RNA–Protein interactions for RNA: ENST00000571351.1

TNFRSF12A-203, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 2

Gene TNFRSF12A, Length 1,678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-203ENST00000571351 NUP160Q12769 1436 aa33.15■■■□□ 2.9
TNFRSF12A-203ENST00000571351 CTTNBP2Q8WZ74 1663 aa33.14■■■□□ 2.9
TNFRSF12A-203ENST00000571351 KIAA0586Q9BVV6 1533 aa33.02■■■□□ 2.88
TNFRSF12A-203ENST00000571351 IQGAP2Q13576 1575 aa32.99■■■□□ 2.87
TNFRSF12A-203ENST00000571351 CLASP1Q7Z460 1538 aa32.94■■■□□ 2.86
TNFRSF12A-203ENST00000571351 CEP162Q5TB80 1403 aa32.92■■■□□ 2.86
TNFRSF12A-203ENST00000571351 RANGAP1P46060 587 aaPredicted RBP32.88■■■□□ 2.85
TNFRSF12A-203ENST00000571351 OSCARQ8IYS5 282 aa32.88■■■□□ 2.85
TNFRSF12A-203ENST00000571351 UGGT2Q9NYU1 1516 aa32.84■■■□□ 2.85
TNFRSF12A-203ENST00000571351 CLIP1P30622 1438 aa32.83■■■□□ 2.85
TNFRSF12A-203ENST00000571351 SHROOM2Q13796 1616 aa32.81■■■□□ 2.84
TNFRSF12A-203ENST00000571351 JPH4Q96JJ6 628 aa32.8■■■□□ 2.84
TNFRSF12A-203ENST00000571351 ARHGAP35Q9NRY4 1499 aa32.79■■■□□ 2.84
TNFRSF12A-203ENST00000571351 SAMD9Q5K651 1589 aa32.78■■■□□ 2.84
TNFRSF12A-203ENST00000571351 DISP1Q96F81 1524 aa32.74■■■□□ 2.83
TNFRSF12A-203ENST00000571351 EFCAB5A4FU69 1503 aa32.73■■■□□ 2.83
TNFRSF12A-203ENST00000571351 KIAA0556O60303 1618 aa32.68■■■□□ 2.82
TNFRSF12A-203ENST00000571351 ARAP1Q96P48 1450 aa32.68■■■□□ 2.82
TNFRSF12A-203ENST00000571351 PRG4Q92954 1404 aaPredicted RBP32.66■■■□□ 2.82
TNFRSF12A-203ENST00000571351 P3H3Q8IVL6 736 aa32.66■■■□□ 2.82
TNFRSF12A-203ENST00000571351 ERCC6L2Q5T890 1561 aa32.64■■■□□ 2.82
TNFRSF12A-203ENST00000571351 FHOD3Q2V2M9 1422 aa32.62■■■□□ 2.81
TNFRSF12A-203ENST00000571351 CARMIL2Q6F5E8 1435 aa32.58■■■□□ 2.81
TNFRSF12A-203ENST00000571351 VPS8Q8N3P4 1428 aa32.45■■■□□ 2.79
TNFRSF12A-203ENST00000571351 FMN1Q68DA7 1419 aa32.41■■■□□ 2.78
TNFRSF12A-203ENST00000571351 ARHGEF11O15085 1522 aa32.4■■■□□ 2.78
TNFRSF12A-203ENST00000571351 TTBK1Q5TCY1 1321 aaPredicted RBP32.38■■■□□ 2.77
TNFRSF12A-203ENST00000571351 PTPRGP23470 1445 aa32.36■■■□□ 2.77
TNFRSF12A-203ENST00000571351 PCF11O94913 1555 aaKnown RBP32.34■■■□□ 2.77
TNFRSF12A-203ENST00000571351 RIMBP3CA6NJZ7 1639 aa32.32■■■□□ 2.76
TNFRSF12A-203ENST00000571351 RIMBP3BA6NNM3 1639 aa32.32■■■□□ 2.76
TNFRSF12A-203ENST00000571351 RIMBP3Q9UFD9 1639 aa32.32■■■□□ 2.76
TNFRSF12A-203ENST00000571351 PLB1Q6P1J6 1458 aa32.3■■■□□ 2.76
TNFRSF12A-203ENST00000571351 CASKIN1Q8WXD9 1431 aa32.29■■■□□ 2.76
TNFRSF12A-203ENST00000571351 ABCA8O94911 1581 aa32.27■■■□□ 2.76
TNFRSF12A-203ENST00000571351 RAPGEF6Q8TEU7 1601 aa32.26■■■□□ 2.75
TNFRSF12A-203ENST00000571351 FYCO1Q9BQS8 1478 aa32.25■■■□□ 2.75
TNFRSF12A-203ENST00000571351 LRRIQ1Q96JM4 1722 aa32.21■■■□□ 2.75
TNFRSF12A-203ENST00000571351 UACAQ9BZF9 1416 aa32.19■■■□□ 2.74
TNFRSF12A-203ENST00000571351 NUP153P49790 1475 aaKnown RBP32.18■■■□□ 2.74
TNFRSF12A-203ENST00000571351 HECW1Q76N89 1606 aa32.17■■■□□ 2.74
TNFRSF12A-203ENST00000571351 ATP1B4Q9UN42 357 aaPredicted RBP32.14■■■□□ 2.74
TNFRSF12A-203ENST00000571351 ABCC2Q92887 1545 aa32.13■■■□□ 2.73
TNFRSF12A-203ENST00000571351 UHRF1BP1LA0JNW5 1464 aa32.11■■■□□ 2.73
TNFRSF12A-203ENST00000571351 ADCY10Q96PN6 1610 aa32.1■■■□□ 2.73
TNFRSF12A-203ENST00000571351 EPRSP07814 1512 aaKnown RBP32.09■■■□□ 2.73
TNFRSF12A-203ENST00000571351 ARID3CA6NKF2 412 aa32.05■■■□□ 2.72
TNFRSF12A-203ENST00000571351 DNAJC5Q9H3Z4 198 aa32.05■■■□□ 2.72
TNFRSF12A-203ENST00000571351 CDK13Q14004 1512 aaKnown RBP32.05■■■□□ 2.72
TNFRSF12A-203ENST00000571351 TIAM1Q13009 1591 aa32.04■■■□□ 2.72
TNFRSF12A-203ENST00000571351 CFAP43Q8NDM7 1665 aa32.04■■■□□ 2.72
TNFRSF12A-203ENST00000571351 CYB5RLQ6IPT4 315 aa32.04■■■□□ 2.72
TNFRSF12A-203ENST00000571351 MAP3K1Q13233 1512 aa32.03■■■□□ 2.72
TNFRSF12A-203ENST00000571351 ATP10BO94823 1461 aa32.02■■■□□ 2.72
TNFRSF12A-203ENST00000571351 CCDC18Q5T9S5 1454 aa32.02■■■□□ 2.72
TNFRSF12A-203ENST00000571351 KDM5BQ9UGL1 1544 aa31.98■■■□□ 2.71
TNFRSF12A-203ENST00000571351 APLP2Q06481 763 aa31.95■■■□□ 2.71
TNFRSF12A-203ENST00000571351 KANK4Q5T7N3 995 aaPredicted RBP31.95■■■□□ 2.7
TNFRSF12A-203ENST00000571351 ZCCHC11Q5TAX3 1644 aaKnown RBP31.93■■■□□ 2.7
TNFRSF12A-203ENST00000571351 MAGI3Q5TCQ9 1506 aa31.92■■■□□ 2.7
TNFRSF12A-203ENST00000571351 PPARGC1BQ86YN6 1023 aaKnown RBP31.91■■■□□ 2.7
TNFRSF12A-203ENST00000571351 LRRC9Q6ZRR7 1453 aa31.89■■■□□ 2.7
TNFRSF12A-203ENST00000571351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.86■■■□□ 2.69
TNFRSF12A-203ENST00000571351 HNRNPUL2Q1KMD3 747 aaKnown RBP31.86■■■□□ 2.69
TNFRSF12A-203ENST00000571351 MTUS2Q5JR59 1369 aa31.78■■■□□ 2.68
TNFRSF12A-203ENST00000571351 EHBP1L1Q8N3D4 1523 aa31.78■■■□□ 2.68
TNFRSF12A-203ENST00000571351 TROQ12816 1431 aaPredicted RBP31.76■■■□□ 2.67
TNFRSF12A-203ENST00000571351 CDK11AQ9UQ88 783 aaPredicted RBP31.76■■■□□ 2.67
TNFRSF12A-203ENST00000571351 PLEKHD1A6NEE1 506 aa31.73■■■□□ 2.67
TNFRSF12A-203ENST00000571351 NPM1P06748 294 aaKnown RBP eCLIP31.73■■■□□ 2.67
TNFRSF12A-203ENST00000571351 ASXL2Q76L83 1435 aa31.7■■■□□ 2.66
TNFRSF12A-203ENST00000571351 KIF14Q15058 1648 aa31.68■■■□□ 2.66
TNFRSF12A-203ENST00000571351 SUPT6HQ7KZ85 1726 aaKnown RBP31.67■■■□□ 2.66
TNFRSF12A-203ENST00000571351 WDR7Q9Y4E6 1490 aa31.67■■■□□ 2.66
TNFRSF12A-203ENST00000571351 MAPKBP1O60336 1514 aa31.67■■■□□ 2.66
TNFRSF12A-203ENST00000571351 NCOA2Q15596 1464 aa31.64■■■□□ 2.65
TNFRSF12A-203ENST00000571351 TRIM26Q12899 539 aaPredicted RBP31.6■■■□□ 2.65
TNFRSF12A-203ENST00000571351 PHLDB1Q86UU1 1377 aa31.57■■■□□ 2.64
TNFRSF12A-203ENST00000571351 ABCC10Q5T3U5 1492 aa31.57■■■□□ 2.64
TNFRSF12A-203ENST00000571351 KCNH8Q96L42 1107 aa31.57■■■□□ 2.64
TNFRSF12A-203ENST00000571351 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.54■■■□□ 2.64
TNFRSF12A-203ENST00000571351 TTC37Q6PGP7 1564 aa31.52■■■□□ 2.64
TNFRSF12A-203ENST00000571351 CDC42BPAQ5VT25 1732 aa31.46■■■□□ 2.63
TNFRSF12A-203ENST00000571351 ABCA9Q8IUA7 1624 aa31.46■■■□□ 2.63
TNFRSF12A-203ENST00000571351 GPATCH8Q9UKJ3 1502 aaKnown RBP31.45■■■□□ 2.63
TNFRSF12A-203ENST00000571351 MYOM3Q5VTT5 1437 aa31.44■■■□□ 2.62
TNFRSF12A-203ENST00000571351 CCNB3Q8WWL7 1395 aa31.43■■■□□ 2.62
TNFRSF12A-203ENST00000571351 DIP2BQ9P265 1576 aa31.41■■■□□ 2.62
TNFRSF12A-203ENST00000571351 PCGF6Q9BYE7 350 aa31.39■■■□□ 2.62
TNFRSF12A-203ENST00000571351 MYO5CQ9NQX4 1742 aa31.38■■■□□ 2.61
TNFRSF12A-203ENST00000571351 CDC42BPBQ9Y5S2 1711 aa31.38■■■□□ 2.61
TNFRSF12A-203ENST00000571351 ITSN2Q9NZM3 1697 aa31.38■■■□□ 2.61
TNFRSF12A-203ENST00000571351 GLI2P10070 1586 aa31.38■■■□□ 2.61
TNFRSF12A-203ENST00000571351 FGD6Q6ZV73 1430 aa31.38■■■□□ 2.61
TNFRSF12A-203ENST00000571351 RRBP1Q9P2E9 1410 aaKnown RBP31.38■■■□□ 2.61
TNFRSF12A-203ENST00000571351 PREX2Q70Z35 1606 aa31.37■■■□□ 2.61
TNFRSF12A-203ENST00000571351 KIF13AQ9H1H9 1805 aa31.34■■■□□ 2.61
TNFRSF12A-203ENST00000571351 PLCH2O75038 1416 aa31.32■■■□□ 2.6
TNFRSF12A-203ENST00000571351 MIA2Q96PC5 1412 aa31.32■■■□□ 2.6
TNFRSF12A-203ENST00000571351 MAP3K4Q9Y6R4 1608 aa31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms