RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 URB2Q14146 1524 aaKnown RBP24.98■■□□□ 1.59
VAC14-210ENST00000568548 ABCA10Q8WWZ4 1543 aa24.94■■□□□ 1.58
VAC14-210ENST00000568548 P3H3Q8IVL6 736 aa24.94■■□□□ 1.58
VAC14-210ENST00000568548 ARAP1Q96P48 1450 aa24.92■■□□□ 1.58
VAC14-210ENST00000568548 KIF21AQ7Z4S6 1674 aa24.9■■□□□ 1.58
VAC14-210ENST00000568548 HIRIP3Q9BW71 556 aaPredicted RBP24.89■■□□□ 1.57
VAC14-210ENST00000568548 ARHGAP35Q9NRY4 1499 aa24.82■■□□□ 1.56
VAC14-210ENST00000568548 BCANQ96GW7 911 aa24.81■■□□□ 1.56
VAC14-210ENST00000568548 FAM50AQ14320 339 aaKnown RBP24.8■■□□□ 1.56
VAC14-210ENST00000568548 SIN3AQ96ST3 1273 aa24.79■■□□□ 1.56
VAC14-210ENST00000568548 SUPT16HQ9Y5B9 1047 aaKnown RBP24.79■■□□□ 1.56
VAC14-210ENST00000568548 TDRD9Q8NDG6 1382 aaKnown RBP24.77■■□□□ 1.56
VAC14-210ENST00000568548 WDR97A6NE52 1622 aa24.76■■□□□ 1.55
VAC14-210ENST00000568548 DDX10Q13206 875 aaKnown RBP24.73■■□□□ 1.55
VAC14-210ENST00000568548 CCNB3Q8WWL7 1395 aa24.71■■□□□ 1.55
VAC14-210ENST00000568548 CUL7Q14999 1698 aa24.71■■□□□ 1.55
VAC14-210ENST00000568548 GAPVD1Q14C86 1478 aa24.68■■□□□ 1.54
VAC14-210ENST00000568548 ABCA5Q8WWZ7 1642 aa24.68■■□□□ 1.54
VAC14-210ENST00000568548 RAB3GAP2Q9H2M9 1393 aa24.65■■□□□ 1.54
VAC14-210ENST00000568548 MRC2Q9UBG0 1479 aa24.63■■□□□ 1.53
VAC14-210ENST00000568548 TARBP1Q13395 1621 aaKnown RBP24.62■■□□□ 1.53
VAC14-210ENST00000568548 MYT1Q01538 1121 aa24.62■■□□□ 1.53
VAC14-210ENST00000568548 CLSPNQ9HAW4 1339 aa24.61■■□□□ 1.53
VAC14-210ENST00000568548 RRBP1Q9P2E9 1410 aaKnown RBP24.56■■□□□ 1.52
VAC14-210ENST00000568548 CTTNBP2Q8WZ74 1663 aa24.55■■□□□ 1.52
VAC14-210ENST00000568548 TRIM52Q96A61 297 aa24.53■■□□□ 1.52
VAC14-210ENST00000568548 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.51
VAC14-210ENST00000568548 FHOD3Q2V2M9 1422 aa24.5■■□□□ 1.51
VAC14-210ENST00000568548 FHAD1B1AJZ9 1412 aa24.49■■□□□ 1.51
VAC14-210ENST00000568548 PHLDB1Q86UU1 1377 aa24.49■■□□□ 1.51
VAC14-210ENST00000568548 FKBP8Q14318 412 aa24.48■■□□□ 1.51
VAC14-210ENST00000568548 TSHZ2Q9NRE2 1034 aa24.47■■□□□ 1.51
VAC14-210ENST00000568548 EFCAB5A4FU69 1503 aa24.46■■□□□ 1.51
VAC14-210ENST00000568548 ERCC6Q03468 1493 aa24.45■■□□□ 1.5
VAC14-210ENST00000568548 WDR62O43379 1518 aa24.45■■□□□ 1.5
VAC14-210ENST00000568548 PBRM1Q86U86 1689 aa24.44■■□□□ 1.5
VAC14-210ENST00000568548 TIAM1Q13009 1591 aa24.44■■□□□ 1.5
VAC14-210ENST00000568548 PCF11O94913 1555 aaKnown RBP24.42■■□□□ 1.5
VAC14-210ENST00000568548 MAP3K1Q13233 1512 aa24.41■■□□□ 1.5
VAC14-210ENST00000568548 IFT140Q96RY7 1462 aa24.4■■□□□ 1.5
VAC14-210ENST00000568548 ZNF608Q9ULD9 1512 aaPredicted RBP24.39■■□□□ 1.5
VAC14-210ENST00000568548 SETD5Q9C0A6 1442 aa24.38■■□□□ 1.49
VAC14-210ENST00000568548 MAPKBP1O60336 1514 aa24.37■■□□□ 1.49
VAC14-210ENST00000568548 GRIN2BQ13224 1484 aa24.36■■□□□ 1.49
VAC14-210ENST00000568548 LRRC9Q6ZRR7 1453 aa24.36■■□□□ 1.49
VAC14-210ENST00000568548 ADAMTS12P58397 1594 aa24.33■■□□□ 1.49
VAC14-210ENST00000568548 CASKIN1Q8WXD9 1431 aa24.33■■□□□ 1.49
VAC14-210ENST00000568548 FYCO1Q9BQS8 1478 aa24.33■■□□□ 1.48
VAC14-210ENST00000568548 FMN1Q68DA7 1419 aa24.32■■□□□ 1.48
VAC14-210ENST00000568548 ARID3CA6NKF2 412 aa24.31■■□□□ 1.48
VAC14-210ENST00000568548 SAMD9Q5K651 1589 aa24.31■■□□□ 1.48
VAC14-210ENST00000568548 CFAP43Q8NDM7 1665 aa24.3■■□□□ 1.48
VAC14-210ENST00000568548 THOC2Q8NI27 1593 aaKnown RBP24.27■■□□□ 1.48
VAC14-210ENST00000568548 PPP1R15AO75807 674 aaPredicted RBP24.25■■□□□ 1.47
VAC14-210ENST00000568548 IRX6P78412 446 aaPredicted RBP24.25■■□□□ 1.47
VAC14-210ENST00000568548 SNAPC4Q5SXM2 1469 aa24.24■■□□□ 1.47
VAC14-210ENST00000568548 CHIC2Q9UKJ5 165 aa24.23■■□□□ 1.47
VAC14-210ENST00000568548 EIF4G3O43432 1585 aaKnown RBP24.22■■□□□ 1.47
VAC14-210ENST00000568548 ANP32CO43423 234 aa24.21■■□□□ 1.47
VAC14-210ENST00000568548 IQGAP2Q13576 1575 aa24.21■■□□□ 1.47
VAC14-210ENST00000568548 CNGB1Q14028 1251 aaPredicted RBP24.18■■□□□ 1.46
VAC14-210ENST00000568548 NEFLP07196 543 aa24.17■■□□□ 1.46
VAC14-210ENST00000568548 RRP7BPQ9NSQ0 103 aa24.15■■□□□ 1.46
VAC14-210ENST00000568548 TONSLQ96HA7 1378 aa24.13■■□□□ 1.45
VAC14-210ENST00000568548 LRRIQ1Q96JM4 1722 aa24.12■■□□□ 1.45
VAC14-210ENST00000568548 MTUS2Q5JR59 1369 aa24.11■■□□□ 1.45
VAC14-210ENST00000568548 GRIN2AQ12879 1464 aa24.1■■□□□ 1.45
VAC14-210ENST00000568548 ANP32EQ9BTT0 268 aa24.09■■□□□ 1.45
VAC14-210ENST00000568548 FOXD1Q16676 465 aa24.08■■□□□ 1.45
VAC14-210ENST00000568548 CHMP7Q8WUX9 453 aaPredicted RBP24.07■■□□□ 1.44
VAC14-210ENST00000568548 KIAA0586Q9BVV6 1533 aa24.06■■□□□ 1.44
VAC14-210ENST00000568548 FBLN2P98095 1184 aa24.06■■□□□ 1.44
VAC14-210ENST00000568548 MAGI1Q96QZ7 1491 aaPredicted RBP24.06■■□□□ 1.44
VAC14-210ENST00000568548 HNRNPUQ00839 825 aaKnown RBP eCLIP24.06■■□□□ 1.44
VAC14-210ENST00000568548 UGGT2Q9NYU1 1516 aa24.05■■□□□ 1.44
VAC14-210ENST00000568548 SENP3-EIF4A1A0A087X0R7 540 aa24.04■■□□□ 1.44
VAC14-210ENST00000568548 PTPRKQ15262 1439 aa24.03■■□□□ 1.44
VAC14-210ENST00000568548 SYNJ2O15056 1496 aa24.01■■□□□ 1.43
VAC14-210ENST00000568548 RBM19Q9Y4C8 960 aaKnown RBP24■■□□□ 1.43
VAC14-210ENST00000568548 HECW1Q76N89 1606 aa23.97■■□□□ 1.43
VAC14-210ENST00000568548 CCDC18Q5T9S5 1454 aa23.97■■□□□ 1.43
VAC14-210ENST00000568548 DISP1Q96F81 1524 aa23.97■■□□□ 1.43
VAC14-210ENST00000568548 FGD6Q6ZV73 1430 aa23.97■■□□□ 1.43
VAC14-210ENST00000568548 NCOA2Q15596 1464 aa23.96■■□□□ 1.43
VAC14-210ENST00000568548 CCDC184Q52MB2 194 aa23.96■■□□□ 1.43
VAC14-210ENST00000568548 KIAA0556O60303 1618 aa23.95■■□□□ 1.42
VAC14-210ENST00000568548 EHBP1L1Q8N3D4 1523 aa23.94■■□□□ 1.42
VAC14-210ENST00000568548 CEP170Q5SW79 1584 aa23.94■■□□□ 1.42
VAC14-210ENST00000568548 EPRSP07814 1512 aaKnown RBP23.94■■□□□ 1.42
VAC14-210ENST00000568548 MAGI3Q5TCQ9 1506 aa23.94■■□□□ 1.42
VAC14-210ENST00000568548 SUPT6HQ7KZ85 1726 aaKnown RBP23.93■■□□□ 1.42
VAC14-210ENST00000568548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.92■■□□□ 1.42
VAC14-210ENST00000568548 CCER2I3L3R5 266 aa23.91■■□□□ 1.42
VAC14-210ENST00000568548 CDK13Q14004 1512 aaKnown RBP23.91■■□□□ 1.42
VAC14-210ENST00000568548 HSPA5P11021 654 aaKnown RBP23.9■■□□□ 1.42
VAC14-210ENST00000568548 MYOM3Q5VTT5 1437 aa23.89■■□□□ 1.41
VAC14-210ENST00000568548 FAM9BQ8IZU0 186 aa23.89■■□□□ 1.41
VAC14-210ENST00000568548 TIMELESSQ9UNS1 1208 aa23.88■■□□□ 1.41
VAC14-210ENST00000568548 POLR3GLQ9BT43 218 aa23.87■■□□□ 1.41
VAC14-210ENST00000568548 WASHC2AQ641Q2 1341 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms