RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 KIAA0586Q9BVV6 1533 aa27.03■■□□□ 1.92
LITAF-210ENST00000571976 JPH4Q96JJ6 628 aa27.02■■□□□ 1.92
LITAF-210ENST00000571976 SHROOM2Q13796 1616 aa27.01■■□□□ 1.91
LITAF-210ENST00000571976 PRXQ9BXM0 1461 aa27■■□□□ 1.91
LITAF-210ENST00000571976 CYB5RLQ6IPT4 315 aa26.98■■□□□ 1.91
LITAF-210ENST00000571976 ARAP1Q96P48 1450 aa26.98■■□□□ 1.91
LITAF-210ENST00000571976 FAM9AQ8IZU1 332 aaPredicted RBP26.93■■□□□ 1.9
LITAF-210ENST00000571976 PRG4Q92954 1404 aaPredicted RBP26.92■■□□□ 1.9
LITAF-210ENST00000571976 ERCC6L2Q5T890 1561 aa26.9■■□□□ 1.9
LITAF-210ENST00000571976 IQGAP2Q13576 1575 aa26.86■■□□□ 1.89
LITAF-210ENST00000571976 CTTNBP2Q8WZ74 1663 aa26.77■■□□□ 1.88
LITAF-210ENST00000571976 CARMIL2Q6F5E8 1435 aa26.75■■□□□ 1.87
LITAF-210ENST00000571976 KIF21BO75037 1637 aa26.73■■□□□ 1.87
LITAF-210ENST00000571976 UGGT2Q9NYU1 1516 aa26.73■■□□□ 1.87
LITAF-210ENST00000571976 DISP1Q96F81 1524 aa26.67■■□□□ 1.86
LITAF-210ENST00000571976 TNIKQ9UKE5 1360 aa26.65■■□□□ 1.86
LITAF-210ENST00000571976 PTPRGP23470 1445 aa26.64■■□□□ 1.85
LITAF-210ENST00000571976 GOLGA3Q08378 1498 aa26.62■■□□□ 1.85
LITAF-210ENST00000571976 KIAA0556O60303 1618 aa26.59■■□□□ 1.85
LITAF-210ENST00000571976 TTBK1Q5TCY1 1321 aaPredicted RBP26.57■■□□□ 1.84
LITAF-210ENST00000571976 UBTFP17480 764 aaKnown RBP26.56■■□□□ 1.84
LITAF-210ENST00000571976 EHMT2Q96KQ7 1210 aa26.55■■□□□ 1.84
LITAF-210ENST00000571976 ADCY10Q96PN6 1610 aa26.47■■□□□ 1.83
LITAF-210ENST00000571976 NPM1P06748 294 aaKnown RBP eCLIP26.47■■□□□ 1.83
LITAF-210ENST00000571976 RANGAP1P46060 587 aaPredicted RBP26.45■■□□□ 1.82
LITAF-210ENST00000571976 UACAQ9BZF9 1416 aa26.45■■□□□ 1.82
LITAF-210ENST00000571976 SAMD9Q5K651 1589 aa26.45■■□□□ 1.82
LITAF-210ENST00000571976 P3H3Q8IVL6 736 aa26.44■■□□□ 1.82
LITAF-210ENST00000571976 UHRF1BP1LA0JNW5 1464 aa26.42■■□□□ 1.82
LITAF-210ENST00000571976 TRHP20396 242 aaPredicted RBP26.41■■□□□ 1.82
LITAF-210ENST00000571976 EFCAB5A4FU69 1503 aa26.37■■□□□ 1.81
LITAF-210ENST00000571976 ABCC2Q92887 1545 aa26.37■■□□□ 1.81
LITAF-210ENST00000571976 PLB1Q6P1J6 1458 aa26.34■■□□□ 1.81
LITAF-210ENST00000571976 MAPKBP1O60336 1514 aa26.32■■□□□ 1.8
LITAF-210ENST00000571976 ABCA8O94911 1581 aa26.31■■□□□ 1.8
LITAF-210ENST00000571976 FHOD3Q2V2M9 1422 aa26.31■■□□□ 1.8
LITAF-210ENST00000571976 KDM5BQ9UGL1 1544 aa26.29■■□□□ 1.8
LITAF-210ENST00000571976 ARHGAP35Q9NRY4 1499 aa26.23■■□□□ 1.79
LITAF-210ENST00000571976 ZCCHC11Q5TAX3 1644 aaKnown RBP26.2■■□□□ 1.78
LITAF-210ENST00000571976 ABCC10Q5T3U5 1492 aa26.19■■□□□ 1.78
LITAF-210ENST00000571976 ASXL2Q76L83 1435 aa26.19■■□□□ 1.78
LITAF-210ENST00000571976 RAPGEF6Q8TEU7 1601 aa26.18■■□□□ 1.78
LITAF-210ENST00000571976 FAM69CQ0P6D2 419 aa26.15■■□□□ 1.78
LITAF-210ENST00000571976 FMN1Q68DA7 1419 aa26.14■■□□□ 1.78
LITAF-210ENST00000571976 KIF13AQ9H1H9 1805 aa26.13■■□□□ 1.77
LITAF-210ENST00000571976 CLIP1P30622 1438 aa26.13■■□□□ 1.77
LITAF-210ENST00000571976 DIP2BQ9P265 1576 aa26.12■■□□□ 1.77
LITAF-210ENST00000571976 LOC105371045A0A1W2PR82 267 aa26.12■■□□□ 1.77
LITAF-210ENST00000571976 ATP10BO94823 1461 aa26.11■■□□□ 1.77
LITAF-210ENST00000571976 ARID3CA6NKF2 412 aa26.1■■□□□ 1.77
LITAF-210ENST00000571976 NUP153P49790 1475 aaKnown RBP26.1■■□□□ 1.77
LITAF-210ENST00000571976 WDR7Q9Y4E6 1490 aa26.07■■□□□ 1.76
LITAF-210ENST00000571976 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.04■■□□□ 1.76
LITAF-210ENST00000571976 HNRNPUL2Q1KMD3 747 aaKnown RBP26.04■■□□□ 1.76
LITAF-210ENST00000571976 EPRSP07814 1512 aaKnown RBP26.03■■□□□ 1.76
LITAF-210ENST00000571976 GLI2P10070 1586 aa26.02■■□□□ 1.76
LITAF-210ENST00000571976 CEP162Q5TB80 1403 aa26.01■■□□□ 1.75
LITAF-210ENST00000571976 ATP1B4Q9UN42 357 aaPredicted RBP26■■□□□ 1.75
LITAF-210ENST00000571976 KCNH8Q96L42 1107 aa25.98■■□□□ 1.75
LITAF-210ENST00000571976 HECW1Q76N89 1606 aa25.98■■□□□ 1.75
LITAF-210ENST00000571976 PLEKHD1A6NEE1 506 aa25.95■■□□□ 1.74
LITAF-210ENST00000571976 CASKIN1Q8WXD9 1431 aa25.94■■□□□ 1.74
LITAF-210ENST00000571976 CDK13Q14004 1512 aaKnown RBP25.91■■□□□ 1.74
LITAF-210ENST00000571976 MAP3K4Q9Y6R4 1608 aa25.88■■□□□ 1.73
LITAF-210ENST00000571976 TSPOAP1O95153 1857 aa25.88■■□□□ 1.73
LITAF-210ENST00000571976 PCF11O94913 1555 aaKnown RBP25.88■■□□□ 1.73
LITAF-210ENST00000571976 FYCO1Q9BQS8 1478 aa25.87■■□□□ 1.73
LITAF-210ENST00000571976 CDK11AQ9UQ88 783 aaPredicted RBP25.87■■□□□ 1.73
LITAF-210ENST00000571976 CD109Q6YHK3 1445 aa25.84■■□□□ 1.73
LITAF-210ENST00000571976 CFAP43Q8NDM7 1665 aa25.83■■□□□ 1.73
LITAF-210ENST00000571976 CCDC18Q5T9S5 1454 aa25.83■■□□□ 1.73
LITAF-210ENST00000571976 PPRC1Q5VV67 1664 aaKnown RBP25.8■■□□□ 1.72
LITAF-210ENST00000571976 LRRIQ1Q96JM4 1722 aa25.8■■□□□ 1.72
LITAF-210ENST00000571976 TEX14Q8IWB6 1497 aa25.79■■□□□ 1.72
LITAF-210ENST00000571976 ABCA9Q8IUA7 1624 aa25.79■■□□□ 1.72
LITAF-210ENST00000571976 MAGI3Q5TCQ9 1506 aa25.78■■□□□ 1.72
LITAF-210ENST00000571976 TROQ12816 1431 aaPredicted RBP25.73■■□□□ 1.71
LITAF-210ENST00000571976 VPS8Q8N3P4 1428 aa25.71■■□□□ 1.71
LITAF-210ENST00000571976 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.7■■□□□ 1.7
LITAF-210ENST00000571976 KDM6BO15054 1643 aa25.69■■□□□ 1.7
LITAF-210ENST00000571976 KIF14Q15058 1648 aa25.65■■□□□ 1.7
LITAF-210ENST00000571976 TTC37Q6PGP7 1564 aa25.65■■□□□ 1.7
LITAF-210ENST00000571976 PHLDB1Q86UU1 1377 aa25.63■■□□□ 1.69
LITAF-210ENST00000571976 NEO1Q92859 1461 aa25.6■■□□□ 1.69
LITAF-210ENST00000571976 COL17A1Q9UMD9 1497 aaPredicted RBP25.6■■□□□ 1.69
LITAF-210ENST00000571976 PLCH2O75038 1416 aa25.58■■□□□ 1.69
LITAF-210ENST00000571976 MTUS2Q5JR59 1369 aa25.57■■□□□ 1.68
LITAF-210ENST00000571976 ARAP3Q8WWN8 1544 aa25.56■■□□□ 1.68
LITAF-210ENST00000571976 FANCAO15360 1455 aa25.55■■□□□ 1.68
LITAF-210ENST00000571976 MYO5CQ9NQX4 1742 aa25.53■■□□□ 1.68
LITAF-210ENST00000571976 CFAP74Q9C0B2 1584 aa25.52■■□□□ 1.68
LITAF-210ENST00000571976 TIAM1Q13009 1591 aa25.52■■□□□ 1.68
LITAF-210ENST00000571976 EFCAB2Q5VUJ9 269 aa25.51■■□□□ 1.67
LITAF-210ENST00000571976 AKNAQ7Z591 1439 aa25.51■■□□□ 1.67
LITAF-210ENST00000571976 EHBP1L1Q8N3D4 1523 aa25.5■■□□□ 1.67
LITAF-210ENST00000571976 MAP3K1Q13233 1512 aa25.49■■□□□ 1.67
LITAF-210ENST00000571976 APLP2Q06481 763 aa25.45■■□□□ 1.66
LITAF-210ENST00000571976 ARHGAP5Q13017 1502 aa25.45■■□□□ 1.66
LITAF-210ENST00000571976 RAPGEF3O95398 923 aa25.43■■□□□ 1.66
LITAF-210ENST00000571976 PREX2Q70Z35 1606 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms