICTORQ6R327 1708 aa23.45■■□□□ 1.34
CCDC57-212ENST00000578910 FYCO1Q9BQS8 1478 aa23.43■■□□□ 1.34
CCDC57-212ENST00000578910 MYO5CQ9NQX4 1742 aa23.42■■□□□ 1.34
CCDC57-212ENST00000578910 AFAP1Q8N556 730 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms