RNA–Protein interactions for RNA: ENST00000576668.1

ABR-234, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-234ENST00000576668 NISCHQ9Y2I1 1504 aa39.58■■■■□ 3.93
ABR-234ENST00000576668 CCDC180Q9P1Z9 1646 aa34.82■■■■□ 3.16
ABR-234ENST00000576668 ABCC9O60706 1549 aa33.81■■■■□ 3
ABR-234ENST00000576668 ZCCHC6Q5VYS8 1495 aaKnown RBP33.21■■■□□ 2.91
ABR-234ENST00000576668 DCAF1Q9Y4B6 1507 aa32.78■■■□□ 2.84
ABR-234ENST00000576668 MYO15BQ96JP2 1530 aa32.56■■■□□ 2.8
ABR-234ENST00000576668 DCAF8L2P0C7V8 631 aa32.55■■■□□ 2.8
ABR-234ENST00000576668 NACADO15069 1562 aa32.46■■■□□ 2.79
ABR-234ENST00000576668 RB1CC1Q8TDY2 1594 aa32.43■■■□□ 2.78
ABR-234ENST00000576668 SCRIBQ14160 1630 aa31.87■■■□□ 2.69
ABR-234ENST00000576668 SHROOM4Q9ULL8 1493 aa31.84■■■□□ 2.69
ABR-234ENST00000576668 UNC13AQ9UPW8 1703 aa31.75■■■□□ 2.67
ABR-234ENST00000576668 PABPN1Q86U42 306 aaKnown RBP eCLIP31.56■■■□□ 2.64
ABR-234ENST00000576668 BICRAQ9NZM4 1560 aa31.47■■■□□ 2.63
ABR-234ENST00000576668 DNAJC5BQ9UF47 199 aa31.26■■■□□ 2.59
ABR-234ENST00000576668 CECR2Q9BXF3 1484 aa30.76■■■□□ 2.52
ABR-234ENST00000576668 EIF4G1Q04637 1599 aaKnown RBP30.64■■■□□ 2.5
ABR-234ENST00000576668 BAZ1AQ9NRL2 1556 aaPredicted RBP30.61■■■□□ 2.49
ABR-234ENST00000576668 CC2D2AQ9P2K1 1620 aa30.58■■■□□ 2.49
ABR-234ENST00000576668 SMARCA4P51532 1647 aa30.56■■■□□ 2.48
ABR-234ENST00000576668 MROH2BQ7Z745 1585 aa30.55■■■□□ 2.48
ABR-234ENST00000576668 RSF1Q96T23 1441 aaPredicted RBP30.49■■■□□ 2.47
ABR-234ENST00000576668 SUPT5HO00267 1087 aaKnown RBP30.33■■■□□ 2.45
ABR-234ENST00000576668 WIZO95785 1651 aa30.29■■■□□ 2.44
ABR-234ENST00000576668 PEG3Q9GZU2 1588 aa30.23■■■□□ 2.43
ABR-234ENST00000576668 ATAD2BQ9ULI0 1458 aa30.12■■■□□ 2.41
ABR-234ENST00000576668 SMARCA2P51531 1590 aa30.1■■■□□ 2.41
ABR-234ENST00000576668 TOP2AP11388 1531 aaKnown RBP30■■■□□ 2.39
ABR-234ENST00000576668 NCAPD3P42695 1498 aa29.93■■■□□ 2.38
ABR-234ENST00000576668 HMGXB3Q12766 1538 aa29.92■■■□□ 2.38
ABR-234ENST00000576668 BAZ1BQ9UIG0 1483 aaKnown RBP29.91■■■□□ 2.38
ABR-234ENST00000576668 CCDC88BA6NC98 1476 aa29.61■■■□□ 2.33
ABR-234ENST00000576668 NESP48681 1621 aa29.2■■■□□ 2.26
ABR-234ENST00000576668 CFTRP13569 1480 aa29.15■■■□□ 2.26
ABR-234ENST00000576668 ERCC6Q03468 1493 aa29.15■■■□□ 2.26
ABR-234ENST00000576668 CADPSQ9ULU8 1353 aa29.09■■■□□ 2.25
ABR-234ENST00000576668 LAMC3Q9Y6N6 1575 aa29.09■■■□□ 2.25
ABR-234ENST00000576668 PRDM2Q13029 1718 aa29.08■■■□□ 2.25
ABR-234ENST00000576668 CUX2O14529 1486 aa28.92■■■□□ 2.22
ABR-234ENST00000576668 PDS5BQ9NTI5 1447 aa28.9■■■□□ 2.22
ABR-234ENST00000576668 CHIC1Q5VXU3 224 aa28.87■■■□□ 2.21
ABR-234ENST00000576668 ABCC8Q09428 1581 aa28.87■■■□□ 2.21
ABR-234ENST00000576668 KIF21AQ7Z4S6 1674 aa28.86■■■□□ 2.21
ABR-234ENST00000576668 THOC2Q8NI27 1593 aaKnown RBP28.79■■■□□ 2.2
ABR-234ENST00000576668 FANCD2Q9BXW9 1451 aa28.79■■■□□ 2.2
ABR-234ENST00000576668 WRNQ14191 1432 aaPredicted RBP eCLIP28.71■■■□□ 2.19
ABR-234ENST00000576668 SYNJ1O43426 1573 aa28.69■■■□□ 2.18
ABR-234ENST00000576668 CEP164Q9UPV0 1460 aa28.67■■■□□ 2.18
ABR-234ENST00000576668 CUX1P39880 1505 aa28.62■■■□□ 2.17
ABR-234ENST00000576668 BIVM-ERCC5R4GMW8 1640 aa28.61■■■□□ 2.17
ABR-234ENST00000576668 MRC2Q9UBG0 1479 aa28.6■■■□□ 2.17
ABR-234ENST00000576668 TOP2BQ02880 1626 aa28.59■■■□□ 2.17
ABR-234ENST00000576668 TRIM41Q8WV44 630 aa28.57■■■□□ 2.16
ABR-234ENST00000576668 DNMBPQ6XZF7 1577 aa28.52■■■□□ 2.16
ABR-234ENST00000576668 WDR62O43379 1518 aa28.52■■■□□ 2.16
ABR-234ENST00000576668 URB2Q14146 1524 aaKnown RBP28.49■■■□□ 2.15
ABR-234ENST00000576668 TOPBP1Q92547 1522 aa28.46■■■□□ 2.15
ABR-234ENST00000576668 FGD5Q6ZNL6 1462 aa28.35■■■□□ 2.13
ABR-234ENST00000576668 DNAJC5Q9H3Z4 198 aa28.32■■■□□ 2.12
ABR-234ENST00000576668 POLA1P09884 1462 aaPredicted RBP28.28■■■□□ 2.12
ABR-234ENST00000576668 SOGA1O94964 1423 aa28.18■■■□□ 2.1
ABR-234ENST00000576668 WDR97A6NE52 1622 aa28.16■■■□□ 2.1
ABR-234ENST00000576668 RAD54L2Q9Y4B4 1467 aa28.15■■■□□ 2.1
ABR-234ENST00000576668 RUSC2Q8N2Y8 1516 aa28.13■■■□□ 2.09
ABR-234ENST00000576668 TARBP1Q13395 1621 aaKnown RBP28.11■■■□□ 2.09
ABR-234ENST00000576668 ABCA10Q8WWZ4 1543 aa28.11■■■□□ 2.09
ABR-234ENST00000576668 EEA1Q15075 1411 aa28.07■■■□□ 2.08
ABR-234ENST00000576668 IFT140Q96RY7 1462 aa28.02■■■□□ 2.08
ABR-234ENST00000576668 FAM9AQ8IZU1 332 aaPredicted RBP28.01■■■□□ 2.07
ABR-234ENST00000576668 KIF27Q86VH2 1401 aa28.01■■■□□ 2.07
ABR-234ENST00000576668 ABCA5Q8WWZ7 1642 aa27.98■■■□□ 2.07
ABR-234ENST00000576668 ZNF608Q9ULD9 1512 aaPredicted RBP27.92■■■□□ 2.06
ABR-234ENST00000576668 TDRD9Q8NDG6 1382 aaKnown RBP27.86■■■□□ 2.05
ABR-234ENST00000576668 CSRNP3Q8WYN3 585 aa27.85■■■□□ 2.05
ABR-234ENST00000576668 EIF4G3O43432 1585 aaKnown RBP27.84■■■□□ 2.05
ABR-234ENST00000576668 GAPVD1Q14C86 1478 aa27.83■■■□□ 2.05
ABR-234ENST00000576668 PBRM1Q86U86 1689 aa27.81■■■□□ 2.04
ABR-234ENST00000576668 KIF21BO75037 1637 aa27.81■■■□□ 2.04
ABR-234ENST00000576668 AQRO60306 1485 aaKnown RBP eCLIP27.78■■■□□ 2.04
ABR-234ENST00000576668 IGF1RP08069 1367 aa27.78■■■□□ 2.04
ABR-234ENST00000576668 ERICH3Q5RHP9 1530 aa27.77■■■□□ 2.04
ABR-234ENST00000576668 PRXQ9BXM0 1461 aa27.76■■■□□ 2.03
ABR-234ENST00000576668 CUL7Q14999 1698 aa27.73■■■□□ 2.03
ABR-234ENST00000576668 OSCARQ8IYS5 282 aa27.71■■■□□ 2.03
ABR-234ENST00000576668 GRIN2BQ13224 1484 aa27.7■■■□□ 2.02
ABR-234ENST00000576668 LOC105371045A0A1W2PR82 267 aa27.68■■■□□ 2.02
ABR-234ENST00000576668 GOLGA3Q08378 1498 aa27.68■■■□□ 2.02
ABR-234ENST00000576668 RAPGEF2Q9Y4G8 1499 aa27.66■■■□□ 2.02
ABR-234ENST00000576668 ADAMTS12P58397 1594 aa27.65■■■□□ 2.02
ABR-234ENST00000576668 CARMIL1Q5VZK9 1371 aa27.62■■■□□ 2.01
ABR-234ENST00000576668 EHMT2Q96KQ7 1210 aa27.59■■■□□ 2.01
ABR-234ENST00000576668 SNAPC4Q5SXM2 1469 aa27.58■■■□□ 2.01
ABR-234ENST00000576668 MAGI1Q96QZ7 1491 aaPredicted RBP27.54■■■□□ 2
ABR-234ENST00000576668 FHAD1B1AJZ9 1412 aa27.53■■■□□ 2
ABR-234ENST00000576668 CHD1O14646 1710 aa27.52■■■□□ 2
ABR-234ENST00000576668 FBLN2P98095 1184 aa27.46■■□□□ 1.99
ABR-234ENST00000576668 TNIKQ9UKE5 1360 aa27.46■■□□□ 1.99
ABR-234ENST00000576668 SYNJ2O15056 1496 aa27.42■■□□□ 1.98
ABR-234ENST00000576668 UBTFP17480 764 aaKnown RBP27.4■■□□□ 1.98
ABR-234ENST00000576668 GRIN2AQ12879 1464 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms