RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 FAM69CQ0P6D2 419 aa20.44■□□□□ 0.86
CHMP6-202ENST00000571457 ABCC10Q5T3U5 1492 aa20.42■□□□□ 0.86
CHMP6-202ENST00000571457 SUPT5HO00267 1087 aaKnown RBP20.39■□□□□ 0.85
CHMP6-202ENST00000571457 MAPKBP1O60336 1514 aa20.37■□□□□ 0.85
CHMP6-202ENST00000571457 RUSC2Q8N2Y8 1516 aa20.33■□□□□ 0.85
CHMP6-202ENST00000571457 DIP2BQ9P265 1576 aa20.33■□□□□ 0.84
CHMP6-202ENST00000571457 ADCY10Q96PN6 1610 aa20.28■□□□□ 0.84
CHMP6-202ENST00000571457 KDM6BO15054 1643 aa20.27■□□□□ 0.84
CHMP6-202ENST00000571457 KDM4FA0A1W2PPD8 638 aa20.25■□□□□ 0.83
CHMP6-202ENST00000571457 KIAA0586Q9BVV6 1533 aa20.23■□□□□ 0.83
CHMP6-202ENST00000571457 TSPOAP1O95153 1857 aa20.19■□□□□ 0.82
CHMP6-202ENST00000571457 PTPRGP23470 1445 aa20.15■□□□□ 0.82
CHMP6-202ENST00000571457 IGF1RP08069 1367 aa20.14■□□□□ 0.81
CHMP6-202ENST00000571457 CUL7Q14999 1698 aa20.13■□□□□ 0.81
CHMP6-202ENST00000571457 KIF27Q86VH2 1401 aa20.12■□□□□ 0.81
CHMP6-202ENST00000571457 ILDR1Q86SU0 546 aaPredicted RBP20.09■□□□□ 0.81
CHMP6-202ENST00000571457 CARMIL2Q6F5E8 1435 aa20.09■□□□□ 0.81
CHMP6-202ENST00000571457 ABCC2Q92887 1545 aa20.08■□□□□ 0.81
CHMP6-202ENST00000571457 TNIKQ9UKE5 1360 aa20.08■□□□□ 0.8
CHMP6-202ENST00000571457 PLB1Q6P1J6 1458 aa20.07■□□□□ 0.8
CHMP6-202ENST00000571457 TTBK1Q5TCY1 1321 aaPredicted RBP20.05■□□□□ 0.8
CHMP6-202ENST00000571457 ASXL2Q76L83 1435 aa20.04■□□□□ 0.8
CHMP6-202ENST00000571457 GLI2P10070 1586 aa20.04■□□□□ 0.8
CHMP6-202ENST00000571457 CARMIL1Q5VZK9 1371 aa20.01■□□□□ 0.79
CHMP6-202ENST00000571457 ADGRL1O94910 1474 aa20■□□□□ 0.79
CHMP6-202ENST00000571457 UHRF1BP1LA0JNW5 1464 aa19.99■□□□□ 0.79
CHMP6-202ENST00000571457 PPRC1Q5VV67 1664 aaKnown RBP19.98■□□□□ 0.79
CHMP6-202ENST00000571457 IQGAP2Q13576 1575 aa19.96■□□□□ 0.79
CHMP6-202ENST00000571457 UACAQ9BZF9 1416 aa19.96■□□□□ 0.79
CHMP6-202ENST00000571457 TEX14Q8IWB6 1497 aa19.93■□□□□ 0.78
CHMP6-202ENST00000571457 EPRSP07814 1512 aaKnown RBP19.92■□□□□ 0.78
CHMP6-202ENST00000571457 COL17A1Q9UMD9 1497 aaPredicted RBP19.9■□□□□ 0.78
CHMP6-202ENST00000571457 KDM5BQ9UGL1 1544 aa19.9■□□□□ 0.78
CHMP6-202ENST00000571457 MAP3K4Q9Y6R4 1608 aa19.88■□□□□ 0.77
CHMP6-202ENST00000571457 DISP1Q96F81 1524 aa19.88■□□□□ 0.77
CHMP6-202ENST00000571457 HECW2Q9P2P5 1572 aa19.85■□□□□ 0.77
CHMP6-202ENST00000571457 ZCCHC11Q5TAX3 1644 aaKnown RBP19.82■□□□□ 0.76
CHMP6-202ENST00000571457 UGGT2Q9NYU1 1516 aa19.81■□□□□ 0.76
CHMP6-202ENST00000571457 WDR7Q9Y4E6 1490 aa19.79■□□□□ 0.76
CHMP6-202ENST00000571457 RAPGEF2Q9Y4G8 1499 aa19.78■□□□□ 0.76
CHMP6-202ENST00000571457 KIAA0556O60303 1618 aa19.76■□□□□ 0.75
CHMP6-202ENST00000571457 CD109Q6YHK3 1445 aa19.73■□□□□ 0.75
CHMP6-202ENST00000571457 MAGI3Q5TCQ9 1506 aa19.72■□□□□ 0.75
CHMP6-202ENST00000571457 CFAP43Q8NDM7 1665 aa19.69■□□□□ 0.74
CHMP6-202ENST00000571457 KCNH8Q96L42 1107 aa19.68■□□□□ 0.74
CHMP6-202ENST00000571457 GOLGA3Q08378 1498 aa19.67■□□□□ 0.74
CHMP6-202ENST00000571457 ABCA8O94911 1581 aa19.61■□□□□ 0.73
CHMP6-202ENST00000571457 FAM9AQ8IZU1 332 aaPredicted RBP19.61■□□□□ 0.73
CHMP6-202ENST00000571457 FBXO41Q8TF61 875 aa19.61■□□□□ 0.73
CHMP6-202ENST00000571457 CTTNBP2Q8WZ74 1663 aa19.59■□□□□ 0.73
CHMP6-202ENST00000571457 KIF21BO75037 1637 aa19.58■□□□□ 0.73
CHMP6-202ENST00000571457 ARAP3Q8WWN8 1544 aa19.58■□□□□ 0.73
CHMP6-202ENST00000571457 PHLDB1Q86UU1 1377 aa19.56■□□□□ 0.72
CHMP6-202ENST00000571457 PTPRMP28827 1452 aa19.51■□□□□ 0.71
CHMP6-202ENST00000571457 ADAMTSL3P82987 1691 aa19.47■□□□□ 0.71
CHMP6-202ENST00000571457 ATP10BO94823 1461 aa19.46■□□□□ 0.71
CHMP6-202ENST00000571457 ABCA9Q8IUA7 1624 aa19.45■□□□□ 0.7
CHMP6-202ENST00000571457 ARID3CA6NKF2 412 aa19.45■□□□□ 0.7
CHMP6-202ENST00000571457 NEO1Q92859 1461 aa19.44■□□□□ 0.7
CHMP6-202ENST00000571457 PRXQ9BXM0 1461 aa19.44■□□□□ 0.7
CHMP6-202ENST00000571457 RAPGEF3O95398 923 aa19.44■□□□□ 0.7
CHMP6-202ENST00000571457 ARID4BQ4LE39 1312 aaPredicted RBP19.43■□□□□ 0.7
CHMP6-202ENST00000571457 P3H3Q8IVL6 736 aa19.4■□□□□ 0.7
CHMP6-202ENST00000571457 PCF11O94913 1555 aaKnown RBP19.4■□□□□ 0.7
CHMP6-202ENST00000571457 BCORL1Q5H9F3 1711 aa19.39■□□□□ 0.69
CHMP6-202ENST00000571457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.36■□□□□ 0.69
CHMP6-202ENST00000571457 HNRNPUL2Q1KMD3 747 aaKnown RBP19.36■□□□□ 0.69
CHMP6-202ENST00000571457 MADDQ8WXG6 1647 aa19.36■□□□□ 0.69
CHMP6-202ENST00000571457 LMTK3Q96Q04 1460 aa19.35■□□□□ 0.69
CHMP6-202ENST00000571457 RAPGEF6Q8TEU7 1601 aa19.33■□□□□ 0.68
CHMP6-202ENST00000571457 FRMPD1Q5SYB0 1578 aa19.32■□□□□ 0.68
CHMP6-202ENST00000571457 SAMD9Q5K651 1589 aa19.3■□□□□ 0.68
CHMP6-202ENST00000571457 ARHGEF40Q8TER5 1519 aa19.3■□□□□ 0.68
CHMP6-202ENST00000571457 DENND4BO75064 1496 aaPredicted RBP19.29■□□□□ 0.68
CHMP6-202ENST00000571457 POGZQ7Z3K3 1410 aa19.29■□□□□ 0.68
CHMP6-202ENST00000571457 RIMS1Q86UR5 1692 aaKnown RBP19.27■□□□□ 0.68
CHMP6-202ENST00000571457 PLEKHD1A6NEE1 506 aa19.27■□□□□ 0.68
CHMP6-202ENST00000571457 FHOD3Q2V2M9 1422 aa19.25■□□□□ 0.67
CHMP6-202ENST00000571457 AKNAQ7Z591 1439 aa19.25■□□□□ 0.67
CHMP6-202ENST00000571457 FANCAO15360 1455 aa19.25■□□□□ 0.67
CHMP6-202ENST00000571457 NUP153P49790 1475 aaKnown RBP19.25■□□□□ 0.67
CHMP6-202ENST00000571457 HSPA2P54652 639 aa19.24■□□□□ 0.67
CHMP6-202ENST00000571457 CFAP74Q9C0B2 1584 aa19.23■□□□□ 0.67
CHMP6-202ENST00000571457 RICTORQ6R327 1708 aa19.23■□□□□ 0.67
CHMP6-202ENST00000571457 CSRNP3Q8WYN3 585 aa19.22■□□□□ 0.67
CHMP6-202ENST00000571457 PLPPR3Q6T4P5 718 aa19.2■□□□□ 0.66
CHMP6-202ENST00000571457 CERKQ8TCT0 537 aa19.2■□□□□ 0.66
CHMP6-202ENST00000571457 MAGI2Q86UL8 1455 aa19.2■□□□□ 0.66
CHMP6-202ENST00000571457 ZMYM4Q5VZL5 1548 aa19.2■□□□□ 0.66
CHMP6-202ENST00000571457 EFCAB5A4FU69 1503 aa19.19■□□□□ 0.66
CHMP6-202ENST00000571457 ZFYVE16Q7Z3T8 1539 aa19.18■□□□□ 0.66
CHMP6-202ENST00000571457 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.15■□□□□ 0.66
CHMP6-202ENST00000571457 RANGAP1P46060 587 aaPredicted RBP19.15■□□□□ 0.66
CHMP6-202ENST00000571457 YEATS2Q9ULM3 1422 aa19.14■□□□□ 0.65
CHMP6-202ENST00000571457 MLECQ14165 292 aa19.13■□□□□ 0.65
CHMP6-202ENST00000571457 TTC37Q6PGP7 1564 aa19.11■□□□□ 0.65
CHMP6-202ENST00000571457 FER1L4A9Z1Z3 1794 aa19.11■□□□□ 0.65
CHMP6-202ENST00000571457 HECW1Q76N89 1606 aa19.1■□□□□ 0.65
CHMP6-202ENST00000571457 DMRT2Q9Y5R5 561 aa19.09■□□□□ 0.65
CHMP6-202ENST00000571457 EEA1Q15075 1411 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms