RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 NISCHQ9Y2I1 1504 aa37.96■■■■□ 3.67
NCBP3-207ENST00000577169 CCDC180Q9P1Z9 1646 aa33.65■■■□□ 2.98
NCBP3-207ENST00000577169 ABCC9O60706 1549 aa33.02■■■□□ 2.88
NCBP3-207ENST00000577169 DCAF8L2P0C7V8 631 aa31.87■■■□□ 2.69
NCBP3-207ENST00000577169 RB1CC1Q8TDY2 1594 aa31.71■■■□□ 2.67
NCBP3-207ENST00000577169 NACADO15069 1562 aa31.68■■■□□ 2.66
NCBP3-207ENST00000577169 ZCCHC6Q5VYS8 1495 aaKnown RBP31.58■■■□□ 2.65
NCBP3-207ENST00000577169 MYO15BQ96JP2 1530 aa31.46■■■□□ 2.63
NCBP3-207ENST00000577169 DCAF1Q9Y4B6 1507 aa31.35■■■□□ 2.61
NCBP3-207ENST00000577169 UNC13AQ9UPW8 1703 aa31■■■□□ 2.55
NCBP3-207ENST00000577169 PABPN1Q86U42 306 aaKnown RBP eCLIP30.93■■■□□ 2.54
NCBP3-207ENST00000577169 BICRAQ9NZM4 1560 aa30.77■■■□□ 2.52
NCBP3-207ENST00000577169 SCRIBQ14160 1630 aa30.76■■■□□ 2.52
NCBP3-207ENST00000577169 DNAJC5BQ9UF47 199 aa30.38■■■□□ 2.45
NCBP3-207ENST00000577169 SHROOM4Q9ULL8 1493 aa30.34■■■□□ 2.45
NCBP3-207ENST00000577169 EIF4G1Q04637 1599 aaKnown RBP29.94■■■□□ 2.38
NCBP3-207ENST00000577169 CC2D2AQ9P2K1 1620 aa29.83■■■□□ 2.37
NCBP3-207ENST00000577169 CECR2Q9BXF3 1484 aa29.64■■■□□ 2.34
NCBP3-207ENST00000577169 SMARCA4P51532 1647 aa29.42■■■□□ 2.3
NCBP3-207ENST00000577169 BAZ1AQ9NRL2 1556 aaPredicted RBP29.38■■■□□ 2.29
NCBP3-207ENST00000577169 ATAD2BQ9ULI0 1458 aa29.29■■■□□ 2.28
NCBP3-207ENST00000577169 MROH2BQ7Z745 1585 aa29.27■■■□□ 2.28
NCBP3-207ENST00000577169 NCAPD3P42695 1498 aa29.26■■■□□ 2.27
NCBP3-207ENST00000577169 SMARCA2P51531 1590 aa29.21■■■□□ 2.27
NCBP3-207ENST00000577169 PEG3Q9GZU2 1588 aa29.1■■■□□ 2.25
NCBP3-207ENST00000577169 HMGXB3Q12766 1538 aa29.05■■■□□ 2.24
NCBP3-207ENST00000577169 BAZ1BQ9UIG0 1483 aaKnown RBP29.03■■■□□ 2.24
NCBP3-207ENST00000577169 WIZO95785 1651 aa28.96■■■□□ 2.23
NCBP3-207ENST00000577169 RSF1Q96T23 1441 aaPredicted RBP28.95■■■□□ 2.23
NCBP3-207ENST00000577169 TOP2AP11388 1531 aaKnown RBP28.6■■■□□ 2.17
NCBP3-207ENST00000577169 NESP48681 1621 aa28.58■■■□□ 2.17
NCBP3-207ENST00000577169 LAMC3Q9Y6N6 1575 aa28.45■■■□□ 2.14
NCBP3-207ENST00000577169 CADPSQ9ULU8 1353 aa28.44■■■□□ 2.14
NCBP3-207ENST00000577169 ERCC6Q03468 1493 aa28.42■■■□□ 2.14
NCBP3-207ENST00000577169 SUPT5HO00267 1087 aaKnown RBP28.36■■■□□ 2.13
NCBP3-207ENST00000577169 CCDC88BA6NC98 1476 aa28.34■■■□□ 2.13
NCBP3-207ENST00000577169 PDS5BQ9NTI5 1447 aa28.29■■■□□ 2.12
NCBP3-207ENST00000577169 CFTRP13569 1480 aa28.24■■■□□ 2.11
NCBP3-207ENST00000577169 KIF21AQ7Z4S6 1674 aa28.19■■■□□ 2.1
NCBP3-207ENST00000577169 FANCD2Q9BXW9 1451 aa28.08■■■□□ 2.09
NCBP3-207ENST00000577169 CUX2O14529 1486 aa28.08■■■□□ 2.09
NCBP3-207ENST00000577169 THOC2Q8NI27 1593 aaKnown RBP28.06■■■□□ 2.08
NCBP3-207ENST00000577169 CEP164Q9UPV0 1460 aa28.02■■■□□ 2.08
NCBP3-207ENST00000577169 MRC2Q9UBG0 1479 aa27.98■■■□□ 2.07
NCBP3-207ENST00000577169 PRDM2Q13029 1718 aa27.97■■■□□ 2.07
NCBP3-207ENST00000577169 WDR62O43379 1518 aa27.86■■■□□ 2.05
NCBP3-207ENST00000577169 URB2Q14146 1524 aaKnown RBP27.81■■■□□ 2.04
NCBP3-207ENST00000577169 TOPBP1Q92547 1522 aa27.64■■■□□ 2.02
NCBP3-207ENST00000577169 ABCC8Q09428 1581 aa27.63■■■□□ 2.01
NCBP3-207ENST00000577169 DNMBPQ6XZF7 1577 aa27.57■■■□□ 2
NCBP3-207ENST00000577169 CUX1P39880 1505 aa27.44■■□□□ 1.98
NCBP3-207ENST00000577169 IFT140Q96RY7 1462 aa27.44■■□□□ 1.98
NCBP3-207ENST00000577169 POLA1P09884 1462 aaPredicted RBP27.39■■□□□ 1.98
NCBP3-207ENST00000577169 SOGA1O94964 1423 aa27.35■■□□□ 1.97
NCBP3-207ENST00000577169 ZNF608Q9ULD9 1512 aaPredicted RBP27.35■■□□□ 1.97
NCBP3-207ENST00000577169 FGD5Q6ZNL6 1462 aa27.34■■□□□ 1.97
NCBP3-207ENST00000577169 RAD54L2Q9Y4B4 1467 aa27.33■■□□□ 1.97
NCBP3-207ENST00000577169 TARBP1Q13395 1621 aaKnown RBP27.31■■□□□ 1.96
NCBP3-207ENST00000577169 DNAJC5Q9H3Z4 198 aa27.3■■□□□ 1.96
NCBP3-207ENST00000577169 WRNQ14191 1432 aaPredicted RBP eCLIP27.28■■□□□ 1.96
NCBP3-207ENST00000577169 AQRO60306 1485 aaKnown RBP eCLIP27.24■■□□□ 1.95
NCBP3-207ENST00000577169 TDRD9Q8NDG6 1382 aaKnown RBP27.21■■□□□ 1.95
NCBP3-207ENST00000577169 SYNJ1O43426 1573 aa27.19■■□□□ 1.94
NCBP3-207ENST00000577169 TOP2BQ02880 1626 aa27.19■■□□□ 1.94
NCBP3-207ENST00000577169 BIVM-ERCC5R4GMW8 1640 aa27.18■■□□□ 1.94
NCBP3-207ENST00000577169 EIF4G3O43432 1585 aaKnown RBP27.18■■□□□ 1.94
NCBP3-207ENST00000577169 ABCA10Q8WWZ4 1543 aa27.06■■□□□ 1.92
NCBP3-207ENST00000577169 WDR97A6NE52 1622 aa27.05■■□□□ 1.92
NCBP3-207ENST00000577169 OSCARQ8IYS5 282 aa27.04■■□□□ 1.92
NCBP3-207ENST00000577169 GAPVD1Q14C86 1478 aa26.99■■□□□ 1.91
NCBP3-207ENST00000577169 GRIN2BQ13224 1484 aa26.97■■□□□ 1.91
NCBP3-207ENST00000577169 FBLN2P98095 1184 aa26.95■■□□□ 1.9
NCBP3-207ENST00000577169 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
NCBP3-207ENST00000577169 ABCA5Q8WWZ7 1642 aa26.92■■□□□ 1.9
NCBP3-207ENST00000577169 PBRM1Q86U86 1689 aa26.89■■□□□ 1.89
NCBP3-207ENST00000577169 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
NCBP3-207ENST00000577169 CHD1O14646 1710 aa26.86■■□□□ 1.89
NCBP3-207ENST00000577169 CHMP7Q8WUX9 453 aaPredicted RBP26.86■■□□□ 1.89
NCBP3-207ENST00000577169 SYNJ2O15056 1496 aa26.78■■□□□ 1.88
NCBP3-207ENST00000577169 TRIM41Q8WV44 630 aa26.75■■□□□ 1.87
NCBP3-207ENST00000577169 ERICH3Q5RHP9 1530 aa26.73■■□□□ 1.87
NCBP3-207ENST00000577169 KIF27Q86VH2 1401 aa26.71■■□□□ 1.87
NCBP3-207ENST00000577169 FHAD1B1AJZ9 1412 aa26.67■■□□□ 1.86
NCBP3-207ENST00000577169 IGF1RP08069 1367 aa26.66■■□□□ 1.86
NCBP3-207ENST00000577169 ADAMTS12P58397 1594 aa26.66■■□□□ 1.86
NCBP3-207ENST00000577169 GRIN2AQ12879 1464 aa26.62■■□□□ 1.85
NCBP3-207ENST00000577169 CLASP1Q7Z460 1538 aa26.55■■□□□ 1.84
NCBP3-207ENST00000577169 RUSC2Q8N2Y8 1516 aa26.55■■□□□ 1.84
NCBP3-207ENST00000577169 RIMBP3CA6NJZ7 1639 aa26.51■■□□□ 1.83
NCBP3-207ENST00000577169 RIMBP3BA6NNM3 1639 aa26.51■■□□□ 1.83
NCBP3-207ENST00000577169 RIMBP3Q9UFD9 1639 aa26.51■■□□□ 1.83
NCBP3-207ENST00000577169 ARHGEF11O15085 1522 aa26.5■■□□□ 1.83
NCBP3-207ENST00000577169 NUP160Q12769 1436 aa26.49■■□□□ 1.83
NCBP3-207ENST00000577169 CARMIL1Q5VZK9 1371 aa26.49■■□□□ 1.83
NCBP3-207ENST00000577169 CEP170Q5SW79 1584 aa26.48■■□□□ 1.83
NCBP3-207ENST00000577169 CHIC1Q5VXU3 224 aa26.47■■□□□ 1.83
NCBP3-207ENST00000577169 CUL7Q14999 1698 aa26.47■■□□□ 1.83
NCBP3-207ENST00000577169 CYB5RLQ6IPT4 315 aa26.38■■□□□ 1.81
NCBP3-207ENST00000577169 JPH4Q96JJ6 628 aa26.33■■□□□ 1.81
NCBP3-207ENST00000577169 ARAP1Q96P48 1450 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms