RNA–Protein interactions for RNA: ENST00000572650.1

ABR-219, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-219ENST00000572650 IGF1RP08069 1367 aa30.69■■■□□ 2.5
ABR-219ENST00000572650 KIF13AQ9H1H9 1805 aa30.69■■■□□ 2.5
ABR-219ENST00000572650 KIAA0586Q9BVV6 1533 aa30.65■■■□□ 2.5
ABR-219ENST00000572650 KIF27Q86VH2 1401 aa30.64■■■□□ 2.49
ABR-219ENST00000572650 MAPKBP1O60336 1514 aa30.6■■■□□ 2.49
ABR-219ENST00000572650 ABCC10Q5T3U5 1492 aa30.6■■■□□ 2.49
ABR-219ENST00000572650 CUL7Q14999 1698 aa30.59■■■□□ 2.49
ABR-219ENST00000572650 ADCY10Q96PN6 1610 aa30.56■■■□□ 2.48
ABR-219ENST00000572650 NPM1P06748 294 aaKnown RBP eCLIP30.55■■■□□ 2.48
ABR-219ENST00000572650 FAM69CQ0P6D2 419 aa30.52■■■□□ 2.48
ABR-219ENST00000572650 DIP2BQ9P265 1576 aa30.49■■■□□ 2.47
ABR-219ENST00000572650 CARMIL1Q5VZK9 1371 aa30.45■■■□□ 2.47
ABR-219ENST00000572650 PTPRGP23470 1445 aa30.38■■■□□ 2.45
ABR-219ENST00000572650 TNIKQ9UKE5 1360 aa30.32■■■□□ 2.44
ABR-219ENST00000572650 CARMIL2Q6F5E8 1435 aa30.31■■■□□ 2.44
ABR-219ENST00000572650 IQGAP2Q13576 1575 aa30.28■■■□□ 2.44
ABR-219ENST00000572650 ABCC2Q92887 1545 aa30.26■■■□□ 2.43
ABR-219ENST00000572650 KDM6BO15054 1643 aa30.23■■■□□ 2.43
ABR-219ENST00000572650 UHRF1BP1LA0JNW5 1464 aa30.22■■■□□ 2.43
ABR-219ENST00000572650 DISP1Q96F81 1524 aa30.2■■■□□ 2.42
ABR-219ENST00000572650 PLB1Q6P1J6 1458 aa30.17■■■□□ 2.42
ABR-219ENST00000572650 TSPOAP1O95153 1857 aa30.16■■■□□ 2.42
ABR-219ENST00000572650 ASXL2Q76L83 1435 aa30.16■■■□□ 2.42
ABR-219ENST00000572650 TTBK1Q5TCY1 1321 aaPredicted RBP30.16■■■□□ 2.42
ABR-219ENST00000572650 UACAQ9BZF9 1416 aa30.15■■■□□ 2.42
ABR-219ENST00000572650 RAPGEF2Q9Y4G8 1499 aa30.15■■■□□ 2.42
ABR-219ENST00000572650 GLI2P10070 1586 aa30.15■■■□□ 2.42
ABR-219ENST00000572650 UGGT2Q9NYU1 1516 aa30.13■■■□□ 2.41
ABR-219ENST00000572650 KDM4FA0A1W2PPD8 638 aa30.09■■■□□ 2.41
ABR-219ENST00000572650 KDM5BQ9UGL1 1544 aa30.07■■■□□ 2.4
ABR-219ENST00000572650 PPRC1Q5VV67 1664 aaKnown RBP30.06■■■□□ 2.4
ABR-219ENST00000572650 KIAA0556O60303 1618 aa30.02■■■□□ 2.4
ABR-219ENST00000572650 EPRSP07814 1512 aaKnown RBP30■■■□□ 2.39
ABR-219ENST00000572650 ZCCHC11Q5TAX3 1644 aaKnown RBP29.94■■■□□ 2.38
ABR-219ENST00000572650 MAP3K4Q9Y6R4 1608 aa29.93■■■□□ 2.38
ABR-219ENST00000572650 COL17A1Q9UMD9 1497 aaPredicted RBP29.9■■■□□ 2.38
ABR-219ENST00000572650 TEX14Q8IWB6 1497 aa29.86■■■□□ 2.37
ABR-219ENST00000572650 CTTNBP2Q8WZ74 1663 aa29.85■■■□□ 2.37
ABR-219ENST00000572650 GOLGA3Q08378 1498 aa29.84■■■□□ 2.37
ABR-219ENST00000572650 WDR7Q9Y4E6 1490 aa29.84■■■□□ 2.37
ABR-219ENST00000572650 PRXQ9BXM0 1461 aa29.83■■■□□ 2.37
ABR-219ENST00000572650 ABCA8O94911 1581 aa29.79■■■□□ 2.36
ABR-219ENST00000572650 ADGRL1O94910 1474 aa29.75■■■□□ 2.35
ABR-219ENST00000572650 MAGI3Q5TCQ9 1506 aa29.71■■■□□ 2.35
ABR-219ENST00000572650 CD109Q6YHK3 1445 aa29.67■■■□□ 2.34
ABR-219ENST00000572650 CFAP43Q8NDM7 1665 aa29.66■■■□□ 2.34
ABR-219ENST00000572650 KCNH8Q96L42 1107 aa29.61■■■□□ 2.33
ABR-219ENST00000572650 ATP10BO94823 1461 aa29.54■■■□□ 2.32
ABR-219ENST00000572650 FAM9AQ8IZU1 332 aaPredicted RBP29.5■■■□□ 2.31
ABR-219ENST00000572650 CSRNP3Q8WYN3 585 aa29.5■■■□□ 2.31
ABR-219ENST00000572650 SAMD9Q5K651 1589 aa29.49■■■□□ 2.31
ABR-219ENST00000572650 P3H3Q8IVL6 736 aa29.48■■■□□ 2.31
ABR-219ENST00000572650 ARAP3Q8WWN8 1544 aa29.48■■■□□ 2.31
ABR-219ENST00000572650 ABCA9Q8IUA7 1624 aa29.42■■■□□ 2.3
ABR-219ENST00000572650 PHLDB1Q86UU1 1377 aa29.41■■■□□ 2.3
ABR-219ENST00000572650 ARID3CA6NKF2 412 aa29.41■■■□□ 2.3
ABR-219ENST00000572650 HECW2Q9P2P5 1572 aa29.4■■■□□ 2.3
ABR-219ENST00000572650 RAPGEF6Q8TEU7 1601 aa29.38■■■□□ 2.29
ABR-219ENST00000572650 EEA1Q15075 1411 aa29.36■■■□□ 2.29
ABR-219ENST00000572650 KIF21BO75037 1637 aa29.34■■■□□ 2.29
ABR-219ENST00000572650 ILDR1Q86SU0 546 aaPredicted RBP29.33■■■□□ 2.29
ABR-219ENST00000572650 NUP153P49790 1475 aaKnown RBP29.31■■■□□ 2.28
ABR-219ENST00000572650 NEO1Q92859 1461 aa29.31■■■□□ 2.28
ABR-219ENST00000572650 FHOD3Q2V2M9 1422 aa29.24■■■□□ 2.27
ABR-219ENST00000572650 RAPGEF3O95398 923 aa29.23■■■□□ 2.27
ABR-219ENST00000572650 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.22■■■□□ 2.27
ABR-219ENST00000572650 HNRNPUL2Q1KMD3 747 aaKnown RBP29.22■■■□□ 2.27
ABR-219ENST00000572650 FRMPD1Q5SYB0 1578 aa29.2■■■□□ 2.26
ABR-219ENST00000572650 ADAMTSL3P82987 1691 aa29.18■■■□□ 2.26
ABR-219ENST00000572650 PLEKHD1A6NEE1 506 aa29.14■■■□□ 2.26
ABR-219ENST00000572650 RANGAP1P46060 587 aaPredicted RBP29.14■■■□□ 2.26
ABR-219ENST00000572650 EFCAB5A4FU69 1503 aa29.14■■■□□ 2.25
ABR-219ENST00000572650 PTPRMP28827 1452 aa29.13■■■□□ 2.25
ABR-219ENST00000572650 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.08■■■□□ 2.25
ABR-219ENST00000572650 BCORL1Q5H9F3 1711 aa29.08■■■□□ 2.25
ABR-219ENST00000572650 DENND4BO75064 1496 aaPredicted RBP29.07■■■□□ 2.24
ABR-219ENST00000572650 AKNAQ7Z591 1439 aa29.07■■■□□ 2.24
ABR-219ENST00000572650 FANCAO15360 1455 aa29.04■■■□□ 2.24
ABR-219ENST00000572650 RICTORQ6R327 1708 aa29.04■■■□□ 2.24
ABR-219ENST00000572650 ARHGEF40Q8TER5 1519 aa29.04■■■□□ 2.24
ABR-219ENST00000572650 CFAP74Q9C0B2 1584 aa29.03■■■□□ 2.24
ABR-219ENST00000572650 TTC37Q6PGP7 1564 aa29.01■■■□□ 2.23
ABR-219ENST00000572650 MADDQ8WXG6 1647 aa28.99■■■□□ 2.23
ABR-219ENST00000572650 ARID4BQ4LE39 1312 aaPredicted RBP28.98■■■□□ 2.23
ABR-219ENST00000572650 ZMYM4Q5VZL5 1548 aa28.98■■■□□ 2.23
ABR-219ENST00000572650 CDK13Q14004 1512 aaKnown RBP28.96■■■□□ 2.23
ABR-219ENST00000572650 MAGI2Q86UL8 1455 aa28.92■■■□□ 2.22
ABR-219ENST00000572650 PLCH2O75038 1416 aa28.92■■■□□ 2.22
ABR-219ENST00000572650 PCF11O94913 1555 aaKnown RBP28.9■■■□□ 2.22
ABR-219ENST00000572650 LMTK3Q96Q04 1460 aa28.89■■■□□ 2.22
ABR-219ENST00000572650 FMN1Q68DA7 1419 aa28.88■■■□□ 2.21
ABR-219ENST00000572650 YEATS2Q9ULM3 1422 aa28.88■■■□□ 2.21
ABR-219ENST00000572650 ZFYVE16Q7Z3T8 1539 aa28.88■■■□□ 2.21
ABR-219ENST00000572650 POGZQ7Z3K3 1410 aa28.86■■■□□ 2.21
ABR-219ENST00000572650 ARHGAP35Q9NRY4 1499 aa28.85■■■□□ 2.21
ABR-219ENST00000572650 RIMS1Q86UR5 1692 aaKnown RBP28.85■■■□□ 2.21
ABR-219ENST00000572650 HECW1Q76N89 1606 aa28.84■■■□□ 2.21
ABR-219ENST00000572650 SIGLEC1Q9BZZ2 1709 aa28.84■■■□□ 2.21
ABR-219ENST00000572650 SCAPERQ9BY12 1400 aa28.84■■■□□ 2.21
ABR-219ENST00000572650 UBTFP17480 764 aaKnown RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms