RNA–Protein interactions for RNA: ENST00000571351.1

TNFRSF12A-203, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 2

Gene TNFRSF12A, Length 1,678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-203ENST00000571351 NISCHQ9Y2I1 1504 aa48.07■■■■■ 5.29
TNFRSF12A-203ENST00000571351 CCDC180Q9P1Z9 1646 aa42.29■■■■■ 4.36
TNFRSF12A-203ENST00000571351 ABCC9O60706 1549 aa40.57■■■■■ 4.09
TNFRSF12A-203ENST00000571351 ZCCHC6Q5VYS8 1495 aaKnown RBP40.25■■■■■ 4.03
TNFRSF12A-203ENST00000571351 DCAF1Q9Y4B6 1507 aa39.78■■■■□ 3.96
TNFRSF12A-203ENST00000571351 DCAF8L2P0C7V8 631 aa39.76■■■■□ 3.96
TNFRSF12A-203ENST00000571351 MYO15BQ96JP2 1530 aa39.59■■■■□ 3.93
TNFRSF12A-203ENST00000571351 NACADO15069 1562 aa39.53■■■■□ 3.92
TNFRSF12A-203ENST00000571351 RB1CC1Q8TDY2 1594 aa39.35■■■■□ 3.89
TNFRSF12A-203ENST00000571351 SCRIBQ14160 1630 aa38.73■■■■□ 3.79
TNFRSF12A-203ENST00000571351 UNC13AQ9UPW8 1703 aa38.62■■■■□ 3.77
TNFRSF12A-203ENST00000571351 SHROOM4Q9ULL8 1493 aa38.58■■■■□ 3.77
TNFRSF12A-203ENST00000571351 BICRAQ9NZM4 1560 aa38.25■■■■□ 3.71
TNFRSF12A-203ENST00000571351 PABPN1Q86U42 306 aaKnown RBP eCLIP38.09■■■■□ 3.692e-6■□□□□ 8.8
TNFRSF12A-203ENST00000571351 CECR2Q9BXF3 1484 aa37.42■■■■□ 3.58
TNFRSF12A-203ENST00000571351 BAZ1AQ9NRL2 1556 aaPredicted RBP37.16■■■■□ 3.54
TNFRSF12A-203ENST00000571351 EIF4G1Q04637 1599 aaKnown RBP37.12■■■■□ 3.53
TNFRSF12A-203ENST00000571351 SMARCA4P51532 1647 aa37.12■■■■□ 3.53
TNFRSF12A-203ENST00000571351 MROH2BQ7Z745 1585 aa37.11■■■■□ 3.53
TNFRSF12A-203ENST00000571351 RSF1Q96T23 1441 aaPredicted RBP37■■■■□ 3.51
TNFRSF12A-203ENST00000571351 WIZO95785 1651 aa36.77■■■■□ 3.48
TNFRSF12A-203ENST00000571351 CC2D2AQ9P2K1 1620 aa36.75■■■■□ 3.47
TNFRSF12A-203ENST00000571351 PEG3Q9GZU2 1588 aa36.73■■■■□ 3.47
TNFRSF12A-203ENST00000571351 SUPT5HO00267 1087 aaKnown RBP36.72■■■■□ 3.47
TNFRSF12A-203ENST00000571351 ATAD2BQ9ULI0 1458 aa36.68■■■■□ 3.46
TNFRSF12A-203ENST00000571351 SMARCA2P51531 1590 aa36.61■■■■□ 3.45
TNFRSF12A-203ENST00000571351 DNAJC5BQ9UF47 199 aa36.51■■■■□ 3.44
TNFRSF12A-203ENST00000571351 NCAPD3P42695 1498 aa36.5■■■■□ 3.43
TNFRSF12A-203ENST00000571351 BAZ1BQ9UIG0 1483 aaKnown RBP36.39■■■■□ 3.42
TNFRSF12A-203ENST00000571351 HMGXB3Q12766 1538 aa36.39■■■■□ 3.42
TNFRSF12A-203ENST00000571351 TOP2AP11388 1531 aaKnown RBP36.36■■■■□ 3.41
TNFRSF12A-203ENST00000571351 CCDC88BA6NC98 1476 aa35.97■■■■□ 3.35
TNFRSF12A-203ENST00000571351 CFTRP13569 1480 aa35.48■■■■□ 3.27
TNFRSF12A-203ENST00000571351 CADPSQ9ULU8 1353 aa35.48■■■■□ 3.27
TNFRSF12A-203ENST00000571351 NESP48681 1621 aa35.43■■■■□ 3.26
TNFRSF12A-203ENST00000571351 LAMC3Q9Y6N6 1575 aa35.37■■■■□ 3.25
TNFRSF12A-203ENST00000571351 PRDM2Q13029 1718 aa35.29■■■■□ 3.24
TNFRSF12A-203ENST00000571351 FANCD2Q9BXW9 1451 aa35.08■■■■□ 3.21
TNFRSF12A-203ENST00000571351 PDS5BQ9NTI5 1447 aa35.07■■■■□ 3.2
TNFRSF12A-203ENST00000571351 KIF21AQ7Z4S6 1674 aa35.02■■■■□ 3.2
TNFRSF12A-203ENST00000571351 ABCC8Q09428 1581 aa34.97■■■■□ 3.19
TNFRSF12A-203ENST00000571351 CEP164Q9UPV0 1460 aa34.92■■■■□ 3.18
TNFRSF12A-203ENST00000571351 CHIC1Q5VXU3 224 aa34.83■■■■□ 3.17
TNFRSF12A-203ENST00000571351 ERCC6Q03468 1493 aa34.81■■■■□ 3.16
TNFRSF12A-203ENST00000571351 WRNQ14191 1432 aaPredicted RBP eCLIP34.81■■■■□ 3.16
TNFRSF12A-203ENST00000571351 SYNJ1O43426 1573 aa34.75■■■■□ 3.15
TNFRSF12A-203ENST00000571351 CUX1P39880 1505 aa34.75■■■■□ 3.15
TNFRSF12A-203ENST00000571351 URB2Q14146 1524 aaKnown RBP34.72■■■■□ 3.15
TNFRSF12A-203ENST00000571351 MRC2Q9UBG0 1479 aa34.68■■■■□ 3.14
TNFRSF12A-203ENST00000571351 THOC2Q8NI27 1593 aaKnown RBP34.66■■■■□ 3.14
TNFRSF12A-203ENST00000571351 TOP2BQ02880 1626 aa34.66■■■■□ 3.14
TNFRSF12A-203ENST00000571351 BIVM-ERCC5R4GMW8 1640 aa34.65■■■■□ 3.14
TNFRSF12A-203ENST00000571351 DNMBPQ6XZF7 1577 aa34.65■■■■□ 3.14
TNFRSF12A-203ENST00000571351 TOPBP1Q92547 1522 aa34.64■■■■□ 3.14
TNFRSF12A-203ENST00000571351 TRIM41Q8WV44 630 aa34.6■■■■□ 3.13
TNFRSF12A-203ENST00000571351 WDR62O43379 1518 aa34.58■■■■□ 3.13
TNFRSF12A-203ENST00000571351 FGD5Q6ZNL6 1462 aa34.46■■■■□ 3.11
TNFRSF12A-203ENST00000571351 POLA1P09884 1462 aaPredicted RBP34.42■■■■□ 3.1
TNFRSF12A-203ENST00000571351 CUX2O14529 1486 aa34.31■■■■□ 3.08
TNFRSF12A-203ENST00000571351 RAD54L2Q9Y4B4 1467 aa34.29■■■■□ 3.08
TNFRSF12A-203ENST00000571351 SOGA1O94964 1423 aa34.25■■■■□ 3.07
TNFRSF12A-203ENST00000571351 TARBP1Q13395 1621 aaKnown RBP34.22■■■■□ 3.07
TNFRSF12A-203ENST00000571351 WDR97A6NE52 1622 aa34.16■■■■□ 3.06
TNFRSF12A-203ENST00000571351 ABCA10Q8WWZ4 1543 aa34.15■■■■□ 3.06
TNFRSF12A-203ENST00000571351 IFT140Q96RY7 1462 aa34.14■■■■□ 3.06
TNFRSF12A-203ENST00000571351 RUSC2Q8N2Y8 1516 aa34.1■■■■□ 3.05
TNFRSF12A-203ENST00000571351 ZNF608Q9ULD9 1512 aaPredicted RBP34.02■■■■□ 3.04
TNFRSF12A-203ENST00000571351 TDRD9Q8NDG6 1382 aaKnown RBP33.99■■■■□ 3.03
TNFRSF12A-203ENST00000571351 KIF27Q86VH2 1401 aa33.98■■■■□ 3.03
TNFRSF12A-203ENST00000571351 ABCA5Q8WWZ7 1642 aa33.97■■■■□ 3.03
TNFRSF12A-203ENST00000571351 AQRO60306 1485 aaKnown RBP eCLIP33.92■■■■□ 3.022e-6■■■■■ 28.3
TNFRSF12A-203ENST00000571351 FAM9AQ8IZU1 332 aaPredicted RBP33.92■■■■□ 3.02
TNFRSF12A-203ENST00000571351 EEA1Q15075 1411 aa33.9■■■■□ 3.02
TNFRSF12A-203ENST00000571351 EIF4G3O43432 1585 aaKnown RBP33.89■■■■□ 3.01
TNFRSF12A-203ENST00000571351 GAPVD1Q14C86 1478 aa33.88■■■■□ 3.01
TNFRSF12A-203ENST00000571351 IGF1RP08069 1367 aa33.8■■■■□ 3
TNFRSF12A-203ENST00000571351 PBRM1Q86U86 1689 aa33.78■■■■□ 3
TNFRSF12A-203ENST00000571351 CSRNP3Q8WYN3 585 aa33.77■■■■□ 3
TNFRSF12A-203ENST00000571351 ERICH3Q5RHP9 1530 aa33.74■■■□□ 2.99
TNFRSF12A-203ENST00000571351 GRIN2BQ13224 1484 aa33.72■■■□□ 2.99
TNFRSF12A-203ENST00000571351 PRXQ9BXM0 1461 aa33.62■■■□□ 2.97
TNFRSF12A-203ENST00000571351 CUL7Q14999 1698 aa33.6■■■□□ 2.97
TNFRSF12A-203ENST00000571351 SNAPC4Q5SXM2 1469 aa33.6■■■□□ 2.97
TNFRSF12A-203ENST00000571351 CARMIL1Q5VZK9 1371 aa33.58■■■□□ 2.97
TNFRSF12A-203ENST00000571351 ADAMTS12P58397 1594 aa33.56■■■□□ 2.96
TNFRSF12A-203ENST00000571351 KIF21BO75037 1637 aa33.55■■■□□ 2.96
TNFRSF12A-203ENST00000571351 MAGI1Q96QZ7 1491 aaPredicted RBP33.54■■■□□ 2.96
TNFRSF12A-203ENST00000571351 RAPGEF2Q9Y4G8 1499 aa33.5■■■□□ 2.95
TNFRSF12A-203ENST00000571351 FHAD1B1AJZ9 1412 aa33.49■■■□□ 2.95
TNFRSF12A-203ENST00000571351 LOC105371045A0A1W2PR82 267 aa33.45■■■□□ 2.95
TNFRSF12A-203ENST00000571351 EHMT2Q96KQ7 1210 aa33.43■■■□□ 2.94
TNFRSF12A-203ENST00000571351 SYNJ2O15056 1496 aa33.41■■■□□ 2.94
TNFRSF12A-203ENST00000571351 GOLGA3Q08378 1498 aa33.4■■■□□ 2.94
TNFRSF12A-203ENST00000571351 GRIN2AQ12879 1464 aa33.33■■■□□ 2.93
TNFRSF12A-203ENST00000571351 CHD1O14646 1710 aa33.3■■■□□ 2.92
TNFRSF12A-203ENST00000571351 CHMP7Q8WUX9 453 aaPredicted RBP33.29■■■□□ 2.92
TNFRSF12A-203ENST00000571351 FBLN2P98095 1184 aa33.26■■■□□ 2.92
TNFRSF12A-203ENST00000571351 UBTFP17480 764 aaKnown RBP33.21■■■□□ 2.91
TNFRSF12A-203ENST00000571351 CEP170Q5SW79 1584 aa33.16■■■□□ 2.9
TNFRSF12A-203ENST00000571351 TNIKQ9UKE5 1360 aa33.16■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms