RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 FHOD3Q2V2M9 1422 aa16.81■□□□□ 0.28
PDXDC1-217ENST00000570001 CHMP7Q8WUX9 453 aaPredicted RBP16.81■□□□□ 0.28
PDXDC1-217ENST00000570001 ARHGAP35Q9NRY4 1499 aa16.8■□□□□ 0.28
PDXDC1-217ENST00000570001 TRIM52Q96A61 297 aa16.79■□□□□ 0.28
PDXDC1-217ENST00000570001 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
PDXDC1-217ENST00000570001 GAPVD1Q14C86 1478 aa16.78■□□□□ 0.28
PDXDC1-217ENST00000570001 CDK11AQ9UQ88 783 aaPredicted RBP16.78■□□□□ 0.28
PDXDC1-217ENST00000570001 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.28
PDXDC1-217ENST00000570001 FMN1Q68DA7 1419 aa16.77■□□□□ 0.27
PDXDC1-217ENST00000570001 CLSPNQ9HAW4 1339 aa16.74■□□□□ 0.27
PDXDC1-217ENST00000570001 ABCA10Q8WWZ4 1543 aa16.73■□□□□ 0.27
PDXDC1-217ENST00000570001 PRDM2Q13029 1718 aa16.68■□□□□ 0.26
PDXDC1-217ENST00000570001 CHIC2Q9UKJ5 165 aa16.68■□□□□ 0.26
PDXDC1-217ENST00000570001 URB2Q14146 1524 aaKnown RBP16.66■□□□□ 0.26
PDXDC1-217ENST00000570001 ZNF777Q9ULD5 760 aaPredicted RBP16.64■□□□□ 0.25
PDXDC1-217ENST00000570001 AQRO60306 1485 aaKnown RBP eCLIP16.63■□□□□ 0.253e-7■■■■□ 23.4
PDXDC1-217ENST00000570001 SETD5Q9C0A6 1442 aa16.63■□□□□ 0.25
PDXDC1-217ENST00000570001 RAB3GAP2Q9H2M9 1393 aa16.62■□□□□ 0.25
PDXDC1-217ENST00000570001 LRRC9Q6ZRR7 1453 aa16.61■□□□□ 0.25
PDXDC1-217ENST00000570001 MRC2Q9UBG0 1479 aa16.61■□□□□ 0.25
PDXDC1-217ENST00000570001 TONSLQ96HA7 1378 aa16.6■□□□□ 0.25
PDXDC1-217ENST00000570001 RRP7BPQ9NSQ0 103 aa16.59■□□□□ 0.25
PDXDC1-217ENST00000570001 DHX57Q6P158 1386 aaKnown RBP16.59■□□□□ 0.25
PDXDC1-217ENST00000570001 RRBP1Q9P2E9 1410 aaKnown RBP16.59■□□□□ 0.25
PDXDC1-217ENST00000570001 EFCAB5A4FU69 1503 aa16.59■□□□□ 0.25
PDXDC1-217ENST00000570001 CUL7Q14999 1698 aa16.58■□□□□ 0.25
PDXDC1-217ENST00000570001 ACIN1Q9UKV3 1341 aaKnown RBP16.58■□□□□ 0.24
PDXDC1-217ENST00000570001 CASKIN1Q8WXD9 1431 aa16.58■□□□□ 0.24
PDXDC1-217ENST00000570001 PHLDB1Q86UU1 1377 aa16.56■□□□□ 0.24
PDXDC1-217ENST00000570001 TIAM1Q13009 1591 aa16.56■□□□□ 0.24
PDXDC1-217ENST00000570001 FYCO1Q9BQS8 1478 aa16.55■□□□□ 0.24
PDXDC1-217ENST00000570001 MIER1Q8N108 512 aa16.55■□□□□ 0.24
PDXDC1-217ENST00000570001 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
PDXDC1-217ENST00000570001 SIN3AQ96ST3 1273 aa16.53■□□□□ 0.24
PDXDC1-217ENST00000570001 PELP1Q8IZL8 1130 aaKnown RBP16.53■□□□□ 0.24
PDXDC1-217ENST00000570001 IFT140Q96RY7 1462 aa16.5■□□□□ 0.23
PDXDC1-217ENST00000570001 PLEKHD1A6NEE1 506 aa16.49■□□□□ 0.23
PDXDC1-217ENST00000570001 GTF3C3Q9Y5Q9 886 aa16.49■□□□□ 0.23
PDXDC1-217ENST00000570001 PCF11O94913 1555 aaKnown RBP16.48■□□□□ 0.23
PDXDC1-217ENST00000570001 CFDP1Q9UEE9 299 aaPredicted RBP16.48■□□□□ 0.23
PDXDC1-217ENST00000570001 CARMIL2Q6F5E8 1435 aa16.47■□□□□ 0.23
PDXDC1-217ENST00000570001 MAP3K1Q13233 1512 aa16.47■□□□□ 0.23
PDXDC1-217ENST00000570001 MYT1LQ9UL68 1186 aa16.46■□□□□ 0.23
PDXDC1-217ENST00000570001 FGD6Q6ZV73 1430 aa16.44■□□□□ 0.22
PDXDC1-217ENST00000570001 DDX10Q13206 875 aaKnown RBP16.43■□□□□ 0.22
PDXDC1-217ENST00000570001 ANP32CO43423 234 aa16.43■□□□□ 0.22
PDXDC1-217ENST00000570001 POLR3GLQ9BT43 218 aa16.43■□□□□ 0.22
PDXDC1-217ENST00000570001 JPH4Q96JJ6 628 aa16.42■□□□□ 0.22
PDXDC1-217ENST00000570001 KIF21AQ7Z4S6 1674 aa16.42■□□□□ 0.22
PDXDC1-217ENST00000570001 TIMELESSQ9UNS1 1208 aa16.41■□□□□ 0.22
PDXDC1-217ENST00000570001 CCDC18Q5T9S5 1454 aa16.41■□□□□ 0.22
PDXDC1-217ENST00000570001 ZNF326Q5BKZ1 582 aaKnown RBP16.41■□□□□ 0.22
PDXDC1-217ENST00000570001 TSPY4P0CV99 314 aa16.4■□□□□ 0.22
PDXDC1-217ENST00000570001 TSPY10P0CW01 314 aa16.4■□□□□ 0.22
PDXDC1-217ENST00000570001 HIRIP3Q9BW71 556 aaPredicted RBP16.4■□□□□ 0.22
PDXDC1-217ENST00000570001 MYOM3Q5VTT5 1437 aa16.4■□□□□ 0.22
PDXDC1-217ENST00000570001 NCOA2Q15596 1464 aa16.39■□□□□ 0.21
PDXDC1-217ENST00000570001 SLC4A1APQ9BWU0 796 aaKnown RBP16.39■□□□□ 0.21
PDXDC1-217ENST00000570001 SNAPC4Q5SXM2 1469 aa16.38■□□□□ 0.21
PDXDC1-217ENST00000570001 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
PDXDC1-217ENST00000570001 IQGAP2Q13576 1575 aa16.36■□□□□ 0.21
PDXDC1-217ENST00000570001 CTTNBP2Q8WZ74 1663 aa16.36■□□□□ 0.21
PDXDC1-217ENST00000570001 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
PDXDC1-217ENST00000570001 NEFLP07196 543 aa16.35■□□□□ 0.21
PDXDC1-217ENST00000570001 EHBP1L1Q8N3D4 1523 aa16.32■□□□□ 0.2
PDXDC1-217ENST00000570001 ABCA5Q8WWZ7 1642 aa16.32■□□□□ 0.2
PDXDC1-217ENST00000570001 KIAA0586Q9BVV6 1533 aa16.31■□□□□ 0.2
PDXDC1-217ENST00000570001 CNGB1Q14028 1251 aaPredicted RBP16.3■□□□□ 0.2
PDXDC1-217ENST00000570001 HECW1Q76N89 1606 aa16.3■□□□□ 0.2
PDXDC1-217ENST00000570001 KCNH8Q96L42 1107 aa16.3■□□□□ 0.2
PDXDC1-217ENST00000570001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.29■□□□□ 0.26e-6■□□□□ 9.1
PDXDC1-217ENST00000570001 PPP1R15AO75807 674 aaPredicted RBP16.28■□□□□ 0.2
PDXDC1-217ENST00000570001 SUPT6HQ7KZ85 1726 aaKnown RBP16.26■□□□□ 0.19
PDXDC1-217ENST00000570001 MPHOSPH9Q99550 1183 aa16.26■□□□□ 0.19
PDXDC1-217ENST00000570001 EPRSP07814 1512 aaKnown RBP16.26■□□□□ 0.19
PDXDC1-217ENST00000570001 GRIN2AQ12879 1464 aa16.26■□□□□ 0.19
PDXDC1-217ENST00000570001 EIF4G2P78344 907 aaKnown RBP eCLIP16.25■□□□□ 0.19
PDXDC1-217ENST00000570001 CFAP43Q8NDM7 1665 aa16.24■□□□□ 0.19
PDXDC1-217ENST00000570001 CDK13Q14004 1512 aaKnown RBP16.24■□□□□ 0.19
PDXDC1-217ENST00000570001 FOXD1Q16676 465 aa16.24■□□□□ 0.19
PDXDC1-217ENST00000570001 ADAMTS12P58397 1594 aa16.23■□□□□ 0.19
PDXDC1-217ENST00000570001 UACAQ9BZF9 1416 aa16.23■□□□□ 0.19
PDXDC1-217ENST00000570001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.22■□□□□ 0.194e-7■■□□□ 12.8
PDXDC1-217ENST00000570001 MAGI1Q96QZ7 1491 aaPredicted RBP16.22■□□□□ 0.19
PDXDC1-217ENST00000570001 TARBP1Q13395 1621 aaKnown RBP16.22■□□□□ 0.19
PDXDC1-217ENST00000570001 SYNJ2O15056 1496 aa16.22■□□□□ 0.19
PDXDC1-217ENST00000570001 PTPRGP23470 1445 aa16.21■□□□□ 0.19
PDXDC1-217ENST00000570001 ZNF644Q9H582 1327 aaPredicted RBP16.21■□□□□ 0.19
PDXDC1-217ENST00000570001 HFM1A2PYH4 1435 aa16.21■□□□□ 0.18
PDXDC1-217ENST00000570001 WDR62O43379 1518 aa16.19■□□□□ 0.18
PDXDC1-217ENST00000570001 PBRM1Q86U86 1689 aa16.19■□□□□ 0.18
PDXDC1-217ENST00000570001 THOC2Q8NI27 1593 aaKnown RBP16.19■□□□□ 0.18
PDXDC1-217ENST00000570001 MIA2Q96PC5 1412 aa16.19■□□□□ 0.18
PDXDC1-217ENST00000570001 ANKRD30AQ9BXX3 1397 aa16.18■□□□□ 0.18
PDXDC1-217ENST00000570001 WDR97A6NE52 1622 aa16.16■□□□□ 0.18
PDXDC1-217ENST00000570001 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
PDXDC1-217ENST00000570001 SAMD9Q5K651 1589 aa16.15■□□□□ 0.18
PDXDC1-217ENST00000570001 KDM2AQ9Y2K7 1162 aa16.15■□□□□ 0.18
PDXDC1-217ENST00000570001 PRG4Q92954 1404 aaPredicted RBP16.14■□□□□ 0.17
PDXDC1-217ENST00000570001 PTPN23Q9H3S7 1636 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms