RNA–Protein interactions for RNA: ENST00000574596.1

SLC47A1-208, Transcript of solute carrier family 47 member 1, human

Gene SLC47A1, Length 1,755 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC47A1-208	ENST00000574596	TNIK	Q9UKE5	1360 aa		33.62	■■■□□ 2.97
SLC47A1-208	ENST00000574596	NUP160	Q12769	1436 aa		33.54	■■■□□ 2.96
SLC47A1-208	ENST00000574596	CTTNBP2	Q8WZ74	1663 aa		33.53	■■■□□ 2.96
SLC47A1-208	ENST00000574596	CEP162	Q5TB80	1403 aa		33.47	■■■□□ 2.95
SLC47A1-208	ENST00000574596	KIAA0586	Q9BVV6	1533 aa		33.43	■■■□□ 2.94
SLC47A1-208	ENST00000574596	IQGAP2	Q13576	1575 aa		33.41	■■■□□ 2.94
SLC47A1-208	ENST00000574596	CLIP1	P30622	1438 aa		33.35	■■■□□ 2.93
SLC47A1-208	ENST00000574596	P3H3	Q8IVL6	736 aa		33.32	■■■□□ 2.92
SLC47A1-208	ENST00000574596	CLASP1	Q7Z460	1538 aa		33.32	■■■□□ 2.92
SLC47A1-208	ENST00000574596	OSCAR	Q8IYS5	282 aa		33.31	■■■□□ 2.92
SLC47A1-208	ENST00000574596	ARHGAP35	Q9NRY4	1499 aa		33.29	■■■□□ 2.92
SLC47A1-208	ENST00000574596	JPH4	Q96JJ6	628 aa		33.28	■■■□□ 2.92
SLC47A1-208	ENST00000574596	UGGT2	Q9NYU1	1516 aa		33.23	■■■□□ 2.91
SLC47A1-208	ENST00000574596	ARAP1	Q96P48	1450 aa		33.21	■■■□□ 2.91
SLC47A1-208	ENST00000574596	DISP1	Q96F81	1524 aa		33.2	■■■□□ 2.91
SLC47A1-208	ENST00000574596	SAMD9	Q5K651	1589 aa		33.18	■■■□□ 2.9
SLC47A1-208	ENST00000574596	FHOD3	Q2V2M9	1422 aa		33.18	■■■□□ 2.9
SLC47A1-208	ENST00000574596	ERCC6L2	Q5T890	1561 aa		33.17	■■■□□ 2.9
SLC47A1-208	ENST00000574596	SHROOM2	Q13796	1616 aa		33.16	■■■□□ 2.9
SLC47A1-208	ENST00000574596	PRG4	Q92954	1404 aa	Predicted RBP	33.14	■■■□□ 2.9
SLC47A1-208	ENST00000574596	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.12	■■■□□ 2.89
SLC47A1-208	ENST00000574596	KIAA0556	O60303	1618 aa		33.1	■■■□□ 2.89
SLC47A1-208	ENST00000574596	EFCAB5	A4FU69	1503 aa		33.09	■■■□□ 2.89
SLC47A1-208	ENST00000574596	CARMIL2	Q6F5E8	1435 aa		32.98	■■■□□ 2.87
SLC47A1-208	ENST00000574596	VPS8	Q8N3P4	1428 aa		32.92	■■■□□ 2.86
SLC47A1-208	ENST00000574596	PCF11	O94913	1555 aa	Known RBP	32.84	■■■□□ 2.85
SLC47A1-208	ENST00000574596	PTPRG	P23470	1445 aa		32.82	■■■□□ 2.84
SLC47A1-208	ENST00000574596	ARHGEF11	O15085	1522 aa		32.82	■■■□□ 2.84
SLC47A1-208	ENST00000574596	PLB1	Q6P1J6	1458 aa		32.82	■■■□□ 2.84
SLC47A1-208	ENST00000574596	FMN1	Q68DA7	1419 aa		32.8	■■■□□ 2.84
SLC47A1-208	ENST00000574596	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.8	■■■□□ 2.84
SLC47A1-208	ENST00000574596	ARID3C	A6NKF2	412 aa		32.76	■■■□□ 2.84
SLC47A1-208	ENST00000574596	RIMBP3C	A6NJZ7	1639 aa		32.73	■■■□□ 2.83
SLC47A1-208	ENST00000574596	RIMBP3B	A6NNM3	1639 aa		32.73	■■■□□ 2.83
SLC47A1-208	ENST00000574596	RIMBP3	Q9UFD9	1639 aa		32.73	■■■□□ 2.83
SLC47A1-208	ENST00000574596	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.73	■■■□□ 2.83
SLC47A1-208	ENST00000574596	CASKIN1	Q8WXD9	1431 aa		32.72	■■■□□ 2.83
SLC47A1-208	ENST00000574596	LRRIQ1	Q96JM4	1722 aa		32.68	■■■□□ 2.82
SLC47A1-208	ENST00000574596	ABCA8	O94911	1581 aa		32.67	■■■□□ 2.82
SLC47A1-208	ENST00000574596	RAPGEF6	Q8TEU7	1601 aa		32.67	■■■□□ 2.82
SLC47A1-208	ENST00000574596	FYCO1	Q9BQS8	1478 aa		32.66	■■■□□ 2.82
SLC47A1-208	ENST00000574596	NUP153	P49790	1475 aa	Known RBP	32.64	■■■□□ 2.82
SLC47A1-208	ENST00000574596	UACA	Q9BZF9	1416 aa		32.6	■■■□□ 2.81
SLC47A1-208	ENST00000574596	CDK13	Q14004	1512 aa	Known RBP	32.59	■■■□□ 2.81
SLC47A1-208	ENST00000574596	CYB5RL	Q6IPT4	315 aa		32.58	■■■□□ 2.81
SLC47A1-208	ENST00000574596	HECW1	Q76N89	1606 aa		32.56	■■■□□ 2.8
SLC47A1-208	ENST00000574596	KANK4	Q5T7N3	995 aa	Predicted RBP	32.55	■■■□□ 2.8
SLC47A1-208	ENST00000574596	EPRS	P07814	1512 aa	Known RBP	32.54	■■■□□ 2.8
SLC47A1-208	ENST00000574596	ADCY10	Q96PN6	1610 aa		32.53	■■■□□ 2.8
SLC47A1-208	ENST00000574596	ABCC2	Q92887	1545 aa		32.52	■■■□□ 2.8
SLC47A1-208	ENST00000574596	TIAM1	Q13009	1591 aa		32.49	■■■□□ 2.79
SLC47A1-208	ENST00000574596	ATP10B	O94823	1461 aa		32.48	■■■□□ 2.79
SLC47A1-208	ENST00000574596	APLP2	Q06481	763 aa		32.47	■■■□□ 2.79
SLC47A1-208	ENST00000574596	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.45	■■■□□ 2.78
SLC47A1-208	ENST00000574596	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.45	■■■□□ 2.78
SLC47A1-208	ENST00000574596	DNAJC5	Q9H3Z4	198 aa		32.45	■■■□□ 2.78
SLC47A1-208	ENST00000574596	CFAP43	Q8NDM7	1665 aa		32.45	■■■□□ 2.78
SLC47A1-208	ENST00000574596	UHRF1BP1L	A0JNW5	1464 aa		32.44	■■■□□ 2.78
SLC47A1-208	ENST00000574596	MAGI3	Q5TCQ9	1506 aa		32.44	■■■□□ 2.78
SLC47A1-208	ENST00000574596	CCDC18	Q5T9S5	1454 aa		32.39	■■■□□ 2.78
SLC47A1-208	ENST00000574596	MAP3K1	Q13233	1512 aa		32.36	■■■□□ 2.77
SLC47A1-208	ENST00000574596	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.36	■■■□□ 2.77
SLC47A1-208	ENST00000574596	LRRC9	Q6ZRR7	1453 aa		32.36	■■■□□ 2.77
SLC47A1-208	ENST00000574596	KDM5B	Q9UGL1	1544 aa		32.35	■■■□□ 2.77
SLC47A1-208	ENST00000574596	MTUS2	Q5JR59	1369 aa		32.28	■■■□□ 2.76
SLC47A1-208	ENST00000574596	PLEKHD1	A6NEE1	506 aa		32.19	■■■□□ 2.74
SLC47A1-208	ENST00000574596	EHBP1L1	Q8N3D4	1523 aa		32.18	■■■□□ 2.74
SLC47A1-208	ENST00000574596	TRO	Q12816	1431 aa	Predicted RBP	32.18	■■■□□ 2.74
SLC47A1-208	ENST00000574596	KIF14	Q15058	1648 aa		32.17	■■■□□ 2.74
SLC47A1-208	ENST00000574596	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.17	■■■□□ 2.74
SLC47A1-208	ENST00000574596	NPM1	P06748	294 aa	Known RBP eCLIP	32.15	■■■□□ 2.74
SLC47A1-208	ENST00000574596	ASXL2	Q76L83	1435 aa		32.15	■■■□□ 2.74
SLC47A1-208	ENST00000574596	KCNH8	Q96L42	1107 aa		32.14	■■■□□ 2.74
SLC47A1-208	ENST00000574596	PHLDB1	Q86UU1	1377 aa		32.11	■■■□□ 2.73
SLC47A1-208	ENST00000574596	NCOA2	Q15596	1464 aa		32.11	■■■□□ 2.73
SLC47A1-208	ENST00000574596	WDR7	Q9Y4E6	1490 aa		32.08	■■■□□ 2.73
SLC47A1-208	ENST00000574596	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.06	■■■□□ 2.72
SLC47A1-208	ENST00000574596	ABCC10	Q5T3U5	1492 aa		32	■■■□□ 2.71
SLC47A1-208	ENST00000574596	TTC37	Q6PGP7	1564 aa		31.98	■■■□□ 2.71
SLC47A1-208	ENST00000574596	MAPKBP1	O60336	1514 aa		31.98	■■■□□ 2.71
SLC47A1-208	ENST00000574596	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.98	■■■□□ 2.71
SLC47A1-208	ENST00000574596	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.9	■■■□□ 2.7
SLC47A1-208	ENST00000574596	CCNB3	Q8WWL7	1395 aa		31.9	■■■□□ 2.7
SLC47A1-208	ENST00000574596	MYOM3	Q5VTT5	1437 aa		31.89	■■■□□ 2.7
SLC47A1-208	ENST00000574596	CDC42BPA	Q5VT25	1732 aa		31.87	■■■□□ 2.69
SLC47A1-208	ENST00000574596	ZNF644	Q9H582	1327 aa	Predicted RBP	31.84	■■■□□ 2.69
SLC47A1-208	ENST00000574596	FGD6	Q6ZV73	1430 aa		31.84	■■■□□ 2.69
SLC47A1-208	ENST00000574596	ABCA9	Q8IUA7	1624 aa		31.82	■■■□□ 2.68
SLC47A1-208	ENST00000574596	TRIM26	Q12899	539 aa	Predicted RBP	31.81	■■■□□ 2.68
SLC47A1-208	ENST00000574596	RRBP1	Q9P2E9	1410 aa	Known RBP	31.81	■■■□□ 2.68
SLC47A1-208	ENST00000574596	DIP2B	Q9P265	1576 aa		31.8	■■■□□ 2.68
SLC47A1-208	ENST00000574596	CDC42BPB	Q9Y5S2	1711 aa		31.79	■■■□□ 2.68
SLC47A1-208	ENST00000574596	FAM69C	Q0P6D2	419 aa		31.79	■■■□□ 2.68
SLC47A1-208	ENST00000574596	FAM50A	Q14320	339 aa	Known RBP	31.77	■■■□□ 2.68
SLC47A1-208	ENST00000574596	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.77	■■■□□ 2.68
SLC47A1-208	ENST00000574596	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.77	■■■□□ 2.68
SLC47A1-208	ENST00000574596	PCGF6	Q9BYE7	350 aa		31.76	■■■□□ 2.68
SLC47A1-208	ENST00000574596	PREX2	Q70Z35	1606 aa		31.76	■■■□□ 2.67
SLC47A1-208	ENST00000574596	MYO5C	Q9NQX4	1742 aa		31.75	■■■□□ 2.67
SLC47A1-208	ENST00000574596	PTPN23	Q9H3S7	1636 aa		31.74	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms