RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 PRG4Q92954 1404 aaPredicted RBP21.7■■□□□ 1.06
SCAMP2-212ENST00000569904 JPH4Q96JJ6 628 aa21.68■■□□□ 1.06
SCAMP2-212ENST00000569904 KIAA0586Q9BVV6 1533 aa21.65■■□□□ 1.06
SCAMP2-212ENST00000569904 KIF13AQ9H1H9 1805 aa21.57■■□□□ 1.04
SCAMP2-212ENST00000569904 CARMIL1Q5VZK9 1371 aa21.55■■□□□ 1.04
SCAMP2-212ENST00000569904 ADCY10Q96PN6 1610 aa21.53■■□□□ 1.04
SCAMP2-212ENST00000569904 MAPKBP1O60336 1514 aa21.51■■□□□ 1.03
SCAMP2-212ENST00000569904 IQGAP2Q13576 1575 aa21.47■■□□□ 1.03
SCAMP2-212ENST00000569904 ABCC10Q5T3U5 1492 aa21.43■■□□□ 1.02
SCAMP2-212ENST00000569904 DIP2BQ9P265 1576 aa21.41■■□□□ 1.02
SCAMP2-212ENST00000569904 RAPGEF2Q9Y4G8 1499 aa21.4■■□□□ 1.02
SCAMP2-212ENST00000569904 CARMIL2Q6F5E8 1435 aa21.39■■□□□ 1.02
SCAMP2-212ENST00000569904 NPM1P06748 294 aaKnown RBP eCLIP21.37■■□□□ 1.01
SCAMP2-212ENST00000569904 PTPRGP23470 1445 aa21.37■■□□□ 1.01
SCAMP2-212ENST00000569904 TNIKQ9UKE5 1360 aa21.36■■□□□ 1.01
SCAMP2-212ENST00000569904 DISP1Q96F81 1524 aa21.36■■□□□ 1.01
SCAMP2-212ENST00000569904 UGGT2Q9NYU1 1516 aa21.36■■□□□ 1.01
SCAMP2-212ENST00000569904 CTTNBP2Q8WZ74 1663 aa21.33■■□□□ 1
SCAMP2-212ENST00000569904 UHRF1BP1LA0JNW5 1464 aa21.32■■□□□ 1
SCAMP2-212ENST00000569904 ABCC2Q92887 1545 aa21.3■■□□□ 1
SCAMP2-212ENST00000569904 KIAA0556O60303 1618 aa21.29■■□□□ 1
SCAMP2-212ENST00000569904 FAM69CQ0P6D2 419 aa21.28■■□□□ 1
SCAMP2-212ENST00000569904 PRXQ9BXM0 1461 aa21.25■□□□□ 0.99
SCAMP2-212ENST00000569904 UACAQ9BZF9 1416 aa21.24■□□□□ 0.99
SCAMP2-212ENST00000569904 GLI2P10070 1586 aa21.22■□□□□ 0.99
SCAMP2-212ENST00000569904 KDM5BQ9UGL1 1544 aa21.21■□□□□ 0.99
SCAMP2-212ENST00000569904 PLB1Q6P1J6 1458 aa21.2■□□□□ 0.98
SCAMP2-212ENST00000569904 TSPOAP1O95153 1857 aa21.2■□□□□ 0.98
SCAMP2-212ENST00000569904 ASXL2Q76L83 1435 aa21.18■□□□□ 0.98
SCAMP2-212ENST00000569904 ZCCHC11Q5TAX3 1644 aaKnown RBP21.17■□□□□ 0.98
SCAMP2-212ENST00000569904 PPRC1Q5VV67 1664 aaKnown RBP21.16■□□□□ 0.98
SCAMP2-212ENST00000569904 KDM6BO15054 1643 aa21.16■□□□□ 0.98
SCAMP2-212ENST00000569904 GOLGA3Q08378 1498 aa21.15■□□□□ 0.98
SCAMP2-212ENST00000569904 TTBK1Q5TCY1 1321 aaPredicted RBP21.12■□□□□ 0.97
SCAMP2-212ENST00000569904 MAP3K4Q9Y6R4 1608 aa21.11■□□□□ 0.97
SCAMP2-212ENST00000569904 ABCA8O94911 1581 aa21.1■□□□□ 0.97
SCAMP2-212ENST00000569904 EPRSP07814 1512 aaKnown RBP21.09■□□□□ 0.97
SCAMP2-212ENST00000569904 AEBP2Q6ZN18 517 aaPredicted RBP21.07■□□□□ 0.96
SCAMP2-212ENST00000569904 EEA1Q15075 1411 aa21.04■□□□□ 0.96
SCAMP2-212ENST00000569904 SAMD9Q5K651 1589 aa21.02■□□□□ 0.95
SCAMP2-212ENST00000569904 WDR7Q9Y4E6 1490 aa21.01■□□□□ 0.95
SCAMP2-212ENST00000569904 CSRNP3Q8WYN3 585 aa21■□□□□ 0.95
SCAMP2-212ENST00000569904 CFAP43Q8NDM7 1665 aa20.97■□□□□ 0.95
SCAMP2-212ENST00000569904 TEX14Q8IWB6 1497 aa20.97■□□□□ 0.95
SCAMP2-212ENST00000569904 COL17A1Q9UMD9 1497 aaPredicted RBP20.92■□□□□ 0.94
SCAMP2-212ENST00000569904 MAGI3Q5TCQ9 1506 aa20.91■□□□□ 0.94
SCAMP2-212ENST00000569904 KIF21BO75037 1637 aa20.89■□□□□ 0.94
SCAMP2-212ENST00000569904 RAPGEF6Q8TEU7 1601 aa20.88■□□□□ 0.93
SCAMP2-212ENST00000569904 ATP10BO94823 1461 aa20.87■□□□□ 0.93
SCAMP2-212ENST00000569904 KDM4FA0A1W2PPD8 638 aa20.84■□□□□ 0.93
SCAMP2-212ENST00000569904 CD109Q6YHK3 1445 aa20.84■□□□□ 0.93
SCAMP2-212ENST00000569904 FAM9AQ8IZU1 332 aaPredicted RBP20.82■□□□□ 0.92
SCAMP2-212ENST00000569904 ABCA9Q8IUA7 1624 aa20.82■□□□□ 0.92
SCAMP2-212ENST00000569904 EFCAB5A4FU69 1503 aa20.8■□□□□ 0.92
SCAMP2-212ENST00000569904 P3H3Q8IVL6 736 aa20.8■□□□□ 0.92
SCAMP2-212ENST00000569904 NUP153P49790 1475 aaKnown RBP20.77■□□□□ 0.92
SCAMP2-212ENST00000569904 KCNH8Q96L42 1107 aa20.76■□□□□ 0.91
SCAMP2-212ENST00000569904 ARAP3Q8WWN8 1544 aa20.74■□□□□ 0.91
SCAMP2-212ENST00000569904 FHOD3Q2V2M9 1422 aa20.74■□□□□ 0.91
SCAMP2-212ENST00000569904 ADGRL1O94910 1474 aa20.73■□□□□ 0.91
SCAMP2-212ENST00000569904 PHLDB1Q86UU1 1377 aa20.69■□□□□ 0.9
SCAMP2-212ENST00000569904 ARID3CA6NKF2 412 aa20.67■□□□□ 0.9
SCAMP2-212ENST00000569904 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
SCAMP2-212ENST00000569904 NEO1Q92859 1461 aa20.66■□□□□ 0.9
SCAMP2-212ENST00000569904 FRMPD1Q5SYB0 1578 aa20.59■□□□□ 0.89
SCAMP2-212ENST00000569904 RANGAP1P46060 587 aaPredicted RBP20.59■□□□□ 0.89
SCAMP2-212ENST00000569904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.58■□□□□ 0.89
SCAMP2-212ENST00000569904 CFAP74Q9C0B2 1584 aa20.58■□□□□ 0.88
SCAMP2-212ENST00000569904 ARHGAP35Q9NRY4 1499 aa20.57■□□□□ 0.88
SCAMP2-212ENST00000569904 FMN1Q68DA7 1419 aa20.56■□□□□ 0.88
SCAMP2-212ENST00000569904 PLEKHD1A6NEE1 506 aa20.56■□□□□ 0.88
SCAMP2-212ENST00000569904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.56■□□□□ 0.88
SCAMP2-212ENST00000569904 HNRNPUL2Q1KMD3 747 aaKnown RBP20.56■□□□□ 0.88
SCAMP2-212ENST00000569904 HECW1Q76N89 1606 aa20.56■□□□□ 0.88
SCAMP2-212ENST00000569904 RICTORQ6R327 1708 aa20.55■□□□□ 0.88
SCAMP2-212ENST00000569904 TTC37Q6PGP7 1564 aa20.55■□□□□ 0.88
SCAMP2-212ENST00000569904 CDK13Q14004 1512 aaKnown RBP20.54■□□□□ 0.88
SCAMP2-212ENST00000569904 UBTFP17480 764 aaKnown RBP20.52■□□□□ 0.88
SCAMP2-212ENST00000569904 FANCAO15360 1455 aa20.5■□□□□ 0.87
SCAMP2-212ENST00000569904 LRRIQ1Q96JM4 1722 aa20.49■□□□□ 0.87
SCAMP2-212ENST00000569904 ADAMTSL3P82987 1691 aa20.48■□□□□ 0.87
SCAMP2-212ENST00000569904 RAPGEF3O95398 923 aa20.48■□□□□ 0.87
SCAMP2-212ENST00000569904 AKNAQ7Z591 1439 aa20.47■□□□□ 0.87
SCAMP2-212ENST00000569904 ARHGEF40Q8TER5 1519 aa20.47■□□□□ 0.87
SCAMP2-212ENST00000569904 DENND4BO75064 1496 aaPredicted RBP20.46■□□□□ 0.87
SCAMP2-212ENST00000569904 ZMYM4Q5VZL5 1548 aa20.46■□□□□ 0.87
SCAMP2-212ENST00000569904 BCORL1Q5H9F3 1711 aa20.45■□□□□ 0.86
SCAMP2-212ENST00000569904 MYO5CQ9NQX4 1742 aa20.44■□□□□ 0.86
SCAMP2-212ENST00000569904 HECW2Q9P2P5 1572 aa20.44■□□□□ 0.86
SCAMP2-212ENST00000569904 PLCH2O75038 1416 aa20.43■□□□□ 0.86
SCAMP2-212ENST00000569904 KIF14Q15058 1648 aa20.4■□□□□ 0.86
SCAMP2-212ENST00000569904 EHMT2Q96KQ7 1210 aa20.4■□□□□ 0.86
SCAMP2-212ENST00000569904 MAGI2Q86UL8 1455 aa20.39■□□□□ 0.85
SCAMP2-212ENST00000569904 TROQ12816 1431 aaPredicted RBP20.38■□□□□ 0.85
SCAMP2-212ENST00000569904 CDK11AQ9UQ88 783 aaPredicted RBP20.37■□□□□ 0.85
SCAMP2-212ENST00000569904 PCF11O94913 1555 aaKnown RBP20.36■□□□□ 0.85
SCAMP2-212ENST00000569904 SIGLEC1Q9BZZ2 1709 aa20.35■□□□□ 0.85
SCAMP2-212ENST00000569904 PTPRMP28827 1452 aa20.35■□□□□ 0.85
SCAMP2-212ENST00000569904 POGZQ7Z3K3 1410 aa20.35■□□□□ 0.85
SCAMP2-212ENST00000569904 CASKIN1Q8WXD9 1431 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms