RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 RANGAP1P46060 587 aaPredicted RBP34.17■■■■□ 3.06
CXCL16-203ENST00000574412 CEP170Q5SW79 1584 aa34.16■■■■□ 3.06
CXCL16-203ENST00000574412 NUP160Q12769 1436 aa34.07■■■■□ 3.05
CXCL16-203ENST00000574412 CEP162Q5TB80 1403 aa34.05■■■■□ 3.04
CXCL16-203ENST00000574412 IQGAP2Q13576 1575 aa34.03■■■■□ 3.04
CXCL16-203ENST00000574412 KIAA0586Q9BVV6 1533 aa34■■■■□ 3.03
CXCL16-203ENST00000574412 CLIP1P30622 1438 aa33.94■■■■□ 3.02
CXCL16-203ENST00000574412 CLASP1Q7Z460 1538 aa33.86■■■■□ 3.01
CXCL16-203ENST00000574412 OSCARQ8IYS5 282 aa33.83■■■■□ 3.01
CXCL16-203ENST00000574412 ARHGAP35Q9NRY4 1499 aa33.83■■■■□ 3.01
CXCL16-203ENST00000574412 P3H3Q8IVL6 736 aa33.81■■■■□ 3
CXCL16-203ENST00000574412 UGGT2Q9NYU1 1516 aa33.81■■■■□ 3
CXCL16-203ENST00000574412 JPH4Q96JJ6 628 aa33.79■■■■□ 3
CXCL16-203ENST00000574412 SAMD9Q5K651 1589 aa33.77■■■■□ 3
CXCL16-203ENST00000574412 EFCAB5A4FU69 1503 aa33.76■■■□□ 2.99
CXCL16-203ENST00000574412 SHROOM2Q13796 1616 aa33.73■■■□□ 2.99
CXCL16-203ENST00000574412 ARAP1Q96P48 1450 aa33.72■■■□□ 2.99
CXCL16-203ENST00000574412 DISP1Q96F81 1524 aa33.71■■■□□ 2.99
CXCL16-203ENST00000574412 FHOD3Q2V2M9 1422 aa33.71■■■□□ 2.99
CXCL16-203ENST00000574412 KIAA0556O60303 1618 aa33.69■■■□□ 2.98
CXCL16-203ENST00000574412 PRG4Q92954 1404 aaPredicted RBP33.67■■■□□ 2.98
CXCL16-203ENST00000574412 ERCC6L2Q5T890 1561 aa33.62■■■□□ 2.97
CXCL16-203ENST00000574412 TTBK1Q5TCY1 1321 aaPredicted RBP33.61■■■□□ 2.97
CXCL16-203ENST00000574412 CARMIL2Q6F5E8 1435 aa33.6■■■□□ 2.97
CXCL16-203ENST00000574412 VPS8Q8N3P4 1428 aa33.52■■■□□ 2.96
CXCL16-203ENST00000574412 FMN1Q68DA7 1419 aa33.43■■■□□ 2.94
CXCL16-203ENST00000574412 PCF11O94913 1555 aaKnown RBP33.42■■■□□ 2.94
CXCL16-203ENST00000574412 PTPRGP23470 1445 aa33.37■■■□□ 2.93
CXCL16-203ENST00000574412 ATP1B4Q9UN42 357 aaPredicted RBP33.36■■■□□ 2.93
CXCL16-203ENST00000574412 ARHGEF11O15085 1522 aa33.33■■■□□ 2.93
CXCL16-203ENST00000574412 PLB1Q6P1J6 1458 aa33.31■■■□□ 2.92
CXCL16-203ENST00000574412 CASKIN1Q8WXD9 1431 aa33.29■■■□□ 2.92
CXCL16-203ENST00000574412 FYCO1Q9BQS8 1478 aa33.29■■■□□ 2.92
CXCL16-203ENST00000574412 RAPGEF6Q8TEU7 1601 aa33.28■■■□□ 2.92
CXCL16-203ENST00000574412 RIMBP3CA6NJZ7 1639 aa33.26■■■□□ 2.92
CXCL16-203ENST00000574412 RIMBP3BA6NNM3 1639 aa33.26■■■□□ 2.92
CXCL16-203ENST00000574412 RIMBP3Q9UFD9 1639 aa33.26■■■□□ 2.92
CXCL16-203ENST00000574412 LRRIQ1Q96JM4 1722 aa33.25■■■□□ 2.91
CXCL16-203ENST00000574412 ARID3CA6NKF2 412 aa33.23■■■□□ 2.91
CXCL16-203ENST00000574412 ABCA8O94911 1581 aa33.23■■■□□ 2.91
CXCL16-203ENST00000574412 HECW1Q76N89 1606 aa33.22■■■□□ 2.91
CXCL16-203ENST00000574412 PPARGC1BQ86YN6 1023 aaKnown RBP33.18■■■□□ 2.9
CXCL16-203ENST00000574412 APLP2Q06481 763 aa33.17■■■□□ 2.9
CXCL16-203ENST00000574412 NUP153P49790 1475 aaKnown RBP33.16■■■□□ 2.9
CXCL16-203ENST00000574412 UACAQ9BZF9 1416 aa33.15■■■□□ 2.9
CXCL16-203ENST00000574412 CDK13Q14004 1512 aaKnown RBP33.12■■■□□ 2.89
CXCL16-203ENST00000574412 CFAP43Q8NDM7 1665 aa33.11■■■□□ 2.89
CXCL16-203ENST00000574412 TIAM1Q13009 1591 aa33.1■■■□□ 2.89
CXCL16-203ENST00000574412 EPRSP07814 1512 aaKnown RBP33.09■■■□□ 2.89
CXCL16-203ENST00000574412 ABCC2Q92887 1545 aa33.09■■■□□ 2.89
CXCL16-203ENST00000574412 ADCY10Q96PN6 1610 aa33.06■■■□□ 2.88
CXCL16-203ENST00000574412 CCDC18Q5T9S5 1454 aa33.04■■■□□ 2.88
CXCL16-203ENST00000574412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.03■■■□□ 2.88
CXCL16-203ENST00000574412 HNRNPUL2Q1KMD3 747 aaKnown RBP33.03■■■□□ 2.88
CXCL16-203ENST00000574412 CYB5RLQ6IPT4 315 aa33.03■■■□□ 2.88
CXCL16-203ENST00000574412 KANK4Q5T7N3 995 aaPredicted RBP33.01■■■□□ 2.87
CXCL16-203ENST00000574412 UHRF1BP1LA0JNW5 1464 aa33■■■□□ 2.87
CXCL16-203ENST00000574412 MAP3K1Q13233 1512 aa32.99■■■□□ 2.87
CXCL16-203ENST00000574412 ATP10BO94823 1461 aa32.98■■■□□ 2.87
CXCL16-203ENST00000574412 ZCCHC11Q5TAX3 1644 aaKnown RBP32.94■■■□□ 2.86
CXCL16-203ENST00000574412 LRRC9Q6ZRR7 1453 aa32.93■■■□□ 2.86
CXCL16-203ENST00000574412 MAGI3Q5TCQ9 1506 aa32.92■■■□□ 2.86
CXCL16-203ENST00000574412 KDM5BQ9UGL1 1544 aa32.88■■■□□ 2.85
CXCL16-203ENST00000574412 MTUS2Q5JR59 1369 aa32.88■■■□□ 2.85
CXCL16-203ENST00000574412 DNAJC5Q9H3Z4 198 aa32.85■■■□□ 2.85
CXCL16-203ENST00000574412 EHBP1L1Q8N3D4 1523 aa32.82■■■□□ 2.84
CXCL16-203ENST00000574412 CDK11AQ9UQ88 783 aaPredicted RBP32.81■■■□□ 2.84
CXCL16-203ENST00000574412 PLEKHD1A6NEE1 506 aa32.76■■■□□ 2.84
CXCL16-203ENST00000574412 NPM1P06748 294 aaKnown RBP eCLIP32.76■■■□□ 2.84
CXCL16-203ENST00000574412 TROQ12816 1431 aaPredicted RBP32.75■■■□□ 2.83
CXCL16-203ENST00000574412 SUPT6HQ7KZ85 1726 aaKnown RBP32.73■■■□□ 2.83
CXCL16-203ENST00000574412 KIF14Q15058 1648 aa32.71■■■□□ 2.83
CXCL16-203ENST00000574412 NCOA2Q15596 1464 aa32.67■■■□□ 2.82
CXCL16-203ENST00000574412 ASXL2Q76L83 1435 aa32.66■■■□□ 2.82
CXCL16-203ENST00000574412 KCNH8Q96L42 1107 aa32.64■■■□□ 2.82
CXCL16-203ENST00000574412 TRIM26Q12899 539 aaPredicted RBP32.63■■■□□ 2.81
CXCL16-203ENST00000574412 WDR7Q9Y4E6 1490 aa32.63■■■□□ 2.81
CXCL16-203ENST00000574412 PHLDB1Q86UU1 1377 aa32.61■■■□□ 2.81
CXCL16-203ENST00000574412 PCGF6Q9BYE7 350 aa32.56■■■□□ 2.8
CXCL16-203ENST00000574412 MAPKBP1O60336 1514 aa32.55■■■□□ 2.8
CXCL16-203ENST00000574412 TTC37Q6PGP7 1564 aa32.52■■■□□ 2.8
CXCL16-203ENST00000574412 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.51■■■□□ 2.79
CXCL16-203ENST00000574412 ABCC10Q5T3U5 1492 aa32.5■■■□□ 2.79
CXCL16-203ENST00000574412 CCNB3Q8WWL7 1395 aa32.48■■■□□ 2.79
CXCL16-203ENST00000574412 CDC42BPAQ5VT25 1732 aa32.47■■■□□ 2.79
CXCL16-203ENST00000574412 MYOM3Q5VTT5 1437 aa32.47■■■□□ 2.79
CXCL16-203ENST00000574412 ITSN2Q9NZM3 1697 aa32.43■■■□□ 2.78
CXCL16-203ENST00000574412 GPATCH8Q9UKJ3 1502 aaKnown RBP32.41■■■□□ 2.78
CXCL16-203ENST00000574412 MYO5CQ9NQX4 1742 aa32.41■■■□□ 2.78
CXCL16-203ENST00000574412 FGD6Q6ZV73 1430 aa32.4■■■□□ 2.78
CXCL16-203ENST00000574412 ABCA9Q8IUA7 1624 aa32.39■■■□□ 2.78
CXCL16-203ENST00000574412 RRBP1Q9P2E9 1410 aaKnown RBP32.38■■■□□ 2.77
CXCL16-203ENST00000574412 CDC42BPBQ9Y5S2 1711 aa32.37■■■□□ 2.77
CXCL16-203ENST00000574412 PREX2Q70Z35 1606 aa32.36■■■□□ 2.77
CXCL16-203ENST00000574412 PTPN23Q9H3S7 1636 aa32.34■■■□□ 2.77
CXCL16-203ENST00000574412 DIP2BQ9P265 1576 aa32.33■■■□□ 2.77
CXCL16-203ENST00000574412 FAM50AQ14320 339 aaKnown RBP32.33■■■□□ 2.77
CXCL16-203ENST00000574412 CFDP1Q9UEE9 299 aaPredicted RBP32.33■■■□□ 2.77
CXCL16-203ENST00000574412 ZNF777Q9ULD5 760 aaPredicted RBP32.3■■■□□ 2.76
CXCL16-203ENST00000574412 ARHGAP5Q13017 1502 aa32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms