RNA–Protein interactions for RNA: ENST00000569983.5

PKD1-237, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-237ENST00000569983 CARMIL1Q5VZK9 1371 aa34.56■■■■□ 3.12
PKD1-237ENST00000569983 PRG4Q92954 1404 aaPredicted RBP34.55■■■■□ 3.12
PKD1-237ENST00000569983 TRHP20396 242 aaPredicted RBP34.53■■■■□ 3.12
PKD1-237ENST00000569983 KIAA0586Q9BVV6 1533 aa34.49■■■■□ 3.11
PKD1-237ENST00000569983 RAPGEF2Q9Y4G8 1499 aa34.3■■■■□ 3.08
PKD1-237ENST00000569983 IQGAP2Q13576 1575 aa34.23■■■■□ 3.07
PKD1-237ENST00000569983 CARMIL2Q6F5E8 1435 aa34.16■■■■□ 3.06
PKD1-237ENST00000569983 PTPRGP23470 1445 aa34.09■■■■□ 3.05
PKD1-237ENST00000569983 ADCY10Q96PN6 1610 aa34.08■■■■□ 3.05
PKD1-237ENST00000569983 NPM1P06748 294 aaKnown RBP eCLIP34.07■■■■□ 3.04
PKD1-237ENST00000569983 TNIKQ9UKE5 1360 aa34.07■■■■□ 3.04
PKD1-237ENST00000569983 PRXQ9BXM0 1461 aa34.07■■■■□ 3.04
PKD1-237ENST00000569983 TTBK1Q5TCY1 1321 aaPredicted RBP34.04■■■■□ 3.04
PKD1-237ENST00000569983 UGGT2Q9NYU1 1516 aa34.03■■■■□ 3.04
PKD1-237ENST00000569983 DISP1Q96F81 1524 aa34.01■■■■□ 3.04
PKD1-237ENST00000569983 CTTNBP2Q8WZ74 1663 aa33.99■■■■□ 3.03
PKD1-237ENST00000569983 MAPKBP1O60336 1514 aa33.95■■■■□ 3.03
PKD1-237ENST00000569983 CSRNP3Q8WYN3 585 aa33.94■■■■□ 3.02
PKD1-237ENST00000569983 KIAA0556O60303 1618 aa33.91■■■■□ 3.02
PKD1-237ENST00000569983 KIF13AQ9H1H9 1805 aa33.9■■■■□ 3.02
PKD1-237ENST00000569983 EEA1Q15075 1411 aa33.89■■■■□ 3.02
PKD1-237ENST00000569983 ABCC10Q5T3U5 1492 aa33.86■■■■□ 3.01
PKD1-237ENST00000569983 UACAQ9BZF9 1416 aa33.85■■■■□ 3.01
PKD1-237ENST00000569983 ABCC2Q92887 1545 aa33.84■■■■□ 3.01
PKD1-237ENST00000569983 UHRF1BP1LA0JNW5 1464 aa33.82■■■■□ 3.01
PKD1-237ENST00000569983 GOLGA3Q08378 1498 aa33.82■■■■□ 3.01
PKD1-237ENST00000569983 FAM69CQ0P6D2 419 aa33.82■■■■□ 3
PKD1-237ENST00000569983 DIP2BQ9P265 1576 aa33.79■■■■□ 3
PKD1-237ENST00000569983 FAM9AQ8IZU1 332 aaPredicted RBP33.75■■■□□ 2.99
PKD1-237ENST00000569983 CHIC1Q5VXU3 224 aa33.74■■■□□ 2.99
PKD1-237ENST00000569983 ASXL2Q76L83 1435 aa33.67■■■□□ 2.98
PKD1-237ENST00000569983 KDM5BQ9UGL1 1544 aa33.66■■■□□ 2.98
PKD1-237ENST00000569983 PLB1Q6P1J6 1458 aa33.65■■■□□ 2.98
PKD1-237ENST00000569983 ZCCHC11Q5TAX3 1644 aaKnown RBP33.6■■■□□ 2.97
PKD1-237ENST00000569983 KIF21BO75037 1637 aa33.57■■■□□ 2.97
PKD1-237ENST00000569983 ABCA8O94911 1581 aa33.56■■■□□ 2.96
PKD1-237ENST00000569983 P3H3Q8IVL6 736 aa33.56■■■□□ 2.96
PKD1-237ENST00000569983 SAMD9Q5K651 1589 aa33.53■■■□□ 2.96
PKD1-237ENST00000569983 TSPOAP1O95153 1857 aa33.52■■■□□ 2.96
PKD1-237ENST00000569983 GLI2P10070 1586 aa33.51■■■□□ 2.95
PKD1-237ENST00000569983 EPRSP07814 1512 aaKnown RBP33.47■■■□□ 2.95
PKD1-237ENST00000569983 RANGAP1P46060 587 aaPredicted RBP33.46■■■□□ 2.95
PKD1-237ENST00000569983 WDR7Q9Y4E6 1490 aa33.43■■■□□ 2.94
PKD1-237ENST00000569983 KDM6BO15054 1643 aa33.38■■■□□ 2.93
PKD1-237ENST00000569983 EHMT2Q96KQ7 1210 aa33.37■■■□□ 2.93
PKD1-237ENST00000569983 PPRC1Q5VV67 1664 aaKnown RBP33.34■■■□□ 2.93
PKD1-237ENST00000569983 UBTFP17480 764 aaKnown RBP33.34■■■□□ 2.93
PKD1-237ENST00000569983 MAP3K4Q9Y6R4 1608 aa33.34■■■□□ 2.93
PKD1-237ENST00000569983 FHOD3Q2V2M9 1422 aa33.34■■■□□ 2.93
PKD1-237ENST00000569983 ARID3CA6NKF2 412 aa33.32■■■□□ 2.92
PKD1-237ENST00000569983 EFCAB5A4FU69 1503 aa33.32■■■□□ 2.92
PKD1-237ENST00000569983 RAPGEF6Q8TEU7 1601 aa33.31■■■□□ 2.92
PKD1-237ENST00000569983 ATP10BO94823 1461 aa33.3■■■□□ 2.92
PKD1-237ENST00000569983 KCNH8Q96L42 1107 aa33.28■■■□□ 2.92
PKD1-237ENST00000569983 TEX14Q8IWB6 1497 aa33.25■■■□□ 2.91
PKD1-237ENST00000569983 NUP153P49790 1475 aaKnown RBP33.18■■■□□ 2.9
PKD1-237ENST00000569983 CD109Q6YHK3 1445 aa33.18■■■□□ 2.9
PKD1-237ENST00000569983 CFAP43Q8NDM7 1665 aa33.17■■■□□ 2.9
PKD1-237ENST00000569983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.17■■■□□ 2.9
PKD1-237ENST00000569983 HNRNPUL2Q1KMD3 747 aaKnown RBP33.17■■■□□ 2.9
PKD1-237ENST00000569983 AEBP2Q6ZN18 517 aaPredicted RBP33.13■■■□□ 2.89
PKD1-237ENST00000569983 MAGI3Q5TCQ9 1506 aa33.12■■■□□ 2.89
PKD1-237ENST00000569983 COL17A1Q9UMD9 1497 aaPredicted RBP33.08■■■□□ 2.89
PKD1-237ENST00000569983 ARHGAP35Q9NRY4 1499 aa33.07■■■□□ 2.88
PKD1-237ENST00000569983 FMN1Q68DA7 1419 aa33.02■■■□□ 2.88
PKD1-237ENST00000569983 ABCA9Q8IUA7 1624 aa33.02■■■□□ 2.88
PKD1-237ENST00000569983 PLEKHD1A6NEE1 506 aa32.98■■■□□ 2.87
PKD1-237ENST00000569983 ATP1B4Q9UN42 357 aaPredicted RBP32.92■■■□□ 2.86
PKD1-237ENST00000569983 CDK13Q14004 1512 aaKnown RBP32.92■■■□□ 2.86
PKD1-237ENST00000569983 HECW1Q76N89 1606 aa32.91■■■□□ 2.86
PKD1-237ENST00000569983 PHLDB1Q86UU1 1377 aa32.84■■■□□ 2.85
PKD1-237ENST00000569983 ARAP3Q8WWN8 1544 aa32.84■■■□□ 2.85
PKD1-237ENST00000569983 NEO1Q92859 1461 aa32.8■■■□□ 2.84
PKD1-237ENST00000569983 KDM4FA0A1W2PPD8 638 aa32.8■■■□□ 2.84
PKD1-237ENST00000569983 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.79■■■□□ 2.84
PKD1-237ENST00000569983 CDK11AQ9UQ88 783 aaPredicted RBP32.76■■■□□ 2.83
PKD1-237ENST00000569983 CLIP1P30622 1438 aa32.75■■■□□ 2.83
PKD1-237ENST00000569983 TTC37Q6PGP7 1564 aa32.75■■■□□ 2.83
PKD1-237ENST00000569983 CASKIN1Q8WXD9 1431 aa32.7■■■□□ 2.83
PKD1-237ENST00000569983 PCF11O94913 1555 aaKnown RBP32.7■■■□□ 2.82
PKD1-237ENST00000569983 ADGRL1O94910 1474 aa32.68■■■□□ 2.82
PKD1-237ENST00000569983 LRRIQ1Q96JM4 1722 aa32.68■■■□□ 2.82
PKD1-237ENST00000569983 FANCAO15360 1455 aa32.67■■■□□ 2.82
PKD1-237ENST00000569983 RAPGEF3O95398 923 aa32.67■■■□□ 2.82
PKD1-237ENST00000569983 CFAP74Q9C0B2 1584 aa32.66■■■□□ 2.82
PKD1-237ENST00000569983 TROQ12816 1431 aaPredicted RBP32.64■■■□□ 2.82
PKD1-237ENST00000569983 AKNAQ7Z591 1439 aa32.64■■■□□ 2.82
PKD1-237ENST00000569983 CCDC18Q5T9S5 1454 aa32.63■■■□□ 2.81
PKD1-237ENST00000569983 KIF14Q15058 1648 aa32.61■■■□□ 2.81
PKD1-237ENST00000569983 FYCO1Q9BQS8 1478 aa32.61■■■□□ 2.81
PKD1-237ENST00000569983 PLCH2O75038 1416 aa32.6■■■□□ 2.81
PKD1-237ENST00000569983 FRMPD1Q5SYB0 1578 aa32.59■■■□□ 2.81
PKD1-237ENST00000569983 DENND4BO75064 1496 aaPredicted RBP32.59■■■□□ 2.81
PKD1-237ENST00000569983 MYO5CQ9NQX4 1742 aa32.55■■■□□ 2.8
PKD1-237ENST00000569983 RICTORQ6R327 1708 aa32.51■■■□□ 2.8
PKD1-237ENST00000569983 CEP162Q5TB80 1403 aa32.5■■■□□ 2.79
PKD1-237ENST00000569983 EFCAB2Q5VUJ9 269 aa32.49■■■□□ 2.79
PKD1-237ENST00000569983 SCAPERQ9BY12 1400 aa32.45■■■□□ 2.79
PKD1-237ENST00000569983 ARHGAP5Q13017 1502 aa32.43■■■□□ 2.78
PKD1-237ENST00000569983 ZMYM4Q5VZL5 1548 aa32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms