RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 CUL7Q14999 1698 aa24.29■■□□□ 1.48
GTF3C1-211ENST00000569653 JPH4Q96JJ6 628 aa24.26■■□□□ 1.47
GTF3C1-211ENST00000569653 KIAA0586Q9BVV6 1533 aa24.18■■□□□ 1.46
GTF3C1-211ENST00000569653 KIF13AQ9H1H9 1805 aa24.15■■□□□ 1.46
GTF3C1-211ENST00000569653 CARMIL1Q5VZK9 1371 aa24.13■■□□□ 1.45
GTF3C1-211ENST00000569653 ADCY10Q96PN6 1610 aa24.12■■□□□ 1.45
GTF3C1-211ENST00000569653 IQGAP2Q13576 1575 aa24■■□□□ 1.43
GTF3C1-211ENST00000569653 MAPKBP1O60336 1514 aa23.99■■□□□ 1.43
GTF3C1-211ENST00000569653 DIP2BQ9P265 1576 aa23.95■■□□□ 1.43
GTF3C1-211ENST00000569653 ABCC10Q5T3U5 1492 aa23.94■■□□□ 1.42
GTF3C1-211ENST00000569653 RAPGEF2Q9Y4G8 1499 aa23.94■■□□□ 1.42
GTF3C1-211ENST00000569653 DISP1Q96F81 1524 aa23.93■■□□□ 1.42
GTF3C1-211ENST00000569653 PTPRGP23470 1445 aa23.9■■□□□ 1.42
GTF3C1-211ENST00000569653 TNIKQ9UKE5 1360 aa23.88■■□□□ 1.41
GTF3C1-211ENST00000569653 UGGT2Q9NYU1 1516 aa23.86■■□□□ 1.41
GTF3C1-211ENST00000569653 CARMIL2Q6F5E8 1435 aa23.85■■□□□ 1.41
GTF3C1-211ENST00000569653 TTBK1Q5TCY1 1321 aaPredicted RBP23.84■■□□□ 1.41
GTF3C1-211ENST00000569653 FAM69CQ0P6D2 419 aa23.84■■□□□ 1.41
GTF3C1-211ENST00000569653 CTTNBP2Q8WZ74 1663 aa23.83■■□□□ 1.41
GTF3C1-211ENST00000569653 NPM1P06748 294 aaKnown RBP eCLIP23.83■■□□□ 1.41
GTF3C1-211ENST00000569653 KIAA0556O60303 1618 aa23.82■■□□□ 1.4
GTF3C1-211ENST00000569653 ABCC2Q92887 1545 aa23.81■■□□□ 1.4
GTF3C1-211ENST00000569653 TSPOAP1O95153 1857 aa23.8■■□□□ 1.4
GTF3C1-211ENST00000569653 UHRF1BP1LA0JNW5 1464 aa23.78■■□□□ 1.4
GTF3C1-211ENST00000569653 PRXQ9BXM0 1461 aa23.78■■□□□ 1.4
GTF3C1-211ENST00000569653 UACAQ9BZF9 1416 aa23.75■■□□□ 1.39
GTF3C1-211ENST00000569653 ASXL2Q76L83 1435 aa23.72■■□□□ 1.39
GTF3C1-211ENST00000569653 PPRC1Q5VV67 1664 aaKnown RBP23.72■■□□□ 1.39
GTF3C1-211ENST00000569653 ZCCHC11Q5TAX3 1644 aaKnown RBP23.7■■□□□ 1.38
GTF3C1-211ENST00000569653 KDM5BQ9UGL1 1544 aa23.69■■□□□ 1.38
GTF3C1-211ENST00000569653 GLI2P10070 1586 aa23.66■■□□□ 1.38
GTF3C1-211ENST00000569653 PLB1Q6P1J6 1458 aa23.65■■□□□ 1.38
GTF3C1-211ENST00000569653 KDM6BO15054 1643 aa23.65■■□□□ 1.38
GTF3C1-211ENST00000569653 ABCA8O94911 1581 aa23.61■■□□□ 1.37
GTF3C1-211ENST00000569653 EPRSP07814 1512 aaKnown RBP23.6■■□□□ 1.37
GTF3C1-211ENST00000569653 MAP3K4Q9Y6R4 1608 aa23.59■■□□□ 1.37
GTF3C1-211ENST00000569653 GOLGA3Q08378 1498 aa23.57■■□□□ 1.36
GTF3C1-211ENST00000569653 AEBP2Q6ZN18 517 aaPredicted RBP23.55■■□□□ 1.36
GTF3C1-211ENST00000569653 CSRNP3Q8WYN3 585 aa23.52■■□□□ 1.36
GTF3C1-211ENST00000569653 SAMD9Q5K651 1589 aa23.51■■□□□ 1.35
GTF3C1-211ENST00000569653 COL17A1Q9UMD9 1497 aaPredicted RBP23.5■■□□□ 1.35
GTF3C1-211ENST00000569653 WDR7Q9Y4E6 1490 aa23.5■■□□□ 1.35
GTF3C1-211ENST00000569653 P3H3Q8IVL6 736 aa23.44■■□□□ 1.34
GTF3C1-211ENST00000569653 EEA1Q15075 1411 aa23.42■■□□□ 1.34
GTF3C1-211ENST00000569653 KDM4FA0A1W2PPD8 638 aa23.39■■□□□ 1.33
GTF3C1-211ENST00000569653 CFAP43Q8NDM7 1665 aa23.38■■□□□ 1.33
GTF3C1-211ENST00000569653 ATP10BO94823 1461 aa23.37■■□□□ 1.33
GTF3C1-211ENST00000569653 FAM9AQ8IZU1 332 aaPredicted RBP23.37■■□□□ 1.33
GTF3C1-211ENST00000569653 KIF21BO75037 1637 aa23.36■■□□□ 1.33
GTF3C1-211ENST00000569653 TEX14Q8IWB6 1497 aa23.36■■□□□ 1.33
GTF3C1-211ENST00000569653 RAPGEF6Q8TEU7 1601 aa23.35■■□□□ 1.33
GTF3C1-211ENST00000569653 ARID3CA6NKF2 412 aa23.35■■□□□ 1.33
GTF3C1-211ENST00000569653 KCNH8Q96L42 1107 aa23.32■■□□□ 1.32
GTF3C1-211ENST00000569653 MAGI3Q5TCQ9 1506 aa23.32■■□□□ 1.32
GTF3C1-211ENST00000569653 FHOD3Q2V2M9 1422 aa23.31■■□□□ 1.32
GTF3C1-211ENST00000569653 CD109Q6YHK3 1445 aa23.31■■□□□ 1.32
GTF3C1-211ENST00000569653 NUP153P49790 1475 aaKnown RBP23.28■■□□□ 1.32
GTF3C1-211ENST00000569653 RANGAP1P46060 587 aaPredicted RBP23.27■■□□□ 1.32
GTF3C1-211ENST00000569653 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
GTF3C1-211ENST00000569653 ABCA9Q8IUA7 1624 aa23.25■■□□□ 1.31
GTF3C1-211ENST00000569653 ADGRL1O94910 1474 aa23.23■■□□□ 1.31
GTF3C1-211ENST00000569653 EFCAB5A4FU69 1503 aa23.2■■□□□ 1.3
GTF3C1-211ENST00000569653 ARAP3Q8WWN8 1544 aa23.14■■□□□ 1.3
GTF3C1-211ENST00000569653 EHMT2Q96KQ7 1210 aa23.14■■□□□ 1.29
GTF3C1-211ENST00000569653 CDK13Q14004 1512 aaKnown RBP23.08■■□□□ 1.29
GTF3C1-211ENST00000569653 ARHGAP35Q9NRY4 1499 aa23.08■■□□□ 1.29
GTF3C1-211ENST00000569653 FRMPD1Q5SYB0 1578 aa23.08■■□□□ 1.29
GTF3C1-211ENST00000569653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.06■■□□□ 1.28
GTF3C1-211ENST00000569653 HNRNPUL2Q1KMD3 747 aaKnown RBP23.06■■□□□ 1.28
GTF3C1-211ENST00000569653 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
GTF3C1-211ENST00000569653 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.04■■□□□ 1.28
GTF3C1-211ENST00000569653 NEO1Q92859 1461 aa23.04■■□□□ 1.28
GTF3C1-211ENST00000569653 UBTFP17480 764 aaKnown RBP23.02■■□□□ 1.28
GTF3C1-211ENST00000569653 LRRIQ1Q96JM4 1722 aa23.01■■□□□ 1.27
GTF3C1-211ENST00000569653 RAPGEF3O95398 923 aa22.99■■□□□ 1.27
GTF3C1-211ENST00000569653 PHLDB1Q86UU1 1377 aa22.99■■□□□ 1.27
GTF3C1-211ENST00000569653 RICTORQ6R327 1708 aa22.97■■□□□ 1.27
GTF3C1-211ENST00000569653 PLEKHD1A6NEE1 506 aa22.96■■□□□ 1.27
GTF3C1-211ENST00000569653 HECW1Q76N89 1606 aa22.96■■□□□ 1.27
GTF3C1-211ENST00000569653 FMN1Q68DA7 1419 aa22.93■■□□□ 1.26
GTF3C1-211ENST00000569653 FANCAO15360 1455 aa22.92■■□□□ 1.26
GTF3C1-211ENST00000569653 ADAMTSL3P82987 1691 aa22.91■■□□□ 1.26
GTF3C1-211ENST00000569653 KIF14Q15058 1648 aa22.91■■□□□ 1.26
GTF3C1-211ENST00000569653 AKNAQ7Z591 1439 aa22.91■■□□□ 1.26
GTF3C1-211ENST00000569653 CFAP74Q9C0B2 1584 aa22.89■■□□□ 1.26
GTF3C1-211ENST00000569653 HECW2Q9P2P5 1572 aa22.89■■□□□ 1.26
GTF3C1-211ENST00000569653 SIGLEC1Q9BZZ2 1709 aa22.88■■□□□ 1.25
GTF3C1-211ENST00000569653 ARHGEF40Q8TER5 1519 aa22.88■■□□□ 1.25
GTF3C1-211ENST00000569653 DENND4BO75064 1496 aaPredicted RBP22.86■■□□□ 1.25
GTF3C1-211ENST00000569653 PCF11O94913 1555 aaKnown RBP22.86■■□□□ 1.25
GTF3C1-211ENST00000569653 BCORL1Q5H9F3 1711 aa22.85■■□□□ 1.25
GTF3C1-211ENST00000569653 MYO5CQ9NQX4 1742 aa22.85■■□□□ 1.25
GTF3C1-211ENST00000569653 ZMYM4Q5VZL5 1548 aa22.84■■□□□ 1.25
GTF3C1-211ENST00000569653 ATP1B4Q9UN42 357 aaPredicted RBP22.83■■□□□ 1.25
GTF3C1-211ENST00000569653 PLCH2O75038 1416 aa22.82■■□□□ 1.24
GTF3C1-211ENST00000569653 MADDQ8WXG6 1647 aa22.81■■□□□ 1.24
GTF3C1-211ENST00000569653 TROQ12816 1431 aaPredicted RBP22.8■■□□□ 1.24
GTF3C1-211ENST00000569653 YEATS2Q9ULM3 1422 aa22.8■■□□□ 1.24
GTF3C1-211ENST00000569653 PTPRMP28827 1452 aa22.78■■□□□ 1.24
GTF3C1-211ENST00000569653 POGZQ7Z3K3 1410 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms