RNA–Protein interactions for RNA: ENST00000575770.5

ABR-232, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5

Gene ABR, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-232ENST00000575770 KIAA0586Q9BVV6 1533 aa10.91□□□□□ -0.66
ABR-232ENST00000575770 FAM9AQ8IZU1 332 aaPredicted RBP10.91□□□□□ -0.66
ABR-232ENST00000575770 IQGAP2Q13576 1575 aa10.9□□□□□ -0.66
ABR-232ENST00000575770 SHROOM2Q13796 1616 aa10.9□□□□□ -0.66
ABR-232ENST00000575770 GOLGA3Q08378 1498 aa10.87□□□□□ -0.67
ABR-232ENST00000575770 ARHGEF11O15085 1522 aa10.87□□□□□ -0.67
ABR-232ENST00000575770 RIMBP3CA6NJZ7 1639 aa10.86□□□□□ -0.67
ABR-232ENST00000575770 RIMBP3BA6NNM3 1639 aa10.86□□□□□ -0.67
ABR-232ENST00000575770 RIMBP3Q9UFD9 1639 aa10.86□□□□□ -0.67
ABR-232ENST00000575770 CARMIL2Q6F5E8 1435 aa10.84□□□□□ -0.67
ABR-232ENST00000575770 JPH4Q96JJ6 628 aa10.83□□□□□ -0.68
ABR-232ENST00000575770 UGGT2Q9NYU1 1516 aa10.83□□□□□ -0.68
ABR-232ENST00000575770 PRG4Q92954 1404 aaPredicted RBP10.82□□□□□ -0.68
ABR-232ENST00000575770 UBTFP17480 764 aaKnown RBP10.81□□□□□ -0.68
ABR-232ENST00000575770 KIAA0556O60303 1618 aa10.78□□□□□ -0.68
ABR-232ENST00000575770 EFCAB5A4FU69 1503 aa10.78□□□□□ -0.68
ABR-232ENST00000575770 ARAP1Q96P48 1450 aa10.77□□□□□ -0.69
ABR-232ENST00000575770 ERCC6L2Q5T890 1561 aa10.76□□□□□ -0.69
ABR-232ENST00000575770 SAMD9Q5K651 1589 aa10.75□□□□□ -0.69
ABR-232ENST00000575770 TNIKQ9UKE5 1360 aa10.75□□□□□ -0.69
ABR-232ENST00000575770 DISP1Q96F81 1524 aa10.74□□□□□ -0.69
ABR-232ENST00000575770 EHMT2Q96KQ7 1210 aa10.73□□□□□ -0.69
ABR-232ENST00000575770 PTPRGP23470 1445 aa10.72□□□□□ -0.69
ABR-232ENST00000575770 CYB5RLQ6IPT4 315 aa10.71□□□□□ -0.69
ABR-232ENST00000575770 RANGAP1P46060 587 aaPredicted RBP10.67□□□□□ -0.7
ABR-232ENST00000575770 CLIP1P30622 1438 aa10.67□□□□□ -0.7
ABR-232ENST00000575770 FMN1Q68DA7 1419 aa10.67□□□□□ -0.7
ABR-232ENST00000575770 ABCC2Q92887 1545 aa10.66□□□□□ -0.7
ABR-232ENST00000575770 UACAQ9BZF9 1416 aa10.66□□□□□ -0.7
ABR-232ENST00000575770 ADCY10Q96PN6 1610 aa10.66□□□□□ -0.7
ABR-232ENST00000575770 TTBK1Q5TCY1 1321 aaPredicted RBP10.65□□□□□ -0.7
ABR-232ENST00000575770 UHRF1BP1LA0JNW5 1464 aa10.65□□□□□ -0.7
ABR-232ENST00000575770 ARHGAP35Q9NRY4 1499 aa10.65□□□□□ -0.7
ABR-232ENST00000575770 FHOD3Q2V2M9 1422 aa10.65□□□□□ -0.7
ABR-232ENST00000575770 CEP162Q5TB80 1403 aa10.65□□□□□ -0.7
ABR-232ENST00000575770 NPM1P06748 294 aaKnown RBP eCLIP10.64□□□□□ -0.71
ABR-232ENST00000575770 RAPGEF6Q8TEU7 1601 aa10.64□□□□□ -0.71
ABR-232ENST00000575770 P3H3Q8IVL6 736 aa10.63□□□□□ -0.71
ABR-232ENST00000575770 ABCA8O94911 1581 aa10.63□□□□□ -0.71
ABR-232ENST00000575770 HECW1Q76N89 1606 aa10.62□□□□□ -0.71
ABR-232ENST00000575770 PLB1Q6P1J6 1458 aa10.61□□□□□ -0.71
ABR-232ENST00000575770 LOC105371045A0A1W2PR82 267 aa10.6□□□□□ -0.71
ABR-232ENST00000575770 MAPKBP1O60336 1514 aa10.59□□□□□ -0.71
ABR-232ENST00000575770 ZCCHC11Q5TAX3 1644 aaKnown RBP10.59□□□□□ -0.71
ABR-232ENST00000575770 KDM5BQ9UGL1 1544 aa10.58□□□□□ -0.72
ABR-232ENST00000575770 FYCO1Q9BQS8 1478 aa10.57□□□□□ -0.72
ABR-232ENST00000575770 PCF11O94913 1555 aaKnown RBP10.56□□□□□ -0.72
ABR-232ENST00000575770 CCDC18Q5T9S5 1454 aa10.55□□□□□ -0.72
ABR-232ENST00000575770 CASKIN1Q8WXD9 1431 aa10.55□□□□□ -0.72
ABR-232ENST00000575770 NUP153P49790 1475 aaKnown RBP10.55□□□□□ -0.72
ABR-232ENST00000575770 ASXL2Q76L83 1435 aa10.52□□□□□ -0.73
ABR-232ENST00000575770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.52□□□□□ -0.73
ABR-232ENST00000575770 HNRNPUL2Q1KMD3 747 aaKnown RBP10.52□□□□□ -0.73
ABR-232ENST00000575770 ATP1B4Q9UN42 357 aaPredicted RBP10.52□□□□□ -0.73
ABR-232ENST00000575770 CDK11AQ9UQ88 783 aaPredicted RBP10.52□□□□□ -0.73
ABR-232ENST00000575770 WDR7Q9Y4E6 1490 aa10.52□□□□□ -0.73
ABR-232ENST00000575770 EPRSP07814 1512 aaKnown RBP10.52□□□□□ -0.73
ABR-232ENST00000575770 VPS8Q8N3P4 1428 aa10.51□□□□□ -0.73
ABR-232ENST00000575770 ATP10BO94823 1461 aa10.51□□□□□ -0.73
ABR-232ENST00000575770 DIP2BQ9P265 1576 aa10.5□□□□□ -0.73
ABR-232ENST00000575770 ABCC10Q5T3U5 1492 aa10.49□□□□□ -0.73
ABR-232ENST00000575770 KIF13AQ9H1H9 1805 aa10.49□□□□□ -0.73
ABR-232ENST00000575770 TRHP20396 242 aaPredicted RBP10.49□□□□□ -0.73
ABR-232ENST00000575770 LRRIQ1Q96JM4 1722 aa10.49□□□□□ -0.73
ABR-232ENST00000575770 CDK13Q14004 1512 aaKnown RBP10.48□□□□□ -0.73
ABR-232ENST00000575770 GLI2P10070 1586 aa10.48□□□□□ -0.73
ABR-232ENST00000575770 CFAP43Q8NDM7 1665 aa10.47□□□□□ -0.73
ABR-232ENST00000575770 PLEKHD1A6NEE1 506 aa10.47□□□□□ -0.73
ABR-232ENST00000575770 ARID3CA6NKF2 412 aa10.47□□□□□ -0.73
ABR-232ENST00000575770 KIF14Q15058 1648 aa10.46□□□□□ -0.74
ABR-232ENST00000575770 APLP2Q06481 763 aa10.45□□□□□ -0.74
ABR-232ENST00000575770 FAM69CQ0P6D2 419 aa10.44□□□□□ -0.74
ABR-232ENST00000575770 ABCA9Q8IUA7 1624 aa10.44□□□□□ -0.74
ABR-232ENST00000575770 MAP3K4Q9Y6R4 1608 aa10.44□□□□□ -0.74
ABR-232ENST00000575770 MAP3K1Q13233 1512 aa10.43□□□□□ -0.74
ABR-232ENST00000575770 TROQ12816 1431 aaPredicted RBP10.43□□□□□ -0.74
ABR-232ENST00000575770 TIAM1Q13009 1591 aa10.43□□□□□ -0.74
ABR-232ENST00000575770 EHBP1L1Q8N3D4 1523 aa10.43□□□□□ -0.74
ABR-232ENST00000575770 TEX14Q8IWB6 1497 aa10.42□□□□□ -0.74
ABR-232ENST00000575770 TSPOAP1O95153 1857 aa10.42□□□□□ -0.74
ABR-232ENST00000575770 MTUS2Q5JR59 1369 aa10.42□□□□□ -0.74
ABR-232ENST00000575770 CFAP74Q9C0B2 1584 aa10.41□□□□□ -0.74
ABR-232ENST00000575770 KCNH8Q96L42 1107 aa10.41□□□□□ -0.74
ABR-232ENST00000575770 MYO5CQ9NQX4 1742 aa10.41□□□□□ -0.74
ABR-232ENST00000575770 SUPT6HQ7KZ85 1726 aaKnown RBP10.39□□□□□ -0.75
ABR-232ENST00000575770 CD109Q6YHK3 1445 aa10.39□□□□□ -0.75
ABR-232ENST00000575770 TTC37Q6PGP7 1564 aa10.38□□□□□ -0.75
ABR-232ENST00000575770 MAGI3Q5TCQ9 1506 aa10.38□□□□□ -0.75
ABR-232ENST00000575770 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.38□□□□□ -0.75
ABR-232ENST00000575770 ITSN2Q9NZM3 1697 aa10.38□□□□□ -0.75
ABR-232ENST00000575770 ARAP3Q8WWN8 1544 aa10.37□□□□□ -0.75
ABR-232ENST00000575770 LRRC9Q6ZRR7 1453 aa10.36□□□□□ -0.75
ABR-232ENST00000575770 PPRC1Q5VV67 1664 aaKnown RBP10.36□□□□□ -0.75
ABR-232ENST00000575770 PREX2Q70Z35 1606 aa10.35□□□□□ -0.75
ABR-232ENST00000575770 PHLDB1Q86UU1 1377 aa10.35□□□□□ -0.75
ABR-232ENST00000575770 CDC42BPAQ5VT25 1732 aa10.34□□□□□ -0.75
ABR-232ENST00000575770 NEO1Q92859 1461 aa10.34□□□□□ -0.75
ABR-232ENST00000575770 ARHGAP5Q13017 1502 aa10.33□□□□□ -0.76
ABR-232ENST00000575770 CCNB3Q8WWL7 1395 aa10.33□□□□□ -0.76
ABR-232ENST00000575770 FANCAO15360 1455 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms