RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 RAPGEF2Q9Y4G8 1499 aa26.3■■□□□ 1.8
NCBP3-207ENST00000577169 CSRNP3Q8WYN3 585 aa26.28■■□□□ 1.8
NCBP3-207ENST00000577169 KIAA0586Q9BVV6 1533 aa26.27■■□□□ 1.8
NCBP3-207ENST00000577169 SHROOM2Q13796 1616 aa26.26■■□□□ 1.79
NCBP3-207ENST00000577169 ERCC6L2Q5T890 1561 aa26.24■■□□□ 1.79
NCBP3-207ENST00000577169 FAM9AQ8IZU1 332 aaPredicted RBP26.24■■□□□ 1.79
NCBP3-207ENST00000577169 PRG4Q92954 1404 aaPredicted RBP26.22■■□□□ 1.79
NCBP3-207ENST00000577169 PRXQ9BXM0 1461 aa26.2■■□□□ 1.78
NCBP3-207ENST00000577169 EEA1Q15075 1411 aa26.19■■□□□ 1.78
NCBP3-207ENST00000577169 IQGAP2Q13576 1575 aa26.08■■□□□ 1.77
NCBP3-207ENST00000577169 CTTNBP2Q8WZ74 1663 aa25.99■■□□□ 1.75
NCBP3-207ENST00000577169 CARMIL2Q6F5E8 1435 aa25.99■■□□□ 1.75
NCBP3-207ENST00000577169 TTBK1Q5TCY1 1321 aaPredicted RBP25.96■■□□□ 1.75
NCBP3-207ENST00000577169 UGGT2Q9NYU1 1516 aa25.96■■□□□ 1.75
NCBP3-207ENST00000577169 DISP1Q96F81 1524 aa25.93■■□□□ 1.74
NCBP3-207ENST00000577169 TNIKQ9UKE5 1360 aa25.93■■□□□ 1.74
NCBP3-207ENST00000577169 PTPRGP23470 1445 aa25.92■■□□□ 1.74
NCBP3-207ENST00000577169 EHMT2Q96KQ7 1210 aa25.92■■□□□ 1.74
NCBP3-207ENST00000577169 KIF21BO75037 1637 aa25.9■■□□□ 1.74
NCBP3-207ENST00000577169 TRHP20396 242 aaPredicted RBP25.84■■□□□ 1.73
NCBP3-207ENST00000577169 UBTFP17480 764 aaKnown RBP25.83■■□□□ 1.73
NCBP3-207ENST00000577169 KIAA0556O60303 1618 aa25.83■■□□□ 1.73
NCBP3-207ENST00000577169 GOLGA3Q08378 1498 aa25.82■■□□□ 1.72
NCBP3-207ENST00000577169 RANGAP1P46060 587 aaPredicted RBP25.81■■□□□ 1.72
NCBP3-207ENST00000577169 NPM1P06748 294 aaKnown RBP eCLIP25.8■■□□□ 1.72
NCBP3-207ENST00000577169 P3H3Q8IVL6 736 aa25.8■■□□□ 1.72
NCBP3-207ENST00000577169 ADCY10Q96PN6 1610 aa25.77■■□□□ 1.72
NCBP3-207ENST00000577169 UACAQ9BZF9 1416 aa25.72■■□□□ 1.71
NCBP3-207ENST00000577169 UHRF1BP1LA0JNW5 1464 aa25.67■■□□□ 1.7
NCBP3-207ENST00000577169 SAMD9Q5K651 1589 aa25.66■■□□□ 1.7
NCBP3-207ENST00000577169 ABCC2Q92887 1545 aa25.63■■□□□ 1.69
NCBP3-207ENST00000577169 PLB1Q6P1J6 1458 aa25.63■■□□□ 1.69
NCBP3-207ENST00000577169 ABCA8O94911 1581 aa25.58■■□□□ 1.69
NCBP3-207ENST00000577169 MAPKBP1O60336 1514 aa25.58■■□□□ 1.68
NCBP3-207ENST00000577169 FHOD3Q2V2M9 1422 aa25.57■■□□□ 1.68
NCBP3-207ENST00000577169 KDM5BQ9UGL1 1544 aa25.55■■□□□ 1.68
NCBP3-207ENST00000577169 EFCAB5A4FU69 1503 aa25.54■■□□□ 1.68
NCBP3-207ENST00000577169 FAM69CQ0P6D2 419 aa25.53■■□□□ 1.68
NCBP3-207ENST00000577169 ABCC10Q5T3U5 1492 aa25.5■■□□□ 1.67
NCBP3-207ENST00000577169 ZCCHC11Q5TAX3 1644 aaKnown RBP25.49■■□□□ 1.67
NCBP3-207ENST00000577169 ASXL2Q76L83 1435 aa25.49■■□□□ 1.67
NCBP3-207ENST00000577169 ARHGAP35Q9NRY4 1499 aa25.48■■□□□ 1.67
NCBP3-207ENST00000577169 ARID3CA6NKF2 412 aa25.48■■□□□ 1.67
NCBP3-207ENST00000577169 KIF13AQ9H1H9 1805 aa25.48■■□□□ 1.67
NCBP3-207ENST00000577169 LOC105371045A0A1W2PR82 267 aa25.45■■□□□ 1.66
NCBP3-207ENST00000577169 RAPGEF6Q8TEU7 1601 aa25.44■■□□□ 1.66
NCBP3-207ENST00000577169 ATP10BO94823 1461 aa25.42■■□□□ 1.66
NCBP3-207ENST00000577169 DIP2BQ9P265 1576 aa25.42■■□□□ 1.66
NCBP3-207ENST00000577169 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.38■■□□□ 1.65
NCBP3-207ENST00000577169 HNRNPUL2Q1KMD3 747 aaKnown RBP25.38■■□□□ 1.65
NCBP3-207ENST00000577169 KCNH8Q96L42 1107 aa25.36■■□□□ 1.65
NCBP3-207ENST00000577169 NUP153P49790 1475 aaKnown RBP25.35■■□□□ 1.65
NCBP3-207ENST00000577169 ATP1B4Q9UN42 357 aaPredicted RBP25.35■■□□□ 1.65
NCBP3-207ENST00000577169 FMN1Q68DA7 1419 aa25.35■■□□□ 1.65
NCBP3-207ENST00000577169 CLIP1P30622 1438 aa25.34■■□□□ 1.65
NCBP3-207ENST00000577169 WDR7Q9Y4E6 1490 aa25.34■■□□□ 1.65
NCBP3-207ENST00000577169 EPRSP07814 1512 aaKnown RBP25.33■■□□□ 1.65
NCBP3-207ENST00000577169 GLI2P10070 1586 aa25.31■■□□□ 1.64
NCBP3-207ENST00000577169 TSPOAP1O95153 1857 aa25.28■■□□□ 1.64
NCBP3-207ENST00000577169 PLEKHD1A6NEE1 506 aa25.25■■□□□ 1.63
NCBP3-207ENST00000577169 CEP162Q5TB80 1403 aa25.22■■□□□ 1.63
NCBP3-207ENST00000577169 HECW1Q76N89 1606 aa25.19■■□□□ 1.62
NCBP3-207ENST00000577169 CDK13Q14004 1512 aaKnown RBP25.19■■□□□ 1.62
NCBP3-207ENST00000577169 MAP3K4Q9Y6R4 1608 aa25.18■■□□□ 1.62
NCBP3-207ENST00000577169 CD109Q6YHK3 1445 aa25.16■■□□□ 1.62
NCBP3-207ENST00000577169 CASKIN1Q8WXD9 1431 aa25.16■■□□□ 1.62
NCBP3-207ENST00000577169 PPRC1Q5VV67 1664 aaKnown RBP25.15■■□□□ 1.62
NCBP3-207ENST00000577169 CDK11AQ9UQ88 783 aaPredicted RBP25.12■■□□□ 1.61
NCBP3-207ENST00000577169 PCF11O94913 1555 aaKnown RBP25.12■■□□□ 1.61
NCBP3-207ENST00000577169 CFAP43Q8NDM7 1665 aa25.11■■□□□ 1.61
NCBP3-207ENST00000577169 LRRIQ1Q96JM4 1722 aa25.1■■□□□ 1.61
NCBP3-207ENST00000577169 ABCA9Q8IUA7 1624 aa25.07■■□□□ 1.6
NCBP3-207ENST00000577169 TEX14Q8IWB6 1497 aa25.07■■□□□ 1.6
NCBP3-207ENST00000577169 MAGI3Q5TCQ9 1506 aa25.07■■□□□ 1.6
NCBP3-207ENST00000577169 FYCO1Q9BQS8 1478 aa25.06■■□□□ 1.6
NCBP3-207ENST00000577169 KDM6BO15054 1643 aa25.03■■□□□ 1.6
NCBP3-207ENST00000577169 CCDC18Q5T9S5 1454 aa25.02■■□□□ 1.6
NCBP3-207ENST00000577169 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25■■□□□ 1.59
NCBP3-207ENST00000577169 TROQ12816 1431 aaPredicted RBP24.99■■□□□ 1.59
NCBP3-207ENST00000577169 COL17A1Q9UMD9 1497 aaPredicted RBP24.98■■□□□ 1.59
NCBP3-207ENST00000577169 TTC37Q6PGP7 1564 aa24.93■■□□□ 1.58
NCBP3-207ENST00000577169 KIF14Q15058 1648 aa24.91■■□□□ 1.58
NCBP3-207ENST00000577169 VPS8Q8N3P4 1428 aa24.91■■□□□ 1.58
NCBP3-207ENST00000577169 PHLDB1Q86UU1 1377 aa24.89■■□□□ 1.57
NCBP3-207ENST00000577169 PLCH2O75038 1416 aa24.87■■□□□ 1.57
NCBP3-207ENST00000577169 NEO1Q92859 1461 aa24.87■■□□□ 1.57
NCBP3-207ENST00000577169 ARAP3Q8WWN8 1544 aa24.85■■□□□ 1.57
NCBP3-207ENST00000577169 FANCAO15360 1455 aa24.83■■□□□ 1.57
NCBP3-207ENST00000577169 MTUS2Q5JR59 1369 aa24.83■■□□□ 1.57
NCBP3-207ENST00000577169 EFCAB2Q5VUJ9 269 aa24.83■■□□□ 1.57
NCBP3-207ENST00000577169 AKNAQ7Z591 1439 aa24.83■■□□□ 1.57
NCBP3-207ENST00000577169 RAPGEF3O95398 923 aa24.81■■□□□ 1.56
NCBP3-207ENST00000577169 MYO5CQ9NQX4 1742 aa24.81■■□□□ 1.56
NCBP3-207ENST00000577169 CFAP74Q9C0B2 1584 aa24.76■■□□□ 1.55
NCBP3-207ENST00000577169 ARHGAP5Q13017 1502 aa24.74■■□□□ 1.55
NCBP3-207ENST00000577169 TIAM1Q13009 1591 aa24.74■■□□□ 1.55
NCBP3-207ENST00000577169 CDC42BPBQ9Y5S2 1711 aa24.73■■□□□ 1.55
NCBP3-207ENST00000577169 DENND4BO75064 1496 aaPredicted RBP24.73■■□□□ 1.55
NCBP3-207ENST00000577169 EHBP1L1Q8N3D4 1523 aa24.71■■□□□ 1.55
NCBP3-207ENST00000577169 SCAPERQ9BY12 1400 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms