RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 SHROOM2Q13796 1616 aa21.21■□□□□ 0.99
CDK5RAP3-203ENST00000577442 PRXQ9BXM0 1461 aa21.2■□□□□ 0.98
CDK5RAP3-203ENST00000577442 CSRNP3Q8WYN3 585 aa21.18■□□□□ 0.98
CDK5RAP3-203ENST00000577442 ARAP1Q96P48 1450 aa21.13■□□□□ 0.97
CDK5RAP3-203ENST00000577442 IQGAP2Q13576 1575 aa21.12■□□□□ 0.97
CDK5RAP3-203ENST00000577442 JPH4Q96JJ6 628 aa21.12■□□□□ 0.97
CDK5RAP3-203ENST00000577442 PRG4Q92954 1404 aaPredicted RBP21.1■□□□□ 0.97
CDK5RAP3-203ENST00000577442 FAM9AQ8IZU1 332 aaPredicted RBP21.09■□□□□ 0.97
CDK5RAP3-203ENST00000577442 CTTNBP2Q8WZ74 1663 aa21.09■□□□□ 0.97
CDK5RAP3-203ENST00000577442 ERCC6L2Q5T890 1561 aa21.07■□□□□ 0.96
CDK5RAP3-203ENST00000577442 KIF21BO75037 1637 aa21.06■□□□□ 0.96
CDK5RAP3-203ENST00000577442 CYB5RLQ6IPT4 315 aa21.05■□□□□ 0.96
CDK5RAP3-203ENST00000577442 CARMIL2Q6F5E8 1435 aa21.01■□□□□ 0.95
CDK5RAP3-203ENST00000577442 UGGT2Q9NYU1 1516 aa21■□□□□ 0.95
CDK5RAP3-203ENST00000577442 GOLGA3Q08378 1498 aa20.94■□□□□ 0.94
CDK5RAP3-203ENST00000577442 DISP1Q96F81 1524 aa20.92■□□□□ 0.94
CDK5RAP3-203ENST00000577442 KIAA0556O60303 1618 aa20.91■□□□□ 0.94
CDK5RAP3-203ENST00000577442 TNIKQ9UKE5 1360 aa20.9■□□□□ 0.94
CDK5RAP3-203ENST00000577442 PTPRGP23470 1445 aa20.87■□□□□ 0.93
CDK5RAP3-203ENST00000577442 UBTFP17480 764 aaKnown RBP20.82■□□□□ 0.92
CDK5RAP3-203ENST00000577442 SAMD9Q5K651 1589 aa20.8■□□□□ 0.92
CDK5RAP3-203ENST00000577442 EHMT2Q96KQ7 1210 aa20.77■□□□□ 0.92
CDK5RAP3-203ENST00000577442 ADCY10Q96PN6 1610 aa20.77■□□□□ 0.92
CDK5RAP3-203ENST00000577442 EFCAB5A4FU69 1503 aa20.77■□□□□ 0.92
CDK5RAP3-203ENST00000577442 TTBK1Q5TCY1 1321 aaPredicted RBP20.77■□□□□ 0.91
CDK5RAP3-203ENST00000577442 UACAQ9BZF9 1416 aa20.74■□□□□ 0.91
CDK5RAP3-203ENST00000577442 UHRF1BP1LA0JNW5 1464 aa20.74■□□□□ 0.91
CDK5RAP3-203ENST00000577442 ABCC2Q92887 1545 aa20.73■□□□□ 0.91
CDK5RAP3-203ENST00000577442 NPM1P06748 294 aaKnown RBP eCLIP20.72■□□□□ 0.91
CDK5RAP3-203ENST00000577442 RANGAP1P46060 587 aaPredicted RBP20.69■□□□□ 0.9
CDK5RAP3-203ENST00000577442 P3H3Q8IVL6 736 aa20.67■□□□□ 0.9
CDK5RAP3-203ENST00000577442 MAPKBP1O60336 1514 aa20.66■□□□□ 0.9
CDK5RAP3-203ENST00000577442 ABCA8O94911 1581 aa20.66■□□□□ 0.9
CDK5RAP3-203ENST00000577442 PLB1Q6P1J6 1458 aa20.65■□□□□ 0.9
CDK5RAP3-203ENST00000577442 FHOD3Q2V2M9 1422 aa20.65■□□□□ 0.9
CDK5RAP3-203ENST00000577442 KDM5BQ9UGL1 1544 aa20.62■□□□□ 0.89
CDK5RAP3-203ENST00000577442 TRHP20396 242 aaPredicted RBP20.61■□□□□ 0.89
CDK5RAP3-203ENST00000577442 ARHGAP35Q9NRY4 1499 aa20.61■□□□□ 0.89
CDK5RAP3-203ENST00000577442 RAPGEF6Q8TEU7 1601 aa20.59■□□□□ 0.89
CDK5RAP3-203ENST00000577442 ZCCHC11Q5TAX3 1644 aaKnown RBP20.58■□□□□ 0.89
CDK5RAP3-203ENST00000577442 FMN1Q68DA7 1419 aa20.56■□□□□ 0.88
CDK5RAP3-203ENST00000577442 CLIP1P30622 1438 aa20.54■□□□□ 0.88
CDK5RAP3-203ENST00000577442 ASXL2Q76L83 1435 aa20.53■□□□□ 0.88
CDK5RAP3-203ENST00000577442 ABCC10Q5T3U5 1492 aa20.52■□□□□ 0.88
CDK5RAP3-203ENST00000577442 DIP2BQ9P265 1576 aa20.51■□□□□ 0.87
CDK5RAP3-203ENST00000577442 KIF13AQ9H1H9 1805 aa20.5■□□□□ 0.87
CDK5RAP3-203ENST00000577442 NUP153P49790 1475 aaKnown RBP20.49■□□□□ 0.87
CDK5RAP3-203ENST00000577442 CEP162Q5TB80 1403 aa20.47■□□□□ 0.87
CDK5RAP3-203ENST00000577442 WDR7Q9Y4E6 1490 aa20.47■□□□□ 0.87
CDK5RAP3-203ENST00000577442 HECW1Q76N89 1606 aa20.46■□□□□ 0.87
CDK5RAP3-203ENST00000577442 ATP10BO94823 1461 aa20.45■□□□□ 0.86
CDK5RAP3-203ENST00000577442 FAM69CQ0P6D2 419 aa20.44■□□□□ 0.86
CDK5RAP3-203ENST00000577442 LOC105371045A0A1W2PR82 267 aa20.43■□□□□ 0.86
CDK5RAP3-203ENST00000577442 GLI2P10070 1586 aa20.42■□□□□ 0.86
CDK5RAP3-203ENST00000577442 ARID3CA6NKF2 412 aa20.41■□□□□ 0.86
CDK5RAP3-203ENST00000577442 EPRSP07814 1512 aaKnown RBP20.41■□□□□ 0.86
CDK5RAP3-203ENST00000577442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.4■□□□□ 0.86
CDK5RAP3-203ENST00000577442 HNRNPUL2Q1KMD3 747 aaKnown RBP20.4■□□□□ 0.86
CDK5RAP3-203ENST00000577442 CASKIN1Q8WXD9 1431 aa20.39■□□□□ 0.85
CDK5RAP3-203ENST00000577442 PCF11O94913 1555 aaKnown RBP20.38■□□□□ 0.85
CDK5RAP3-203ENST00000577442 FYCO1Q9BQS8 1478 aa20.37■□□□□ 0.85
CDK5RAP3-203ENST00000577442 ATP1B4Q9UN42 357 aaPredicted RBP20.36■□□□□ 0.85
CDK5RAP3-203ENST00000577442 CDK13Q14004 1512 aaKnown RBP20.34■□□□□ 0.85
CDK5RAP3-203ENST00000577442 CCDC18Q5T9S5 1454 aa20.34■□□□□ 0.85
CDK5RAP3-203ENST00000577442 TSPOAP1O95153 1857 aa20.32■□□□□ 0.84
CDK5RAP3-203ENST00000577442 MAP3K4Q9Y6R4 1608 aa20.31■□□□□ 0.84
CDK5RAP3-203ENST00000577442 PLEKHD1A6NEE1 506 aa20.31■□□□□ 0.84
CDK5RAP3-203ENST00000577442 CFAP43Q8NDM7 1665 aa20.31■□□□□ 0.84
CDK5RAP3-203ENST00000577442 KCNH8Q96L42 1107 aa20.3■□□□□ 0.84
CDK5RAP3-203ENST00000577442 CDK11AQ9UQ88 783 aaPredicted RBP20.3■□□□□ 0.84
CDK5RAP3-203ENST00000577442 LRRIQ1Q96JM4 1722 aa20.27■□□□□ 0.84
CDK5RAP3-203ENST00000577442 ABCA9Q8IUA7 1624 aa20.27■□□□□ 0.83
CDK5RAP3-203ENST00000577442 TEX14Q8IWB6 1497 aa20.26■□□□□ 0.83
CDK5RAP3-203ENST00000577442 CD109Q6YHK3 1445 aa20.25■□□□□ 0.83
CDK5RAP3-203ENST00000577442 PPRC1Q5VV67 1664 aaKnown RBP20.25■□□□□ 0.83
CDK5RAP3-203ENST00000577442 VPS8Q8N3P4 1428 aa20.23■□□□□ 0.83
CDK5RAP3-203ENST00000577442 TROQ12816 1431 aaPredicted RBP20.22■□□□□ 0.83
CDK5RAP3-203ENST00000577442 MAGI3Q5TCQ9 1506 aa20.22■□□□□ 0.83
CDK5RAP3-203ENST00000577442 KIF14Q15058 1648 aa20.2■□□□□ 0.82
CDK5RAP3-203ENST00000577442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.17■□□□□ 0.82
CDK5RAP3-203ENST00000577442 KDM6BO15054 1643 aa20.16■□□□□ 0.82
CDK5RAP3-203ENST00000577442 TTC37Q6PGP7 1564 aa20.16■□□□□ 0.82
CDK5RAP3-203ENST00000577442 PHLDB1Q86UU1 1377 aa20.11■□□□□ 0.81
CDK5RAP3-203ENST00000577442 NEO1Q92859 1461 aa20.11■□□□□ 0.81
CDK5RAP3-203ENST00000577442 MTUS2Q5JR59 1369 aa20.1■□□□□ 0.81
CDK5RAP3-203ENST00000577442 CFAP74Q9C0B2 1584 aa20.1■□□□□ 0.81
CDK5RAP3-203ENST00000577442 EHBP1L1Q8N3D4 1523 aa20.1■□□□□ 0.81
CDK5RAP3-203ENST00000577442 MYO5CQ9NQX4 1742 aa20.1■□□□□ 0.81
CDK5RAP3-203ENST00000577442 TIAM1Q13009 1591 aa20.08■□□□□ 0.81
CDK5RAP3-203ENST00000577442 ARAP3Q8WWN8 1544 aa20.08■□□□□ 0.81
CDK5RAP3-203ENST00000577442 MAP3K1Q13233 1512 aa20.07■□□□□ 0.8
CDK5RAP3-203ENST00000577442 PLCH2O75038 1416 aa20.06■□□□□ 0.8
CDK5RAP3-203ENST00000577442 FANCAO15360 1455 aa20.05■□□□□ 0.8
CDK5RAP3-203ENST00000577442 PREX2Q70Z35 1606 aa20.02■□□□□ 0.79
CDK5RAP3-203ENST00000577442 APLP2Q06481 763 aa20.01■□□□□ 0.79
CDK5RAP3-203ENST00000577442 ARHGAP5Q13017 1502 aa20.01■□□□□ 0.79
CDK5RAP3-203ENST00000577442 COL17A1Q9UMD9 1497 aaPredicted RBP20■□□□□ 0.79
CDK5RAP3-203ENST00000577442 AKNAQ7Z591 1439 aa20■□□□□ 0.79
CDK5RAP3-203ENST00000577442 EFCAB2Q5VUJ9 269 aa19.99■□□□□ 0.79
CDK5RAP3-203ENST00000577442 CDC42BPAQ5VT25 1732 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms