RNA–Protein interactions for RNA: ENST00000578446.1

USP22-208, Transcript of ubiquitin specific peptidase 22, humanhuman

TSL 3

Gene USP22, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-208ENST00000578446 KIAA0586Q9BVV6 1533 aa17.36■□□□□ 0.37
USP22-208ENST00000578446 CLASP1Q7Z460 1538 aa17.35■□□□□ 0.37
USP22-208ENST00000578446 IQGAP2Q13576 1575 aa17.32■□□□□ 0.36
USP22-208ENST00000578446 CTTNBP2Q8WZ74 1663 aa17.32■□□□□ 0.36
USP22-208ENST00000578446 LOC105371045A0A1W2PR82 267 aa17.3■□□□□ 0.36
USP22-208ENST00000578446 TNIKQ9UKE5 1360 aa17.28■□□□□ 0.36
USP22-208ENST00000578446 JPH4Q96JJ6 628 aa17.25■□□□□ 0.35
USP22-208ENST00000578446 RANGAP1P46060 587 aaPredicted RBP17.24■□□□□ 0.35
USP22-208ENST00000578446 SHROOM2Q13796 1616 aa17.23■□□□□ 0.35
USP22-208ENST00000578446 UGGT2Q9NYU1 1516 aa17.22■□□□□ 0.35
USP22-208ENST00000578446 PRG4Q92954 1404 aaPredicted RBP17.21■□□□□ 0.35
USP22-208ENST00000578446 CARMIL2Q6F5E8 1435 aa17.19■□□□□ 0.34
USP22-208ENST00000578446 CEP162Q5TB80 1403 aa17.16■□□□□ 0.34
USP22-208ENST00000578446 EFCAB5A4FU69 1503 aa17.16■□□□□ 0.34
USP22-208ENST00000578446 DISP1Q96F81 1524 aa17.16■□□□□ 0.34
USP22-208ENST00000578446 CLIP1P30622 1438 aa17.15■□□□□ 0.34
USP22-208ENST00000578446 ARHGEF11O15085 1522 aa17.15■□□□□ 0.34
USP22-208ENST00000578446 KIAA0556O60303 1618 aa17.14■□□□□ 0.33
USP22-208ENST00000578446 ERCC6L2Q5T890 1561 aa17.14■□□□□ 0.33
USP22-208ENST00000578446 SAMD9Q5K651 1589 aa17.13■□□□□ 0.33
USP22-208ENST00000578446 P3H3Q8IVL6 736 aa17.11■□□□□ 0.33
USP22-208ENST00000578446 DNAJC5Q9H3Z4 198 aa17.11■□□□□ 0.33
USP22-208ENST00000578446 ARHGAP35Q9NRY4 1499 aa17.11■□□□□ 0.33
USP22-208ENST00000578446 FHOD3Q2V2M9 1422 aa17.09■□□□□ 0.33
USP22-208ENST00000578446 RIMBP3CA6NJZ7 1639 aa17.09■□□□□ 0.33
USP22-208ENST00000578446 RIMBP3BA6NNM3 1639 aa17.09■□□□□ 0.33
USP22-208ENST00000578446 RIMBP3Q9UFD9 1639 aa17.09■□□□□ 0.33
USP22-208ENST00000578446 TTBK1Q5TCY1 1321 aaPredicted RBP17.08■□□□□ 0.32
USP22-208ENST00000578446 PTPRGP23470 1445 aa17.05■□□□□ 0.32
USP22-208ENST00000578446 ARAP1Q96P48 1450 aa17.04■□□□□ 0.32
USP22-208ENST00000578446 FMN1Q68DA7 1419 aa17■□□□□ 0.31
USP22-208ENST00000578446 CYB5RLQ6IPT4 315 aa16.98■□□□□ 0.31
USP22-208ENST00000578446 PLB1Q6P1J6 1458 aa16.96■□□□□ 0.31
USP22-208ENST00000578446 UACAQ9BZF9 1416 aa16.95■□□□□ 0.3
USP22-208ENST00000578446 VPS8Q8N3P4 1428 aa16.92■□□□□ 0.3
USP22-208ENST00000578446 ABCA8O94911 1581 aa16.92■□□□□ 0.3
USP22-208ENST00000578446 ABCC2Q92887 1545 aa16.91■□□□□ 0.3
USP22-208ENST00000578446 RAPGEF6Q8TEU7 1601 aa16.91■□□□□ 0.3
USP22-208ENST00000578446 PCF11O94913 1555 aaKnown RBP16.9■□□□□ 0.3
USP22-208ENST00000578446 UHRF1BP1LA0JNW5 1464 aa16.9■□□□□ 0.3
USP22-208ENST00000578446 CASKIN1Q8WXD9 1431 aa16.89■□□□□ 0.29
USP22-208ENST00000578446 FYCO1Q9BQS8 1478 aa16.89■□□□□ 0.29
USP22-208ENST00000578446 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.29
USP22-208ENST00000578446 ADCY10Q96PN6 1610 aa16.88■□□□□ 0.29
USP22-208ENST00000578446 HECW1Q76N89 1606 aa16.88■□□□□ 0.29
USP22-208ENST00000578446 NUP153P49790 1475 aaKnown RBP16.86■□□□□ 0.29
USP22-208ENST00000578446 ARID3CA6NKF2 412 aa16.86■□□□□ 0.29
USP22-208ENST00000578446 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.28
USP22-208ENST00000578446 KDM5BQ9UGL1 1544 aa16.81■□□□□ 0.28
USP22-208ENST00000578446 EPRSP07814 1512 aaKnown RBP16.8■□□□□ 0.28
USP22-208ENST00000578446 CCDC18Q5T9S5 1454 aa16.8■□□□□ 0.28
USP22-208ENST00000578446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
USP22-208ENST00000578446 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
USP22-208ENST00000578446 CDK13Q14004 1512 aaKnown RBP16.79■□□□□ 0.28
USP22-208ENST00000578446 ATP10BO94823 1461 aa16.79■□□□□ 0.28
USP22-208ENST00000578446 ZCCHC11Q5TAX3 1644 aaKnown RBP16.78■□□□□ 0.28
USP22-208ENST00000578446 APLP2Q06481 763 aa16.76■□□□□ 0.27
USP22-208ENST00000578446 ASXL2Q76L83 1435 aa16.72■□□□□ 0.27
USP22-208ENST00000578446 MAPKBP1O60336 1514 aa16.72■□□□□ 0.27
USP22-208ENST00000578446 CDK11AQ9UQ88 783 aaPredicted RBP16.72■□□□□ 0.27
USP22-208ENST00000578446 LRRIQ1Q96JM4 1722 aa16.71■□□□□ 0.27
USP22-208ENST00000578446 TIAM1Q13009 1591 aa16.71■□□□□ 0.27
USP22-208ENST00000578446 CFAP43Q8NDM7 1665 aa16.71■□□□□ 0.27
USP22-208ENST00000578446 WDR7Q9Y4E6 1490 aa16.7■□□□□ 0.26
USP22-208ENST00000578446 MAP3K1Q13233 1512 aa16.7■□□□□ 0.26
USP22-208ENST00000578446 PLEKHD1A6NEE1 506 aa16.69■□□□□ 0.26
USP22-208ENST00000578446 MTUS2Q5JR59 1369 aa16.68■□□□□ 0.26
USP22-208ENST00000578446 TROQ12816 1431 aaPredicted RBP16.66■□□□□ 0.26
USP22-208ENST00000578446 MAGI3Q5TCQ9 1506 aa16.65■□□□□ 0.26
USP22-208ENST00000578446 EHBP1L1Q8N3D4 1523 aa16.65■□□□□ 0.26
USP22-208ENST00000578446 LRRC9Q6ZRR7 1453 aa16.64■□□□□ 0.25
USP22-208ENST00000578446 KCNH8Q96L42 1107 aa16.63■□□□□ 0.25
USP22-208ENST00000578446 KIF14Q15058 1648 aa16.61■□□□□ 0.25
USP22-208ENST00000578446 KANK4Q5T7N3 995 aaPredicted RBP16.61■□□□□ 0.25
USP22-208ENST00000578446 ABCC10Q5T3U5 1492 aa16.6■□□□□ 0.25
USP22-208ENST00000578446 DIP2BQ9P265 1576 aa16.57■□□□□ 0.24
USP22-208ENST00000578446 FAM69CQ0P6D2 419 aa16.56■□□□□ 0.24
USP22-208ENST00000578446 PPARGC1BQ86YN6 1023 aaKnown RBP16.56■□□□□ 0.24
USP22-208ENST00000578446 NCOA2Q15596 1464 aa16.54■□□□□ 0.24
USP22-208ENST00000578446 SUPT6HQ7KZ85 1726 aaKnown RBP16.54■□□□□ 0.24
USP22-208ENST00000578446 TRHP20396 242 aaPredicted RBP16.54■□□□□ 0.24
USP22-208ENST00000578446 GLI2P10070 1586 aa16.54■□□□□ 0.24
USP22-208ENST00000578446 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.54■□□□□ 0.24
USP22-208ENST00000578446 TTC37Q6PGP7 1564 aa16.53■□□□□ 0.24
USP22-208ENST00000578446 ABCA9Q8IUA7 1624 aa16.52■□□□□ 0.23
USP22-208ENST00000578446 CCNB3Q8WWL7 1395 aa16.51■□□□□ 0.23
USP22-208ENST00000578446 CD109Q6YHK3 1445 aa16.5■□□□□ 0.23
USP22-208ENST00000578446 MAP3K4Q9Y6R4 1608 aa16.47■□□□□ 0.23
USP22-208ENST00000578446 KIF13AQ9H1H9 1805 aa16.46■□□□□ 0.23
USP22-208ENST00000578446 PHLDB1Q86UU1 1377 aa16.46■□□□□ 0.23
USP22-208ENST00000578446 GPATCH8Q9UKJ3 1502 aaKnown RBP16.45■□□□□ 0.22
USP22-208ENST00000578446 ARHGAP5Q13017 1502 aa16.45■□□□□ 0.22
USP22-208ENST00000578446 PLCH2O75038 1416 aa16.45■□□□□ 0.22
USP22-208ENST00000578446 MYOM3Q5VTT5 1437 aa16.45■□□□□ 0.22
USP22-208ENST00000578446 MYO5CQ9NQX4 1742 aa16.44■□□□□ 0.22
USP22-208ENST00000578446 PREX2Q70Z35 1606 aa16.44■□□□□ 0.22
USP22-208ENST00000578446 ITSN2Q9NZM3 1697 aa16.43■□□□□ 0.22
USP22-208ENST00000578446 CFDP1Q9UEE9 299 aaPredicted RBP16.43■□□□□ 0.22
USP22-208ENST00000578446 ARAP3Q8WWN8 1544 aa16.43■□□□□ 0.22
USP22-208ENST00000578446 FANCAO15360 1455 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms