RNA–Protein interactions for RNA: ENST00000576668.1

ABR-234, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-234ENST00000576668 CTTNBP2Q8WZ74 1663 aa27.37■■□□□ 1.97
ABR-234ENST00000576668 CHMP7Q8WUX9 453 aaPredicted RBP27.35■■□□□ 1.97
ABR-234ENST00000576668 CEP162Q5TB80 1403 aa27.3■■□□□ 1.96
ABR-234ENST00000576668 RIMBP3CA6NJZ7 1639 aa27.28■■□□□ 1.96
ABR-234ENST00000576668 RIMBP3BA6NNM3 1639 aa27.28■■□□□ 1.96
ABR-234ENST00000576668 RIMBP3Q9UFD9 1639 aa27.28■■□□□ 1.96
ABR-234ENST00000576668 CEP170Q5SW79 1584 aa27.26■■□□□ 1.95
ABR-234ENST00000576668 ARHGEF11O15085 1522 aa27.24■■□□□ 1.95
ABR-234ENST00000576668 NUP160Q12769 1436 aa27.22■■□□□ 1.95
ABR-234ENST00000576668 CLIP1P30622 1438 aa27.18■■□□□ 1.94
ABR-234ENST00000576668 CLASP1Q7Z460 1538 aa27.18■■□□□ 1.94
ABR-234ENST00000576668 IQGAP2Q13576 1575 aa27.18■■□□□ 1.94
ABR-234ENST00000576668 KIAA0586Q9BVV6 1533 aa27.14■■□□□ 1.94
ABR-234ENST00000576668 ARHGAP35Q9NRY4 1499 aa27.09■■□□□ 1.93
ABR-234ENST00000576668 EFCAB5A4FU69 1503 aa27.07■■□□□ 1.92
ABR-234ENST00000576668 SAMD9Q5K651 1589 aa27.07■■□□□ 1.92
ABR-234ENST00000576668 RANGAP1P46060 587 aaPredicted RBP27.06■■□□□ 1.92
ABR-234ENST00000576668 ARAP1Q96P48 1450 aa27.05■■□□□ 1.92
ABR-234ENST00000576668 UGGT2Q9NYU1 1516 aa27.05■■□□□ 1.92
ABR-234ENST00000576668 CYB5RLQ6IPT4 315 aa27.03■■□□□ 1.92
ABR-234ENST00000576668 SHROOM2Q13796 1616 aa26.95■■□□□ 1.91
ABR-234ENST00000576668 KIAA0556O60303 1618 aa26.94■■□□□ 1.9
ABR-234ENST00000576668 DISP1Q96F81 1524 aa26.92■■□□□ 1.9
ABR-234ENST00000576668 FHOD3Q2V2M9 1422 aa26.91■■□□□ 1.9
ABR-234ENST00000576668 VPS8Q8N3P4 1428 aa26.9■■□□□ 1.9
ABR-234ENST00000576668 JPH4Q96JJ6 628 aa26.84■■□□□ 1.89
ABR-234ENST00000576668 P3H3Q8IVL6 736 aa26.83■■□□□ 1.89
ABR-234ENST00000576668 ERCC6L2Q5T890 1561 aa26.8■■□□□ 1.88
ABR-234ENST00000576668 PRG4Q92954 1404 aaPredicted RBP26.78■■□□□ 1.88
ABR-234ENST00000576668 PCF11O94913 1555 aaKnown RBP26.78■■□□□ 1.88
ABR-234ENST00000576668 CARMIL2Q6F5E8 1435 aa26.77■■□□□ 1.88
ABR-234ENST00000576668 FMN1Q68DA7 1419 aa26.74■■□□□ 1.87
ABR-234ENST00000576668 FYCO1Q9BQS8 1478 aa26.68■■□□□ 1.86
ABR-234ENST00000576668 CASKIN1Q8WXD9 1431 aa26.67■■□□□ 1.86
ABR-234ENST00000576668 LRRIQ1Q96JM4 1722 aa26.6■■□□□ 1.85
ABR-234ENST00000576668 HECW1Q76N89 1606 aa26.6■■□□□ 1.85
ABR-234ENST00000576668 RAPGEF6Q8TEU7 1601 aa26.6■■□□□ 1.85
ABR-234ENST00000576668 CFAP43Q8NDM7 1665 aa26.6■■□□□ 1.85
ABR-234ENST00000576668 ABCA8O94911 1581 aa26.57■■□□□ 1.84
ABR-234ENST00000576668 PLB1Q6P1J6 1458 aa26.55■■□□□ 1.84
ABR-234ENST00000576668 TRHP20396 242 aaPredicted RBP26.55■■□□□ 1.84
ABR-234ENST00000576668 TIAM1Q13009 1591 aa26.54■■□□□ 1.84
ABR-234ENST00000576668 PTPRGP23470 1445 aa26.54■■□□□ 1.84
ABR-234ENST00000576668 MAP3K1Q13233 1512 aa26.54■■□□□ 1.84
ABR-234ENST00000576668 TTBK1Q5TCY1 1321 aaPredicted RBP26.53■■□□□ 1.84
ABR-234ENST00000576668 NUP153P49790 1475 aaKnown RBP26.51■■□□□ 1.83
ABR-234ENST00000576668 CCDC18Q5T9S5 1454 aa26.47■■□□□ 1.83
ABR-234ENST00000576668 EPRSP07814 1512 aaKnown RBP26.46■■□□□ 1.83
ABR-234ENST00000576668 APLP2Q06481 763 aa26.43■■□□□ 1.82
ABR-234ENST00000576668 ATP1B4Q9UN42 357 aaPredicted RBP26.43■■□□□ 1.82
ABR-234ENST00000576668 CDK13Q14004 1512 aaKnown RBP26.43■■□□□ 1.82
ABR-234ENST00000576668 UACAQ9BZF9 1416 aa26.42■■□□□ 1.82
ABR-234ENST00000576668 ABCC2Q92887 1545 aa26.42■■□□□ 1.82
ABR-234ENST00000576668 PPARGC1BQ86YN6 1023 aaKnown RBP26.4■■□□□ 1.82
ABR-234ENST00000576668 LRRC9Q6ZRR7 1453 aa26.38■■□□□ 1.81
ABR-234ENST00000576668 UHRF1BP1LA0JNW5 1464 aa26.37■■□□□ 1.81
ABR-234ENST00000576668 KANK4Q5T7N3 995 aaPredicted RBP26.36■■□□□ 1.81
ABR-234ENST00000576668 MAGI3Q5TCQ9 1506 aa26.35■■□□□ 1.81
ABR-234ENST00000576668 ADCY10Q96PN6 1610 aa26.34■■□□□ 1.81
ABR-234ENST00000576668 EHBP1L1Q8N3D4 1523 aa26.32■■□□□ 1.8
ABR-234ENST00000576668 ARID3CA6NKF2 412 aa26.31■■□□□ 1.8
ABR-234ENST00000576668 ATP10BO94823 1461 aa26.3■■□□□ 1.8
ABR-234ENST00000576668 NPM1P06748 294 aaKnown RBP eCLIP26.3■■□□□ 1.8
ABR-234ENST00000576668 ZCCHC11Q5TAX3 1644 aaKnown RBP26.25■■□□□ 1.79
ABR-234ENST00000576668 KDM5BQ9UGL1 1544 aa26.25■■□□□ 1.79
ABR-234ENST00000576668 MTUS2Q5JR59 1369 aa26.23■■□□□ 1.79
ABR-234ENST00000576668 MAPKBP1O60336 1514 aa26.2■■□□□ 1.79
ABR-234ENST00000576668 SUPT6HQ7KZ85 1726 aaKnown RBP26.2■■□□□ 1.79
ABR-234ENST00000576668 KIF13AQ9H1H9 1805 aa26.19■■□□□ 1.78
ABR-234ENST00000576668 TROQ12816 1431 aaPredicted RBP26.18■■□□□ 1.78
ABR-234ENST00000576668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.16■■□□□ 1.78
ABR-234ENST00000576668 HNRNPUL2Q1KMD3 747 aaKnown RBP26.16■■□□□ 1.78
ABR-234ENST00000576668 NCOA2Q15596 1464 aa26.15■■□□□ 1.78
ABR-234ENST00000576668 KIF14Q15058 1648 aa26.14■■□□□ 1.77
ABR-234ENST00000576668 ABCC10Q5T3U5 1492 aa26.12■■□□□ 1.77
ABR-234ENST00000576668 CDK11AQ9UQ88 783 aaPredicted RBP26.11■■□□□ 1.77
ABR-234ENST00000576668 PHLDB1Q86UU1 1377 aa26.1■■□□□ 1.77
ABR-234ENST00000576668 FAM69CQ0P6D2 419 aa26.08■■□□□ 1.77
ABR-234ENST00000576668 DIP2BQ9P265 1576 aa26.07■■□□□ 1.76
ABR-234ENST00000576668 TRIM26Q12899 539 aaPredicted RBP26.06■■□□□ 1.76
ABR-234ENST00000576668 PLEKHD1A6NEE1 506 aa26.04■■□□□ 1.76
ABR-234ENST00000576668 RRBP1Q9P2E9 1410 aaKnown RBP26.04■■□□□ 1.76
ABR-234ENST00000576668 ASXL2Q76L83 1435 aa26.01■■□□□ 1.75
ABR-234ENST00000576668 WDR7Q9Y4E6 1490 aa26■■□□□ 1.75
ABR-234ENST00000576668 MYOM3Q5VTT5 1437 aa26■■□□□ 1.75
ABR-234ENST00000576668 TTC37Q6PGP7 1564 aa25.97■■□□□ 1.75
ABR-234ENST00000576668 ITSN2Q9NZM3 1697 aa25.96■■□□□ 1.75
ABR-234ENST00000576668 FGD6Q6ZV73 1430 aa25.96■■□□□ 1.75
ABR-234ENST00000576668 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.95■■□□□ 1.74
ABR-234ENST00000576668 CDC42BPAQ5VT25 1732 aa25.94■■□□□ 1.74
ABR-234ENST00000576668 CCNB3Q8WWL7 1395 aa25.93■■□□□ 1.74
ABR-234ENST00000576668 TSPOAP1O95153 1857 aa25.92■■□□□ 1.74
ABR-234ENST00000576668 GPATCH8Q9UKJ3 1502 aaKnown RBP25.91■■□□□ 1.74
ABR-234ENST00000576668 PCGF6Q9BYE7 350 aa25.9■■□□□ 1.74
ABR-234ENST00000576668 PREX2Q70Z35 1606 aa25.89■■□□□ 1.74
ABR-234ENST00000576668 PTPN23Q9H3S7 1636 aa25.89■■□□□ 1.74
ABR-234ENST00000576668 GLI2P10070 1586 aa25.89■■□□□ 1.73
ABR-234ENST00000576668 MIA2Q96PC5 1412 aa25.88■■□□□ 1.73
ABR-234ENST00000576668 MYO5CQ9NQX4 1742 aa25.87■■□□□ 1.73
ABR-234ENST00000576668 ABCA9Q8IUA7 1624 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms