RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 KIAA0586Q9BVV6 1533 aa23.46■■□□□ 1.35
NDE1-211ENST00000576502 PRG4Q92954 1404 aaPredicted RBP23.45■■□□□ 1.34
NDE1-211ENST00000576502 ERCC6L2Q5T890 1561 aa23.44■■□□□ 1.34
NDE1-211ENST00000576502 RAPGEF2Q9Y4G8 1499 aa23.37■■□□□ 1.33
NDE1-211ENST00000576502 TRHP20396 242 aaPredicted RBP23.37■■□□□ 1.33
NDE1-211ENST00000576502 IQGAP2Q13576 1575 aa23.31■■□□□ 1.32
NDE1-211ENST00000576502 CARMIL2Q6F5E8 1435 aa23.28■■□□□ 1.32
NDE1-211ENST00000576502 EEA1Q15075 1411 aa23.21■■□□□ 1.31
NDE1-211ENST00000576502 NPM1P06748 294 aaKnown RBP eCLIP23.2■■□□□ 1.3
NDE1-211ENST00000576502 PRXQ9BXM0 1461 aa23.18■■□□□ 1.3
NDE1-211ENST00000576502 CTTNBP2Q8WZ74 1663 aa23.18■■□□□ 1.3
NDE1-211ENST00000576502 TNIKQ9UKE5 1360 aa23.17■■□□□ 1.3
NDE1-211ENST00000576502 PTPRGP23470 1445 aa23.16■■□□□ 1.3
NDE1-211ENST00000576502 UGGT2Q9NYU1 1516 aa23.15■■□□□ 1.3
NDE1-211ENST00000576502 CSRNP3Q8WYN3 585 aa23.14■■□□□ 1.29
NDE1-211ENST00000576502 ADCY10Q96PN6 1610 aa23.1■■□□□ 1.29
NDE1-211ENST00000576502 GOLGA3Q08378 1498 aa23.09■■□□□ 1.29
NDE1-211ENST00000576502 DISP1Q96F81 1524 aa23.08■■□□□ 1.29
NDE1-211ENST00000576502 KIAA0556O60303 1618 aa23.07■■□□□ 1.28
NDE1-211ENST00000576502 TTBK1Q5TCY1 1321 aaPredicted RBP23.07■■□□□ 1.28
NDE1-211ENST00000576502 MAPKBP1O60336 1514 aa23.05■■□□□ 1.28
NDE1-211ENST00000576502 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
NDE1-211ENST00000576502 FAM9AQ8IZU1 332 aaPredicted RBP23.02■■□□□ 1.28
NDE1-211ENST00000576502 UACAQ9BZF9 1416 aa23■■□□□ 1.27
NDE1-211ENST00000576502 UHRF1BP1LA0JNW5 1464 aa23■■□□□ 1.27
NDE1-211ENST00000576502 ABCC2Q92887 1545 aa22.98■■□□□ 1.27
NDE1-211ENST00000576502 KIF13AQ9H1H9 1805 aa22.96■■□□□ 1.27
NDE1-211ENST00000576502 ABCC10Q5T3U5 1492 aa22.96■■□□□ 1.27
NDE1-211ENST00000576502 KIF21BO75037 1637 aa22.93■■□□□ 1.26
NDE1-211ENST00000576502 FAM69CQ0P6D2 419 aa22.92■■□□□ 1.26
NDE1-211ENST00000576502 DIP2BQ9P265 1576 aa22.9■■□□□ 1.26
NDE1-211ENST00000576502 PLB1Q6P1J6 1458 aa22.89■■□□□ 1.25
NDE1-211ENST00000576502 KDM5BQ9UGL1 1544 aa22.87■■□□□ 1.25
NDE1-211ENST00000576502 ASXL2Q76L83 1435 aa22.84■■□□□ 1.25
NDE1-211ENST00000576502 SAMD9Q5K651 1589 aa22.82■■□□□ 1.24
NDE1-211ENST00000576502 ZCCHC11Q5TAX3 1644 aaKnown RBP22.82■■□□□ 1.24
NDE1-211ENST00000576502 ABCA8O94911 1581 aa22.8■■□□□ 1.24
NDE1-211ENST00000576502 P3H3Q8IVL6 736 aa22.77■■□□□ 1.24
NDE1-211ENST00000576502 GLI2P10070 1586 aa22.76■■□□□ 1.23
NDE1-211ENST00000576502 UBTFP17480 764 aaKnown RBP22.76■■□□□ 1.23
NDE1-211ENST00000576502 EFCAB5A4FU69 1503 aa22.76■■□□□ 1.23
NDE1-211ENST00000576502 TSPOAP1O95153 1857 aa22.74■■□□□ 1.23
NDE1-211ENST00000576502 RANGAP1P46060 587 aaPredicted RBP22.73■■□□□ 1.23
NDE1-211ENST00000576502 WDR7Q9Y4E6 1490 aa22.72■■□□□ 1.23
NDE1-211ENST00000576502 EPRSP07814 1512 aaKnown RBP22.71■■□□□ 1.23
NDE1-211ENST00000576502 RAPGEF6Q8TEU7 1601 aa22.68■■□□□ 1.22
NDE1-211ENST00000576502 FHOD3Q2V2M9 1422 aa22.65■■□□□ 1.22
NDE1-211ENST00000576502 EHMT2Q96KQ7 1210 aa22.65■■□□□ 1.22
NDE1-211ENST00000576502 KDM6BO15054 1643 aa22.64■■□□□ 1.21
NDE1-211ENST00000576502 TEX14Q8IWB6 1497 aa22.63■■□□□ 1.21
NDE1-211ENST00000576502 MAP3K4Q9Y6R4 1608 aa22.63■■□□□ 1.21
NDE1-211ENST00000576502 ATP10BO94823 1461 aa22.6■■□□□ 1.21
NDE1-211ENST00000576502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.59■■□□□ 1.21
NDE1-211ENST00000576502 HNRNPUL2Q1KMD3 747 aaKnown RBP22.59■■□□□ 1.21
NDE1-211ENST00000576502 CFAP43Q8NDM7 1665 aa22.58■■□□□ 1.21
NDE1-211ENST00000576502 KCNH8Q96L42 1107 aa22.58■■□□□ 1.21
NDE1-211ENST00000576502 ARID3CA6NKF2 412 aa22.57■■□□□ 1.2
NDE1-211ENST00000576502 PPRC1Q5VV67 1664 aaKnown RBP22.57■■□□□ 1.2
NDE1-211ENST00000576502 FMN1Q68DA7 1419 aa22.56■■□□□ 1.2
NDE1-211ENST00000576502 NUP153P49790 1475 aaKnown RBP22.54■■□□□ 1.2
NDE1-211ENST00000576502 CD109Q6YHK3 1445 aa22.53■■□□□ 1.2
NDE1-211ENST00000576502 ARHGAP35Q9NRY4 1499 aa22.5■■□□□ 1.19
NDE1-211ENST00000576502 MAGI3Q5TCQ9 1506 aa22.5■■□□□ 1.19
NDE1-211ENST00000576502 PLEKHD1A6NEE1 506 aa22.48■■□□□ 1.19
NDE1-211ENST00000576502 HECW1Q76N89 1606 aa22.46■■□□□ 1.19
NDE1-211ENST00000576502 ABCA9Q8IUA7 1624 aa22.45■■□□□ 1.18
NDE1-211ENST00000576502 ATP1B4Q9UN42 357 aaPredicted RBP22.42■■□□□ 1.18
NDE1-211ENST00000576502 AEBP2Q6ZN18 517 aaPredicted RBP22.41■■□□□ 1.18
NDE1-211ENST00000576502 CDK11AQ9UQ88 783 aaPredicted RBP22.4■■□□□ 1.18
NDE1-211ENST00000576502 PHLDB1Q86UU1 1377 aa22.39■■□□□ 1.18
NDE1-211ENST00000576502 CDK13Q14004 1512 aaKnown RBP22.36■■□□□ 1.17
NDE1-211ENST00000576502 CLIP1P30622 1438 aa22.35■■□□□ 1.17
NDE1-211ENST00000576502 COL17A1Q9UMD9 1497 aaPredicted RBP22.34■■□□□ 1.17
NDE1-211ENST00000576502 NEO1Q92859 1461 aa22.33■■□□□ 1.16
NDE1-211ENST00000576502 ARAP3Q8WWN8 1544 aa22.31■■□□□ 1.16
NDE1-211ENST00000576502 CASKIN1Q8WXD9 1431 aa22.3■■□□□ 1.16
NDE1-211ENST00000576502 CFAP74Q9C0B2 1584 aa22.29■■□□□ 1.16
NDE1-211ENST00000576502 CCDC18Q5T9S5 1454 aa22.29■■□□□ 1.16
NDE1-211ENST00000576502 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.27■■□□□ 1.16
NDE1-211ENST00000576502 PCF11O94913 1555 aaKnown RBP22.26■■□□□ 1.15
NDE1-211ENST00000576502 FYCO1Q9BQS8 1478 aa22.26■■□□□ 1.15
NDE1-211ENST00000576502 KIF14Q15058 1648 aa22.24■■□□□ 1.15
NDE1-211ENST00000576502 TROQ12816 1431 aaPredicted RBP22.23■■□□□ 1.15
NDE1-211ENST00000576502 TTC37Q6PGP7 1564 aa22.23■■□□□ 1.15
NDE1-211ENST00000576502 FANCAO15360 1455 aa22.22■■□□□ 1.15
NDE1-211ENST00000576502 LRRIQ1Q96JM4 1722 aa22.2■■□□□ 1.14
NDE1-211ENST00000576502 MYO5CQ9NQX4 1742 aa22.19■■□□□ 1.14
NDE1-211ENST00000576502 CEP162Q5TB80 1403 aa22.18■■□□□ 1.14
NDE1-211ENST00000576502 AKNAQ7Z591 1439 aa22.18■■□□□ 1.14
NDE1-211ENST00000576502 PLCH2O75038 1416 aa22.17■■□□□ 1.14
NDE1-211ENST00000576502 DENND4BO75064 1496 aaPredicted RBP22.15■■□□□ 1.14
NDE1-211ENST00000576502 RAPGEF3O95398 923 aa22.13■■□□□ 1.13
NDE1-211ENST00000576502 EFCAB2Q5VUJ9 269 aa22.13■■□□□ 1.13
NDE1-211ENST00000576502 ADGRL1O94910 1474 aa22.11■■□□□ 1.13
NDE1-211ENST00000576502 KDM4FA0A1W2PPD8 638 aa22.11■■□□□ 1.13
NDE1-211ENST00000576502 RICTORQ6R327 1708 aa22.09■■□□□ 1.13
NDE1-211ENST00000576502 ARHGAP5Q13017 1502 aa22.08■■□□□ 1.13
NDE1-211ENST00000576502 FRMPD1Q5SYB0 1578 aa22.08■■□□□ 1.12
NDE1-211ENST00000576502 SCAPERQ9BY12 1400 aa22.05■■□□□ 1.12
NDE1-211ENST00000576502 ZMYM4Q5VZL5 1548 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms