RNA–Protein interactions for RNA: ENST00000572650.1

ABR-219, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-219ENST00000572650 NISCHQ9Y2I1 1504 aa43.97■■■■■ 4.63
ABR-219ENST00000572650 ABCC9O60706 1549 aa39.62■■■■□ 3.93
ABR-219ENST00000572650 CCDC180Q9P1Z9 1646 aa39.51■■■■□ 3.91
ABR-219ENST00000572650 RB1CC1Q8TDY2 1594 aa37.68■■■■□ 3.62
ABR-219ENST00000572650 NACADO15069 1562 aa37.42■■■■□ 3.58
ABR-219ENST00000572650 DNAJC5BQ9UF47 199 aa37.39■■■■□ 3.58
ABR-219ENST00000572650 DCAF8L2P0C7V8 631 aa37.02■■■■□ 3.52
ABR-219ENST00000572650 MYO15BQ96JP2 1530 aa36.93■■■■□ 3.5
ABR-219ENST00000572650 PABPN1Q86U42 306 aaKnown RBP eCLIP36.86■■■■□ 3.49
ABR-219ENST00000572650 UNC13AQ9UPW8 1703 aa36.78■■■■□ 3.48
ABR-219ENST00000572650 BICRAQ9NZM4 1560 aa36.63■■■■□ 3.45
ABR-219ENST00000572650 ZCCHC6Q5VYS8 1495 aaKnown RBP36.41■■■■□ 3.42
ABR-219ENST00000572650 DCAF1Q9Y4B6 1507 aa36.37■■■■□ 3.41
ABR-219ENST00000572650 SHROOM4Q9ULL8 1493 aa36.18■■■■□ 3.38
ABR-219ENST00000572650 SCRIBQ14160 1630 aa35.92■■■■□ 3.34
ABR-219ENST00000572650 CC2D2AQ9P2K1 1620 aa35.81■■■■□ 3.32
ABR-219ENST00000572650 CECR2Q9BXF3 1484 aa35.74■■■■□ 3.31
ABR-219ENST00000572650 EIF4G1Q04637 1599 aaKnown RBP35.72■■■■□ 3.31
ABR-219ENST00000572650 NCAPD3P42695 1498 aa34.58■■■■□ 3.13
ABR-219ENST00000572650 DNAJC5Q9H3Z4 198 aa34.48■■■■□ 3.11
ABR-219ENST00000572650 ATAD2BQ9ULI0 1458 aa34.41■■■■□ 3.1
ABR-219ENST00000572650 SMARCA4P51532 1647 aa34.3■■■■□ 3.08
ABR-219ENST00000572650 CUX2O14529 1486 aa34.3■■■■□ 3.08
ABR-219ENST00000572650 SMARCA2P51531 1590 aa34.29■■■■□ 3.08
ABR-219ENST00000572650 HMGXB3Q12766 1538 aa34.28■■■■□ 3.08
ABR-219ENST00000572650 ERCC6Q03468 1493 aa34.2■■■■□ 3.07
ABR-219ENST00000572650 BAZ1AQ9NRL2 1556 aaPredicted RBP34.12■■■■□ 3.05
ABR-219ENST00000572650 PEG3Q9GZU2 1588 aa34.04■■■■□ 3.04
ABR-219ENST00000572650 BAZ1BQ9UIG0 1483 aaKnown RBP34.02■■■■□ 3.04
ABR-219ENST00000572650 NESP48681 1621 aa34.01■■■■□ 3.03
ABR-219ENST00000572650 MROH2BQ7Z745 1585 aa33.85■■■■□ 3.01
ABR-219ENST00000572650 LAMC3Q9Y6N6 1575 aa33.78■■■■□ 3
ABR-219ENST00000572650 THOC2Q8NI27 1593 aaKnown RBP33.72■■■□□ 2.99
ABR-219ENST00000572650 PDS5BQ9NTI5 1447 aa33.59■■■□□ 2.97
ABR-219ENST00000572650 KIF21AQ7Z4S6 1674 aa33.53■■■□□ 2.96
ABR-219ENST00000572650 CADPSQ9ULU8 1353 aa33.49■■■□□ 2.95
ABR-219ENST00000572650 WIZO95785 1651 aa33.39■■■□□ 2.94
ABR-219ENST00000572650 MRC2Q9UBG0 1479 aa33.3■■■□□ 2.92
ABR-219ENST00000572650 WDR62O43379 1518 aa33.25■■■□□ 2.91
ABR-219ENST00000572650 CEP164Q9UPV0 1460 aa33.12■■■□□ 2.89
ABR-219ENST00000572650 RSF1Q96T23 1441 aaPredicted RBP33.11■■■□□ 2.89
ABR-219ENST00000572650 CFTRP13569 1480 aa33.09■■■□□ 2.89
ABR-219ENST00000572650 FANCD2Q9BXW9 1451 aa33.07■■■□□ 2.88
ABR-219ENST00000572650 TOP2AP11388 1531 aaKnown RBP33.01■■■□□ 2.87
ABR-219ENST00000572650 URB2Q14146 1524 aaKnown RBP32.83■■■□□ 2.85
ABR-219ENST00000572650 TRIM41Q8WV44 630 aa32.76■■■□□ 2.83
ABR-219ENST00000572650 OSCARQ8IYS5 282 aa32.67■■■□□ 2.82
ABR-219ENST00000572650 PRDM2Q13029 1718 aa32.65■■■□□ 2.82
ABR-219ENST00000572650 CCDC88BA6NC98 1476 aa32.63■■■□□ 2.81
ABR-219ENST00000572650 IFT140Q96RY7 1462 aa32.5■■■□□ 2.79
ABR-219ENST00000572650 TOPBP1Q92547 1522 aa32.44■■■□□ 2.78
ABR-219ENST00000572650 ZNF608Q9ULD9 1512 aaPredicted RBP32.43■■■□□ 2.78
ABR-219ENST00000572650 ABCC8Q09428 1581 aa32.38■■■□□ 2.77
ABR-219ENST00000572650 DNMBPQ6XZF7 1577 aa32.3■■■□□ 2.76
ABR-219ENST00000572650 RIMBP3CA6NJZ7 1639 aa32.24■■■□□ 2.75
ABR-219ENST00000572650 RIMBP3BA6NNM3 1639 aa32.24■■■□□ 2.75
ABR-219ENST00000572650 RIMBP3Q9UFD9 1639 aa32.24■■■□□ 2.75
ABR-219ENST00000572650 EIF4G3O43432 1585 aaKnown RBP32.23■■■□□ 2.75
ABR-219ENST00000572650 TARBP1Q13395 1621 aaKnown RBP32.17■■■□□ 2.74
ABR-219ENST00000572650 ARHGEF11O15085 1522 aa32.14■■■□□ 2.74
ABR-219ENST00000572650 AQRO60306 1485 aaKnown RBP eCLIP32.11■■■□□ 2.73
ABR-219ENST00000572650 POLA1P09884 1462 aaPredicted RBP32.1■■■□□ 2.73
ABR-219ENST00000572650 CHD1O14646 1710 aa31.98■■■□□ 2.71
ABR-219ENST00000572650 RAD54L2Q9Y4B4 1467 aa31.96■■■□□ 2.71
ABR-219ENST00000572650 SOGA1O94964 1423 aa31.93■■■□□ 2.7
ABR-219ENST00000572650 TDRD9Q8NDG6 1382 aaKnown RBP31.88■■■□□ 2.69
ABR-219ENST00000572650 WDR97A6NE52 1622 aa31.87■■■□□ 2.69
ABR-219ENST00000572650 CYB5RLQ6IPT4 315 aa31.87■■■□□ 2.69
ABR-219ENST00000572650 FGD5Q6ZNL6 1462 aa31.85■■■□□ 2.69
ABR-219ENST00000572650 FBLN2P98095 1184 aa31.85■■■□□ 2.69
ABR-219ENST00000572650 ARAP1Q96P48 1450 aa31.83■■■□□ 2.69
ABR-219ENST00000572650 CUX1P39880 1505 aa31.81■■■□□ 2.68
ABR-219ENST00000572650 SNAPC4Q5SXM2 1469 aa31.78■■■□□ 2.68
ABR-219ENST00000572650 MAGI1Q96QZ7 1491 aaPredicted RBP31.72■■■□□ 2.67
ABR-219ENST00000572650 CLASP1Q7Z460 1538 aa31.7■■■□□ 2.67
ABR-219ENST00000572650 GRIN2BQ13224 1484 aa31.69■■■□□ 2.66
ABR-219ENST00000572650 CHMP7Q8WUX9 453 aaPredicted RBP31.66■■■□□ 2.66
ABR-219ENST00000572650 SYNJ1O43426 1573 aa31.63■■■□□ 2.65
ABR-219ENST00000572650 SYNJ2O15056 1496 aa31.61■■■□□ 2.65
ABR-219ENST00000572650 GAPVD1Q14C86 1478 aa31.55■■■□□ 2.64
ABR-219ENST00000572650 TRHP20396 242 aaPredicted RBP31.53■■■□□ 2.64
ABR-219ENST00000572650 ABCA10Q8WWZ4 1543 aa31.53■■■□□ 2.64
ABR-219ENST00000572650 PBRM1Q86U86 1689 aa31.49■■■□□ 2.63
ABR-219ENST00000572650 ABCA5Q8WWZ7 1642 aa31.47■■■□□ 2.63
ABR-219ENST00000572650 SUPT5HO00267 1087 aaKnown RBP31.38■■■□□ 2.61
ABR-219ENST00000572650 WRNQ14191 1432 aaPredicted RBP eCLIP31.33■■■□□ 2.61
ABR-219ENST00000572650 GRIN2AQ12879 1464 aa31.28■■■□□ 2.6
ABR-219ENST00000572650 TOP2BQ02880 1626 aa31.26■■■□□ 2.59
ABR-219ENST00000572650 BIVM-ERCC5R4GMW8 1640 aa31.26■■■□□ 2.59
ABR-219ENST00000572650 ADAMTS12P58397 1594 aa31.23■■■□□ 2.59
ABR-219ENST00000572650 NUP160Q12769 1436 aa31.23■■■□□ 2.59
ABR-219ENST00000572650 CEP170Q5SW79 1584 aa31.17■■■□□ 2.58
ABR-219ENST00000572650 FHAD1B1AJZ9 1412 aa31.16■■■□□ 2.58
ABR-219ENST00000572650 ERCC6L2Q5T890 1561 aa31.15■■■□□ 2.58
ABR-219ENST00000572650 ERICH3Q5RHP9 1530 aa31.12■■■□□ 2.57
ABR-219ENST00000572650 SHROOM2Q13796 1616 aa31.09■■■□□ 2.57
ABR-219ENST00000572650 PRG4Q92954 1404 aaPredicted RBP30.88■■■□□ 2.53
ABR-219ENST00000572650 JPH4Q96JJ6 628 aa30.87■■■□□ 2.53
ABR-219ENST00000572650 RUSC2Q8N2Y8 1516 aa30.79■■■□□ 2.52
ABR-219ENST00000572650 AEBP2Q6ZN18 517 aaPredicted RBP30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms