RNA–Protein interactions for RNA: ENST00000569983.5

PKD1-237, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-237ENST00000569983 NISCHQ9Y2I1 1504 aa49.69■■■■■ 5.54
PKD1-237ENST00000569983 CCDC180Q9P1Z9 1646 aa44.35■■■■■ 4.69
PKD1-237ENST00000569983 ABCC9O60706 1549 aa43.84■■■■■ 4.61
PKD1-237ENST00000569983 RB1CC1Q8TDY2 1594 aa41.97■■■■■ 4.31
PKD1-237ENST00000569983 NACADO15069 1562 aa41.82■■■■■ 4.29
PKD1-237ENST00000569983 DCAF8L2P0C7V8 631 aa41.74■■■■■ 4.27
PKD1-237ENST00000569983 MYO15BQ96JP2 1530 aa41.41■■■■■ 4.22
PKD1-237ENST00000569983 ZCCHC6Q5VYS8 1495 aaKnown RBP41.3■■■■■ 4.2
PKD1-237ENST00000569983 DCAF1Q9Y4B6 1507 aa41.08■■■■■ 4.17
PKD1-237ENST00000569983 UNC13AQ9UPW8 1703 aa40.98■■■■■ 4.15
PKD1-237ENST00000569983 PABPN1Q86U42 306 aaKnown RBP eCLIP40.91■■■■■ 4.14
PKD1-237ENST00000569983 BICRAQ9NZM4 1560 aa40.69■■■■■ 4.11
PKD1-237ENST00000569983 DNAJC5BQ9UF47 199 aa40.61■■■■■ 4.09
PKD1-237ENST00000569983 SCRIBQ14160 1630 aa40.46■■■■■ 4.07
PKD1-237ENST00000569983 SHROOM4Q9ULL8 1493 aa40.24■■■■■ 4.03
PKD1-237ENST00000569983 EIF4G1Q04637 1599 aaKnown RBP39.67■■■■□ 3.94
PKD1-237ENST00000569983 CC2D2AQ9P2K1 1620 aa39.62■■■■□ 3.93
PKD1-237ENST00000569983 CECR2Q9BXF3 1484 aa39.44■■■■□ 3.9
PKD1-237ENST00000569983 SMARCA4P51532 1647 aa38.64■■■■□ 3.78
PKD1-237ENST00000569983 NCAPD3P42695 1498 aa38.59■■■■□ 3.77
PKD1-237ENST00000569983 ATAD2BQ9ULI0 1458 aa38.55■■■■□ 3.76
PKD1-237ENST00000569983 BAZ1AQ9NRL2 1556 aaPredicted RBP38.55■■■■□ 3.76
PKD1-237ENST00000569983 SMARCA2P51531 1590 aa38.49■■■■□ 3.75
PKD1-237ENST00000569983 HMGXB3Q12766 1538 aa38.36■■■■□ 3.73
PKD1-237ENST00000569983 MROH2BQ7Z745 1585 aa38.28■■■■□ 3.72
PKD1-237ENST00000569983 PEG3Q9GZU2 1588 aa38.26■■■■□ 3.72
PKD1-237ENST00000569983 BAZ1BQ9UIG0 1483 aaKnown RBP38.22■■■■□ 3.71
PKD1-237ENST00000569983 WIZO95785 1651 aa37.85■■■■□ 3.65
PKD1-237ENST00000569983 ERCC6Q03468 1493 aa37.84■■■■□ 3.65
PKD1-237ENST00000569983 NESP48681 1621 aa37.79■■■■□ 3.64
PKD1-237ENST00000569983 RSF1Q96T23 1441 aaPredicted RBP37.7■■■■□ 3.62
PKD1-237ENST00000569983 LAMC3Q9Y6N6 1575 aa37.64■■■■□ 3.62
PKD1-237ENST00000569983 CUX2O14529 1486 aa37.57■■■■□ 3.6
PKD1-237ENST00000569983 CADPSQ9ULU8 1353 aa37.45■■■■□ 3.59
PKD1-237ENST00000569983 TOP2AP11388 1531 aaKnown RBP37.43■■■■□ 3.58
PKD1-237ENST00000569983 PDS5BQ9NTI5 1447 aa37.42■■■■□ 3.58
PKD1-237ENST00000569983 KIF21AQ7Z4S6 1674 aa37.34■■■■□ 3.57
PKD1-237ENST00000569983 THOC2Q8NI27 1593 aaKnown RBP37.31■■■■□ 3.56
PKD1-237ENST00000569983 CFTRP13569 1480 aa37.13■■■■□ 3.54
PKD1-237ENST00000569983 MRC2Q9UBG0 1479 aa37.06■■■■□ 3.52
PKD1-237ENST00000569983 FANCD2Q9BXW9 1451 aa37.03■■■■□ 3.52
PKD1-237ENST00000569983 CEP164Q9UPV0 1460 aa37.03■■■■□ 3.52
PKD1-237ENST00000569983 CCDC88BA6NC98 1476 aa37■■■■□ 3.51
PKD1-237ENST00000569983 WDR62O43379 1518 aa36.94■■■■□ 3.5
PKD1-237ENST00000569983 DNAJC5Q9H3Z4 198 aa36.92■■■■□ 3.5
PKD1-237ENST00000569983 PRDM2Q13029 1718 aa36.79■■■■□ 3.48
PKD1-237ENST00000569983 URB2Q14146 1524 aaKnown RBP36.68■■■■□ 3.46
PKD1-237ENST00000569983 SUPT5HO00267 1087 aaKnown RBP36.47■■■■□ 3.43
PKD1-237ENST00000569983 TOPBP1Q92547 1522 aa36.39■■■■□ 3.42
PKD1-237ENST00000569983 ABCC8Q09428 1581 aa36.36■■■■□ 3.41
PKD1-237ENST00000569983 DNMBPQ6XZF7 1577 aa36.31■■■■□ 3.4
PKD1-237ENST00000569983 IFT140Q96RY7 1462 aa36.26■■■■□ 3.4
PKD1-237ENST00000569983 ZNF608Q9ULD9 1512 aaPredicted RBP36.13■■■■□ 3.38
PKD1-237ENST00000569983 POLA1P09884 1462 aaPredicted RBP36.05■■■■□ 3.36
PKD1-237ENST00000569983 TARBP1Q13395 1621 aaKnown RBP36.01■■■■□ 3.35
PKD1-237ENST00000569983 EIF4G3O43432 1585 aaKnown RBP35.98■■■■□ 3.35
PKD1-237ENST00000569983 CUX1P39880 1505 aa35.95■■■■□ 3.35
PKD1-237ENST00000569983 OSCARQ8IYS5 282 aa35.95■■■■□ 3.35
PKD1-237ENST00000569983 FGD5Q6ZNL6 1462 aa35.9■■■■□ 3.34
PKD1-237ENST00000569983 RAD54L2Q9Y4B4 1467 aa35.9■■■■□ 3.34
PKD1-237ENST00000569983 SOGA1O94964 1423 aa35.9■■■■□ 3.34
PKD1-237ENST00000569983 AQRO60306 1485 aaKnown RBP eCLIP35.88■■■■□ 3.332e-9■■■■■ 49.5
PKD1-237ENST00000569983 TDRD9Q8NDG6 1382 aaKnown RBP35.76■■■■□ 3.31
PKD1-237ENST00000569983 WDR97A6NE52 1622 aa35.69■■■■□ 3.3
PKD1-237ENST00000569983 CHD1O14646 1710 aa35.59■■■■□ 3.29
PKD1-237ENST00000569983 FBLN2P98095 1184 aa35.58■■■■□ 3.29
PKD1-237ENST00000569983 WRNQ14191 1432 aaPredicted RBP eCLIP35.57■■■■□ 3.29
PKD1-237ENST00000569983 TRIM41Q8WV44 630 aa35.56■■■■□ 3.28
PKD1-237ENST00000569983 SNAPC4Q5SXM2 1469 aa35.54■■■■□ 3.28
PKD1-237ENST00000569983 GRIN2BQ13224 1484 aa35.54■■■■□ 3.28
PKD1-237ENST00000569983 ABCA10Q8WWZ4 1543 aa35.52■■■■□ 3.28
PKD1-237ENST00000569983 TOP2BQ02880 1626 aa35.52■■■■□ 3.28
PKD1-237ENST00000569983 BIVM-ERCC5R4GMW8 1640 aa35.51■■■■□ 3.28
PKD1-237ENST00000569983 SYNJ1O43426 1573 aa35.49■■■■□ 3.27
PKD1-237ENST00000569983 MAGI1Q96QZ7 1491 aaPredicted RBP35.48■■■■□ 3.27
PKD1-237ENST00000569983 GAPVD1Q14C86 1478 aa35.48■■■■□ 3.27
PKD1-237ENST00000569983 PBRM1Q86U86 1689 aa35.41■■■■□ 3.26
PKD1-237ENST00000569983 ABCA5Q8WWZ7 1642 aa35.41■■■■□ 3.26
PKD1-237ENST00000569983 RIMBP3CA6NJZ7 1639 aa35.4■■■■□ 3.26
PKD1-237ENST00000569983 RIMBP3BA6NNM3 1639 aa35.4■■■■□ 3.26
PKD1-237ENST00000569983 RIMBP3Q9UFD9 1639 aa35.4■■■■□ 3.26
PKD1-237ENST00000569983 CHMP7Q8WUX9 453 aaPredicted RBP35.4■■■■□ 3.26
PKD1-237ENST00000569983 ARHGEF11O15085 1522 aa35.37■■■■□ 3.25
PKD1-237ENST00000569983 SYNJ2O15056 1496 aa35.35■■■■□ 3.25
PKD1-237ENST00000569983 CLASP1Q7Z460 1538 aa35.2■■■■□ 3.23
PKD1-237ENST00000569983 ADAMTS12P58397 1594 aa35.12■■■■□ 3.21
PKD1-237ENST00000569983 ERICH3Q5RHP9 1530 aa35.1■■■■□ 3.21
PKD1-237ENST00000569983 CYB5RLQ6IPT4 315 aa35.08■■■■□ 3.21
PKD1-237ENST00000569983 GRIN2AQ12879 1464 aa35.07■■■■□ 3.2
PKD1-237ENST00000569983 FHAD1B1AJZ9 1412 aa35.05■■■■□ 3.2
PKD1-237ENST00000569983 ARAP1Q96P48 1450 aa35.04■■■■□ 3.2
PKD1-237ENST00000569983 NUP160Q12769 1436 aa34.92■■■■□ 3.18
PKD1-237ENST00000569983 CEP170Q5SW79 1584 aa34.91■■■■□ 3.18
PKD1-237ENST00000569983 KIF27Q86VH2 1401 aa34.87■■■■□ 3.17
PKD1-237ENST00000569983 IGF1RP08069 1367 aa34.76■■■■□ 3.16
PKD1-237ENST00000569983 SHROOM2Q13796 1616 aa34.7■■■■□ 3.14
PKD1-237ENST00000569983 CUL7Q14999 1698 aa34.7■■■■□ 3.14
PKD1-237ENST00000569983 ERCC6L2Q5T890 1561 aa34.68■■■■□ 3.14
PKD1-237ENST00000569983 RUSC2Q8N2Y8 1516 aa34.6■■■■□ 3.13
PKD1-237ENST00000569983 JPH4Q96JJ6 628 aa34.58■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms