RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 NISCHQ9Y2I1 1504 aa35.35■■■■□ 3.25
VAC14-210ENST00000568548 CCDC180Q9P1Z9 1646 aa30.42■■■□□ 2.46
VAC14-210ENST00000568548 SHROOM4Q9ULL8 1493 aa30.28■■■□□ 2.44
VAC14-210ENST00000568548 SUPT5HO00267 1087 aaKnown RBP29.87■■■□□ 2.37
VAC14-210ENST00000568548 ZCCHC6Q5VYS8 1495 aaKnown RBP29.77■■■□□ 2.36
VAC14-210ENST00000568548 DCAF8L2P0C7V8 631 aa29.42■■■□□ 2.3
VAC14-210ENST00000568548 DCAF1Q9Y4B6 1507 aa29.06■■■□□ 2.24
VAC14-210ENST00000568548 CHIC1Q5VXU3 224 aa28.73■■■□□ 2.19
VAC14-210ENST00000568548 MYO15BQ96JP2 1530 aa28.69■■■□□ 2.18
VAC14-210ENST00000568548 ABCC9O60706 1549 aa28.63■■■□□ 2.17
VAC14-210ENST00000568548 PCGF6Q9BYE7 350 aa28.59■■■□□ 2.17
VAC14-210ENST00000568548 HRCP23327 699 aa28.37■■■□□ 2.13
VAC14-210ENST00000568548 LOC105371045A0A1W2PR82 267 aa28.36■■■□□ 2.13
VAC14-210ENST00000568548 PPARGC1BQ86YN6 1023 aaKnown RBP28.34■■■□□ 2.13
VAC14-210ENST00000568548 SCRIBQ14160 1630 aa28.31■■■□□ 2.12
VAC14-210ENST00000568548 NACADO15069 1562 aa28.27■■■□□ 2.12
VAC14-210ENST00000568548 EHMT2Q96KQ7 1210 aa27.95■■■□□ 2.07
VAC14-210ENST00000568548 RB1CC1Q8TDY2 1594 aa27.94■■■□□ 2.06
VAC14-210ENST00000568548 FAM9AQ8IZU1 332 aaPredicted RBP27.77■■■□□ 2.04
VAC14-210ENST00000568548 RSF1Q96T23 1441 aaPredicted RBP27.69■■■□□ 2.02
VAC14-210ENST00000568548 CECR2Q9BXF3 1484 aa27.56■■■□□ 2
VAC14-210ENST00000568548 UNC13AQ9UPW8 1703 aa27.47■■□□□ 1.99
VAC14-210ENST00000568548 TRIM26Q12899 539 aaPredicted RBP27.47■■□□□ 1.99
VAC14-210ENST00000568548 TRIM41Q8WV44 630 aa27.45■■□□□ 1.99
VAC14-210ENST00000568548 MROH2BQ7Z745 1585 aa27.41■■□□□ 1.98
VAC14-210ENST00000568548 WIZO95785 1651 aa27.23■■□□□ 1.95
VAC14-210ENST00000568548 PABPN1Q86U42 306 aaKnown RBP eCLIP27.22■■□□□ 1.95
VAC14-210ENST00000568548 BAZ1AQ9NRL2 1556 aaPredicted RBP27.22■■□□□ 1.95
VAC14-210ENST00000568548 BICRAQ9NZM4 1560 aa27.15■■□□□ 1.94
VAC14-210ENST00000568548 SMARCA4P51532 1647 aa27.06■■□□□ 1.92
VAC14-210ENST00000568548 TTBK1Q5TCY1 1321 aaPredicted RBP27.03■■□□□ 1.92
VAC14-210ENST00000568548 TOP2AP11388 1531 aaKnown RBP26.84■■□□□ 1.89
VAC14-210ENST00000568548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.8■■□□□ 1.88
VAC14-210ENST00000568548 ZEB1P37275 1124 aaPredicted RBP26.73■■□□□ 1.87
VAC14-210ENST00000568548 CCDC88BA6NC98 1476 aa26.68■■□□□ 1.86
VAC14-210ENST00000568548 SMARCA2P51531 1590 aa26.65■■□□□ 1.86
VAC14-210ENST00000568548 PEG3Q9GZU2 1588 aa26.6■■□□□ 1.85
VAC14-210ENST00000568548 CCER1Q8TC90 406 aaPredicted RBP26.59■■□□□ 1.85
VAC14-210ENST00000568548 SCAF1Q9H7N4 1312 aaKnown RBP26.59■■□□□ 1.85
VAC14-210ENST00000568548 EIF4G1Q04637 1599 aaKnown RBP26.58■■□□□ 1.85
VAC14-210ENST00000568548 ATAD2BQ9ULI0 1458 aa26.51■■□□□ 1.84
VAC14-210ENST00000568548 BAZ1BQ9UIG0 1483 aaKnown RBP26.41■■□□□ 1.82
VAC14-210ENST00000568548 ABCC8Q09428 1581 aa26.37■■□□□ 1.81
VAC14-210ENST00000568548 UBTFP17480 764 aaKnown RBP26.25■■□□□ 1.79
VAC14-210ENST00000568548 RANGAP1P46060 587 aaPredicted RBP26.22■■□□□ 1.79
VAC14-210ENST00000568548 NEUROD1Q13562 356 aa26.2■■□□□ 1.79
VAC14-210ENST00000568548 DIEXFQ68CQ4 756 aaKnown RBP26.15■■□□□ 1.78
VAC14-210ENST00000568548 NCAPD3P42695 1498 aa26.14■■□□□ 1.77
VAC14-210ENST00000568548 SOGA1O94964 1423 aa26.13■■□□□ 1.77
VAC14-210ENST00000568548 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
VAC14-210ENST00000568548 WRNQ14191 1432 aaPredicted RBP eCLIP26.05■■□□□ 1.76
VAC14-210ENST00000568548 RUSC2Q8N2Y8 1516 aa26.04■■□□□ 1.76
VAC14-210ENST00000568548 HNRNPUL2Q1KMD3 747 aaKnown RBP26.03■■□□□ 1.76
VAC14-210ENST00000568548 YTHDC1Q96MU7 727 aaKnown RBP26.03■■□□□ 1.76
VAC14-210ENST00000568548 ACIN1Q9UKV3 1341 aaKnown RBP26.03■■□□□ 1.76
VAC14-210ENST00000568548 CEP162Q5TB80 1403 aa25.99■■□□□ 1.75
VAC14-210ENST00000568548 PELP1Q8IZL8 1130 aaKnown RBP25.99■■□□□ 1.75
VAC14-210ENST00000568548 GTF3C3Q9Y5Q9 886 aa25.99■■□□□ 1.75
VAC14-210ENST00000568548 CSRNP3Q8WYN3 585 aa25.97■■□□□ 1.75
VAC14-210ENST00000568548 SYNJ1O43426 1573 aa25.93■■□□□ 1.74
VAC14-210ENST00000568548 EEA1Q15075 1411 aa25.83■■□□□ 1.72
VAC14-210ENST00000568548 CC2D2AQ9P2K1 1620 aa25.82■■□□□ 1.72
VAC14-210ENST00000568548 CENPBP07199 599 aaPredicted RBP25.8■■□□□ 1.72
VAC14-210ENST00000568548 CFTRP13569 1480 aa25.73■■□□□ 1.71
VAC14-210ENST00000568548 TNIKQ9UKE5 1360 aa25.73■■□□□ 1.71
VAC14-210ENST00000568548 ZNF316A6NFI3 1004 aaPredicted RBP25.7■■□□□ 1.7
VAC14-210ENST00000568548 TOP2BQ02880 1626 aa25.7■■□□□ 1.7
VAC14-210ENST00000568548 MIER1Q8N108 512 aa25.65■■□□□ 1.7
VAC14-210ENST00000568548 BIVM-ERCC5R4GMW8 1640 aa25.62■■□□□ 1.69
VAC14-210ENST00000568548 GOLGA3Q08378 1498 aa25.59■■□□□ 1.69
VAC14-210ENST00000568548 CADPSQ9ULU8 1353 aa25.58■■□□□ 1.69
VAC14-210ENST00000568548 CUX1P39880 1505 aa25.57■■□□□ 1.68
VAC14-210ENST00000568548 APLP2Q06481 763 aa25.57■■□□□ 1.68
VAC14-210ENST00000568548 PRDM2Q13029 1718 aa25.52■■□□□ 1.68
VAC14-210ENST00000568548 CEP164Q9UPV0 1460 aa25.52■■□□□ 1.68
VAC14-210ENST00000568548 KIF21BO75037 1637 aa25.48■■□□□ 1.67
VAC14-210ENST00000568548 CLIP1P30622 1438 aa25.45■■□□□ 1.67
VAC14-210ENST00000568548 RAPGEF2Q9Y4G8 1499 aa25.4■■□□□ 1.66
VAC14-210ENST00000568548 ITGAEP38570 1179 aa25.39■■□□□ 1.66
VAC14-210ENST00000568548 KIF27Q86VH2 1401 aa25.32■■□□□ 1.64
VAC14-210ENST00000568548 FANCD2Q9BXW9 1451 aa25.32■■□□□ 1.64
VAC14-210ENST00000568548 NESP48681 1621 aa25.31■■□□□ 1.64
VAC14-210ENST00000568548 KANK4Q5T7N3 995 aaPredicted RBP25.28■■□□□ 1.64
VAC14-210ENST00000568548 DNAJC5BQ9UF47 199 aa25.26■■□□□ 1.63
VAC14-210ENST00000568548 PRXQ9BXM0 1461 aa25.26■■□□□ 1.63
VAC14-210ENST00000568548 FGD5Q6ZNL6 1462 aa25.23■■□□□ 1.63
VAC14-210ENST00000568548 VPS8Q8N3P4 1428 aa25.21■■□□□ 1.63
VAC14-210ENST00000568548 ERICH3Q5RHP9 1530 aa25.2■■□□□ 1.63
VAC14-210ENST00000568548 CUX2O14529 1486 aa25.19■■□□□ 1.62
VAC14-210ENST00000568548 LAMC3Q9Y6N6 1575 aa25.14■■□□□ 1.61
VAC14-210ENST00000568548 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
VAC14-210ENST00000568548 IGF1RP08069 1367 aa25.09■■□□□ 1.61
VAC14-210ENST00000568548 TOPBP1Q92547 1522 aa25.08■■□□□ 1.61
VAC14-210ENST00000568548 RAD54L2Q9Y4B4 1467 aa25.03■■□□□ 1.6
VAC14-210ENST00000568548 POLA1P09884 1462 aaPredicted RBP25.02■■□□□ 1.6
VAC14-210ENST00000568548 PDS5BQ9NTI5 1447 aa25■■□□□ 1.59
VAC14-210ENST00000568548 ATP1B4Q9UN42 357 aaPredicted RBP24.99■■□□□ 1.59
VAC14-210ENST00000568548 KCNH8Q96L42 1107 aa24.99■■□□□ 1.59
VAC14-210ENST00000568548 DHX57Q6P158 1386 aaKnown RBP24.98■■□□□ 1.59
VAC14-210ENST00000568548 CARMIL1Q5VZK9 1371 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms