RNA–Protein interactions for RNA: ENST00000573559.3

ABR-221, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-221ENST00000573559 KIAA0586Q9BVV6 1533 aa35.43■■■■□ 3.26
ABR-221ENST00000573559 CYB5RLQ6IPT4 315 aa35.43■■■■□ 3.26
ABR-221ENST00000573559 ERCC6L2Q5T890 1561 aa35.42■■■■□ 3.26
ABR-221ENST00000573559 EEA1Q15075 1411 aa35.4■■■■□ 3.26
ABR-221ENST00000573559 JPH4Q96JJ6 628 aa35.37■■■■□ 3.25
ABR-221ENST00000573559 PRXQ9BXM0 1461 aa35.35■■■■□ 3.25
ABR-221ENST00000573559 PRG4Q92954 1404 aaPredicted RBP35.35■■■■□ 3.25
ABR-221ENST00000573559 CSRNP3Q8WYN3 585 aa35.34■■■■□ 3.25
ABR-221ENST00000573559 FAM9AQ8IZU1 332 aaPredicted RBP35.33■■■■□ 3.25
ABR-221ENST00000573559 IQGAP2Q13576 1575 aa35.3■■■■□ 3.24
ABR-221ENST00000573559 CTTNBP2Q8WZ74 1663 aa35.24■■■■□ 3.23
ABR-221ENST00000573559 CARMIL2Q6F5E8 1435 aa35.08■■■■□ 3.21
ABR-221ENST00000573559 KIF21BO75037 1637 aa35.07■■■■□ 3.21
ABR-221ENST00000573559 UGGT2Q9NYU1 1516 aa35.06■■■■□ 3.2
ABR-221ENST00000573559 DISP1Q96F81 1524 aa35.01■■■■□ 3.19
ABR-221ENST00000573559 KIAA0556O60303 1618 aa34.97■■■■□ 3.19
ABR-221ENST00000573559 TTBK1Q5TCY1 1321 aaPredicted RBP34.96■■■■□ 3.19
ABR-221ENST00000573559 TNIKQ9UKE5 1360 aa34.95■■■■□ 3.19
ABR-221ENST00000573559 PTPRGP23470 1445 aa34.92■■■■□ 3.18
ABR-221ENST00000573559 EHMT2Q96KQ7 1210 aa34.92■■■■□ 3.18
ABR-221ENST00000573559 GOLGA3Q08378 1498 aa34.89■■■■□ 3.18
ABR-221ENST00000573559 ADCY10Q96PN6 1610 aa34.84■■■■□ 3.17
ABR-221ENST00000573559 UBTFP17480 764 aaKnown RBP34.78■■■■□ 3.16
ABR-221ENST00000573559 RANGAP1P46060 587 aaPredicted RBP34.76■■■■□ 3.16
ABR-221ENST00000573559 TRHP20396 242 aaPredicted RBP34.75■■■■□ 3.15
ABR-221ENST00000573559 SAMD9Q5K651 1589 aa34.73■■■■□ 3.15
ABR-221ENST00000573559 NPM1P06748 294 aaKnown RBP eCLIP34.7■■■■□ 3.15
ABR-221ENST00000573559 P3H3Q8IVL6 736 aa34.7■■■■□ 3.15
ABR-221ENST00000573559 UACAQ9BZF9 1416 aa34.69■■■■□ 3.14
ABR-221ENST00000573559 ABCC2Q92887 1545 aa34.65■■■■□ 3.14
ABR-221ENST00000573559 UHRF1BP1LA0JNW5 1464 aa34.64■■■■□ 3.14
ABR-221ENST00000573559 EFCAB5A4FU69 1503 aa34.6■■■■□ 3.13
ABR-221ENST00000573559 PLB1Q6P1J6 1458 aa34.59■■■■□ 3.13
ABR-221ENST00000573559 MAPKBP1O60336 1514 aa34.56■■■■□ 3.12
ABR-221ENST00000573559 FHOD3Q2V2M9 1422 aa34.55■■■■□ 3.12
ABR-221ENST00000573559 ABCA8O94911 1581 aa34.55■■■■□ 3.12
ABR-221ENST00000573559 ZCCHC11Q5TAX3 1644 aaKnown RBP34.49■■■■□ 3.11
ABR-221ENST00000573559 KDM5BQ9UGL1 1544 aa34.48■■■■□ 3.11
ABR-221ENST00000573559 KIF13AQ9H1H9 1805 aa34.44■■■■□ 3.1
ABR-221ENST00000573559 RAPGEF6Q8TEU7 1601 aa34.42■■■■□ 3.1
ABR-221ENST00000573559 ARHGAP35Q9NRY4 1499 aa34.41■■■■□ 3.1
ABR-221ENST00000573559 ASXL2Q76L83 1435 aa34.4■■■■□ 3.1
ABR-221ENST00000573559 ABCC10Q5T3U5 1492 aa34.39■■■■□ 3.1
ABR-221ENST00000573559 DIP2BQ9P265 1576 aa34.39■■■■□ 3.1
ABR-221ENST00000573559 ARID3CA6NKF2 412 aa34.34■■■■□ 3.09
ABR-221ENST00000573559 FAM69CQ0P6D2 419 aa34.33■■■■□ 3.09
ABR-221ENST00000573559 FMN1Q68DA7 1419 aa34.25■■■■□ 3.07
ABR-221ENST00000573559 NUP153P49790 1475 aaKnown RBP34.25■■■■□ 3.07
ABR-221ENST00000573559 WDR7Q9Y4E6 1490 aa34.25■■■■□ 3.07
ABR-221ENST00000573559 CLIP1P30622 1438 aa34.24■■■■□ 3.07
ABR-221ENST00000573559 ATP10BO94823 1461 aa34.24■■■■□ 3.07
ABR-221ENST00000573559 EPRSP07814 1512 aaKnown RBP34.19■■■■□ 3.06
ABR-221ENST00000573559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.18■■■■□ 3.06
ABR-221ENST00000573559 HNRNPUL2Q1KMD3 747 aaKnown RBP34.18■■■■□ 3.06
ABR-221ENST00000573559 LOC105371045A0A1W2PR82 267 aa34.17■■■■□ 3.06
ABR-221ENST00000573559 TSPOAP1O95153 1857 aa34.17■■■■□ 3.06
ABR-221ENST00000573559 GLI2P10070 1586 aa34.16■■■■□ 3.06
ABR-221ENST00000573559 HECW1Q76N89 1606 aa34.15■■■■□ 3.06
ABR-221ENST00000573559 ATP1B4Q9UN42 357 aaPredicted RBP34.13■■■■□ 3.05
ABR-221ENST00000573559 CEP162Q5TB80 1403 aa34.11■■■■□ 3.05
ABR-221ENST00000573559 KCNH8Q96L42 1107 aa34.09■■■■□ 3.05
ABR-221ENST00000573559 CDK13Q14004 1512 aaKnown RBP34.08■■■■□ 3.05
ABR-221ENST00000573559 PCF11O94913 1555 aaKnown RBP34.06■■■■□ 3.04
ABR-221ENST00000573559 MAP3K4Q9Y6R4 1608 aa34.05■■■■□ 3.04
ABR-221ENST00000573559 PPRC1Q5VV67 1664 aaKnown RBP33.99■■■■□ 3.03
ABR-221ENST00000573559 CFAP43Q8NDM7 1665 aa33.99■■■■□ 3.03
ABR-221ENST00000573559 CASKIN1Q8WXD9 1431 aa33.98■■■■□ 3.03
ABR-221ENST00000573559 LRRIQ1Q96JM4 1722 aa33.97■■■■□ 3.03
ABR-221ENST00000573559 PLEKHD1A6NEE1 506 aa33.95■■■■□ 3.03
ABR-221ENST00000573559 FYCO1Q9BQS8 1478 aa33.94■■■■□ 3.02
ABR-221ENST00000573559 CD109Q6YHK3 1445 aa33.9■■■■□ 3.02
ABR-221ENST00000573559 ABCA9Q8IUA7 1624 aa33.89■■■■□ 3.02
ABR-221ENST00000573559 CCDC18Q5T9S5 1454 aa33.88■■■■□ 3.01
ABR-221ENST00000573559 TEX14Q8IWB6 1497 aa33.88■■■■□ 3.01
ABR-221ENST00000573559 KDM6BO15054 1643 aa33.86■■■■□ 3.01
ABR-221ENST00000573559 CDK11AQ9UQ88 783 aaPredicted RBP33.83■■■■□ 3.01
ABR-221ENST00000573559 MAGI3Q5TCQ9 1506 aa33.82■■■■□ 3
ABR-221ENST00000573559 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.76■■■■□ 3
ABR-221ENST00000573559 TTC37Q6PGP7 1564 aa33.76■■■□□ 2.99
ABR-221ENST00000573559 TROQ12816 1431 aaPredicted RBP33.75■■■□□ 2.99
ABR-221ENST00000573559 KIF14Q15058 1648 aa33.73■■■□□ 2.99
ABR-221ENST00000573559 VPS8Q8N3P4 1428 aa33.68■■■□□ 2.98
ABR-221ENST00000573559 COL17A1Q9UMD9 1497 aaPredicted RBP33.62■■■□□ 2.97
ABR-221ENST00000573559 MYO5CQ9NQX4 1742 aa33.61■■■□□ 2.97
ABR-221ENST00000573559 NEO1Q92859 1461 aa33.58■■■□□ 2.97
ABR-221ENST00000573559 CFAP74Q9C0B2 1584 aa33.58■■■□□ 2.97
ABR-221ENST00000573559 FANCAO15360 1455 aa33.55■■■□□ 2.96
ABR-221ENST00000573559 MTUS2Q5JR59 1369 aa33.54■■■□□ 2.96
ABR-221ENST00000573559 PHLDB1Q86UU1 1377 aa33.53■■■□□ 2.96
ABR-221ENST00000573559 PLCH2O75038 1416 aa33.52■■■□□ 2.96
ABR-221ENST00000573559 ARAP3Q8WWN8 1544 aa33.51■■■□□ 2.95
ABR-221ENST00000573559 TIAM1Q13009 1591 aa33.5■■■□□ 2.95
ABR-221ENST00000573559 EHBP1L1Q8N3D4 1523 aa33.49■■■□□ 2.95
ABR-221ENST00000573559 AKNAQ7Z591 1439 aa33.46■■■□□ 2.95
ABR-221ENST00000573559 ARHGAP5Q13017 1502 aa33.46■■■□□ 2.95
ABR-221ENST00000573559 PREX2Q70Z35 1606 aa33.45■■■□□ 2.95
ABR-221ENST00000573559 CDC42BPBQ9Y5S2 1711 aa33.42■■■□□ 2.94
ABR-221ENST00000573559 CDC42BPAQ5VT25 1732 aa33.42■■■□□ 2.94
ABR-221ENST00000573559 EFCAB2Q5VUJ9 269 aa33.4■■■□□ 2.94
ABR-221ENST00000573559 ADGRL1O94910 1474 aa33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms