RNA–Protein interactions for RNA: ENST00000574596.1

SLC47A1-208, Transcript of solute carrier family 47 member 1, humanhuman

Gene SLC47A1, Length 1,755 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-208ENST00000574596 NISCHQ9Y2I1 1504 aa48.69■■■■■ 5.38
SLC47A1-208ENST00000574596 CCDC180Q9P1Z9 1646 aa42.68■■■■■ 4.42
SLC47A1-208ENST00000574596 ABCC9O60706 1549 aa41.21■■■■■ 4.19
SLC47A1-208ENST00000574596 ZCCHC6Q5VYS8 1495 aaKnown RBP40.75■■■■■ 4.11
SLC47A1-208ENST00000574596 DCAF8L2P0C7V8 631 aa40.55■■■■■ 4.08
SLC47A1-208ENST00000574596 DCAF1Q9Y4B6 1507 aa40.13■■■■■ 4.01
SLC47A1-208ENST00000574596 NACADO15069 1562 aa39.92■■■■□ 3.98
SLC47A1-208ENST00000574596 MYO15BQ96JP2 1530 aa39.88■■■■□ 3.98
SLC47A1-208ENST00000574596 RB1CC1Q8TDY2 1594 aa39.77■■■■□ 3.96
SLC47A1-208ENST00000574596 SHROOM4Q9ULL8 1493 aa39.4■■■■□ 3.9
SLC47A1-208ENST00000574596 SCRIBQ14160 1630 aa39.33■■■■□ 3.89
SLC47A1-208ENST00000574596 UNC13AQ9UPW8 1703 aa39.08■■■■□ 3.85
SLC47A1-208ENST00000574596 PABPN1Q86U42 306 aaKnown RBP eCLIP38.78■■■■□ 3.8
SLC47A1-208ENST00000574596 BICRAQ9NZM4 1560 aa38.74■■■■□ 3.79
SLC47A1-208ENST00000574596 CECR2Q9BXF3 1484 aa38.02■■■■□ 3.68
SLC47A1-208ENST00000574596 MROH2BQ7Z745 1585 aa37.67■■■■□ 3.62
SLC47A1-208ENST00000574596 BAZ1AQ9NRL2 1556 aaPredicted RBP37.58■■■■□ 3.61
SLC47A1-208ENST00000574596 SMARCA4P51532 1647 aa37.58■■■■□ 3.61
SLC47A1-208ENST00000574596 EIF4G1Q04637 1599 aaKnown RBP37.57■■■■□ 3.6
SLC47A1-208ENST00000574596 RSF1Q96T23 1441 aaPredicted RBP37.54■■■■□ 3.6
SLC47A1-208ENST00000574596 SUPT5HO00267 1087 aaKnown RBP37.49■■■■□ 3.59
SLC47A1-208ENST00000574596 WIZO95785 1651 aa37.33■■■■□ 3.57
SLC47A1-208ENST00000574596 CC2D2AQ9P2K1 1620 aa37.21■■■■□ 3.55
SLC47A1-208ENST00000574596 ATAD2BQ9ULI0 1458 aa37.16■■■■□ 3.54
SLC47A1-208ENST00000574596 DNAJC5BQ9UF47 199 aa37.14■■■■□ 3.54
SLC47A1-208ENST00000574596 PEG3Q9GZU2 1588 aa37.09■■■■□ 3.53
SLC47A1-208ENST00000574596 SMARCA2P51531 1590 aa37.01■■■■□ 3.52
SLC47A1-208ENST00000574596 NCAPD3P42695 1498 aa36.9■■■■□ 3.5
SLC47A1-208ENST00000574596 BAZ1BQ9UIG0 1483 aaKnown RBP36.87■■■■□ 3.49
SLC47A1-208ENST00000574596 TOP2AP11388 1531 aaKnown RBP36.81■■■■□ 3.48
SLC47A1-208ENST00000574596 HMGXB3Q12766 1538 aa36.76■■■■□ 3.48
SLC47A1-208ENST00000574596 CCDC88BA6NC98 1476 aa36.5■■■■□ 3.43
SLC47A1-208ENST00000574596 NESP48681 1621 aa36■■■■□ 3.35
SLC47A1-208ENST00000574596 CADPSQ9ULU8 1353 aa35.93■■■■□ 3.34
SLC47A1-208ENST00000574596 CFTRP13569 1480 aa35.91■■■■□ 3.34
SLC47A1-208ENST00000574596 LAMC3Q9Y6N6 1575 aa35.73■■■■□ 3.31
SLC47A1-208ENST00000574596 PRDM2Q13029 1718 aa35.6■■■■□ 3.29
SLC47A1-208ENST00000574596 ABCC8Q09428 1581 aa35.58■■■■□ 3.29
SLC47A1-208ENST00000574596 FANCD2Q9BXW9 1451 aa35.55■■■■□ 3.28
SLC47A1-208ENST00000574596 KIF21AQ7Z4S6 1674 aa35.49■■■■□ 3.27
SLC47A1-208ENST00000574596 CHIC1Q5VXU3 224 aa35.48■■■■□ 3.27
SLC47A1-208ENST00000574596 PDS5BQ9NTI5 1447 aa35.46■■■■□ 3.27
SLC47A1-208ENST00000574596 CEP164Q9UPV0 1460 aa35.36■■■■□ 3.25
SLC47A1-208ENST00000574596 WRNQ14191 1432 aaPredicted RBP eCLIP35.3■■■■□ 3.24
SLC47A1-208ENST00000574596 ERCC6Q03468 1493 aa35.3■■■■□ 3.24
SLC47A1-208ENST00000574596 SYNJ1O43426 1573 aa35.27■■■■□ 3.24
SLC47A1-208ENST00000574596 CUX1P39880 1505 aa35.25■■■■□ 3.23
SLC47A1-208ENST00000574596 URB2Q14146 1524 aaKnown RBP35.21■■■■□ 3.23
SLC47A1-208ENST00000574596 TRIM41Q8WV44 630 aa35.19■■■■□ 3.22
SLC47A1-208ENST00000574596 MRC2Q9UBG0 1479 aa35.11■■■■□ 3.21
SLC47A1-208ENST00000574596 TOPBP1Q92547 1522 aa35.1■■■■□ 3.21
SLC47A1-208ENST00000574596 TOP2BQ02880 1626 aa35.08■■■■□ 3.21
SLC47A1-208ENST00000574596 DNMBPQ6XZF7 1577 aa35.06■■■■□ 3.2
SLC47A1-208ENST00000574596 THOC2Q8NI27 1593 aaKnown RBP35.06■■■■□ 3.2
SLC47A1-208ENST00000574596 BIVM-ERCC5R4GMW8 1640 aa35.06■■■■□ 3.2
SLC47A1-208ENST00000574596 WDR62O43379 1518 aa34.95■■■■□ 3.19
SLC47A1-208ENST00000574596 FGD5Q6ZNL6 1462 aa34.95■■■■□ 3.19
SLC47A1-208ENST00000574596 POLA1P09884 1462 aaPredicted RBP34.89■■■■□ 3.18
SLC47A1-208ENST00000574596 RAD54L2Q9Y4B4 1467 aa34.85■■■■□ 3.17
SLC47A1-208ENST00000574596 CUX2O14529 1486 aa34.78■■■■□ 3.16
SLC47A1-208ENST00000574596 SOGA1O94964 1423 aa34.75■■■■□ 3.15
SLC47A1-208ENST00000574596 RUSC2Q8N2Y8 1516 aa34.72■■■■□ 3.15
SLC47A1-208ENST00000574596 FAM9AQ8IZU1 332 aaPredicted RBP34.68■■■■□ 3.14
SLC47A1-208ENST00000574596 TARBP1Q13395 1621 aaKnown RBP34.65■■■■□ 3.14
SLC47A1-208ENST00000574596 ABCA10Q8WWZ4 1543 aa34.56■■■■□ 3.12
SLC47A1-208ENST00000574596 TDRD9Q8NDG6 1382 aaKnown RBP34.56■■■■□ 3.12
SLC47A1-208ENST00000574596 WDR97A6NE52 1622 aa34.55■■■■□ 3.12
SLC47A1-208ENST00000574596 ZNF608Q9ULD9 1512 aaPredicted RBP34.54■■■■□ 3.12
SLC47A1-208ENST00000574596 IFT140Q96RY7 1462 aa34.54■■■■□ 3.12
SLC47A1-208ENST00000574596 AQRO60306 1485 aaKnown RBP eCLIP34.45■■■■□ 3.11
SLC47A1-208ENST00000574596 KIF27Q86VH2 1401 aa34.42■■■■□ 3.1
SLC47A1-208ENST00000574596 ABCA5Q8WWZ7 1642 aa34.37■■■■□ 3.09
SLC47A1-208ENST00000574596 GAPVD1Q14C86 1478 aa34.34■■■■□ 3.09
SLC47A1-208ENST00000574596 EHMT2Q96KQ7 1210 aa34.33■■■■□ 3.09
SLC47A1-208ENST00000574596 EIF4G3O43432 1585 aaKnown RBP34.33■■■■□ 3.09
SLC47A1-208ENST00000574596 CSRNP3Q8WYN3 585 aa34.3■■■■□ 3.08
SLC47A1-208ENST00000574596 IGF1RP08069 1367 aa34.29■■■■□ 3.08
SLC47A1-208ENST00000574596 EEA1Q15075 1411 aa34.26■■■■□ 3.08
SLC47A1-208ENST00000574596 LOC105371045A0A1W2PR82 267 aa34.2■■■■□ 3.07
SLC47A1-208ENST00000574596 PBRM1Q86U86 1689 aa34.19■■■■□ 3.06
SLC47A1-208ENST00000574596 GRIN2BQ13224 1484 aa34.14■■■■□ 3.06
SLC47A1-208ENST00000574596 ERICH3Q5RHP9 1530 aa34.11■■■■□ 3.05
SLC47A1-208ENST00000574596 SNAPC4Q5SXM2 1469 aa34.08■■■■□ 3.05
SLC47A1-208ENST00000574596 PRXQ9BXM0 1461 aa34.07■■■■□ 3.04
SLC47A1-208ENST00000574596 CARMIL1Q5VZK9 1371 aa34.06■■■■□ 3.04
SLC47A1-208ENST00000574596 RAPGEF2Q9Y4G8 1499 aa34.04■■■■□ 3.04
SLC47A1-208ENST00000574596 ADAMTS12P58397 1594 aa33.98■■■■□ 3.03
SLC47A1-208ENST00000574596 CUL7Q14999 1698 aa33.96■■■■□ 3.03
SLC47A1-208ENST00000574596 KIF21BO75037 1637 aa33.96■■■■□ 3.03
SLC47A1-208ENST00000574596 FHAD1B1AJZ9 1412 aa33.92■■■■□ 3.02
SLC47A1-208ENST00000574596 MAGI1Q96QZ7 1491 aaPredicted RBP33.9■■■■□ 3.02
SLC47A1-208ENST00000574596 FBLN2P98095 1184 aa33.88■■■■□ 3.01
SLC47A1-208ENST00000574596 GOLGA3Q08378 1498 aa33.86■■■■□ 3.01
SLC47A1-208ENST00000574596 UBTFP17480 764 aaKnown RBP33.82■■■■□ 3
SLC47A1-208ENST00000574596 SYNJ2O15056 1496 aa33.81■■■■□ 3
SLC47A1-208ENST00000574596 CHMP7Q8WUX9 453 aaPredicted RBP33.8■■■■□ 3
SLC47A1-208ENST00000574596 GRIN2AQ12879 1464 aa33.76■■■□□ 2.99
SLC47A1-208ENST00000574596 CHD1O14646 1710 aa33.73■■■□□ 2.99
SLC47A1-208ENST00000574596 RANGAP1P46060 587 aaPredicted RBP33.65■■■□□ 2.98
SLC47A1-208ENST00000574596 CEP170Q5SW79 1584 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms