RNA–Protein interactions for RNA: ENST00000568176.5

EDC3-214, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 1,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-214ENST00000568176 CEP162Q5TB80 1403 aa29.9■■■□□ 2.38
EDC3-214ENST00000568176 CEP170Q5SW79 1584 aa29.87■■■□□ 2.37
EDC3-214ENST00000568176 RANGAP1P46060 587 aaPredicted RBP29.85■■■□□ 2.37
EDC3-214ENST00000568176 NUP160Q12769 1436 aa29.81■■■□□ 2.36
EDC3-214ENST00000568176 CLIP1P30622 1438 aa29.77■■■□□ 2.36
EDC3-214ENST00000568176 IQGAP2Q13576 1575 aa29.74■■■□□ 2.35
EDC3-214ENST00000568176 KIAA0586Q9BVV6 1533 aa29.74■■■□□ 2.35
EDC3-214ENST00000568176 ARHGAP35Q9NRY4 1499 aa29.68■■■□□ 2.34
EDC3-214ENST00000568176 ARAP1Q96P48 1450 aa29.6■■■□□ 2.33
EDC3-214ENST00000568176 UGGT2Q9NYU1 1516 aa29.6■■■□□ 2.33
EDC3-214ENST00000568176 SAMD9Q5K651 1589 aa29.6■■■□□ 2.33
EDC3-214ENST00000568176 CLASP1Q7Z460 1538 aa29.57■■■□□ 2.32
EDC3-214ENST00000568176 P3H3Q8IVL6 736 aa29.57■■■□□ 2.32
EDC3-214ENST00000568176 EFCAB5A4FU69 1503 aa29.56■■■□□ 2.32
EDC3-214ENST00000568176 JPH4Q96JJ6 628 aa29.53■■■□□ 2.32
EDC3-214ENST00000568176 FHOD3Q2V2M9 1422 aa29.52■■■□□ 2.32
EDC3-214ENST00000568176 DISP1Q96F81 1524 aa29.51■■■□□ 2.32
EDC3-214ENST00000568176 SHROOM2Q13796 1616 aa29.49■■■□□ 2.31
EDC3-214ENST00000568176 KIAA0556O60303 1618 aa29.46■■■□□ 2.31
EDC3-214ENST00000568176 OSCARQ8IYS5 282 aa29.45■■■□□ 2.3
EDC3-214ENST00000568176 VPS8Q8N3P4 1428 aa29.43■■■□□ 2.3
EDC3-214ENST00000568176 PRG4Q92954 1404 aaPredicted RBP29.4■■■□□ 2.3
EDC3-214ENST00000568176 ERCC6L2Q5T890 1561 aa29.38■■■□□ 2.29
EDC3-214ENST00000568176 CARMIL2Q6F5E8 1435 aa29.33■■■□□ 2.29
EDC3-214ENST00000568176 PCF11O94913 1555 aaKnown RBP29.28■■■□□ 2.28
EDC3-214ENST00000568176 TTBK1Q5TCY1 1321 aaPredicted RBP29.28■■■□□ 2.28
EDC3-214ENST00000568176 FMN1Q68DA7 1419 aa29.27■■■□□ 2.28
EDC3-214ENST00000568176 CASKIN1Q8WXD9 1431 aa29.2■■■□□ 2.26
EDC3-214ENST00000568176 FYCO1Q9BQS8 1478 aa29.17■■■□□ 2.26
EDC3-214ENST00000568176 LRRIQ1Q96JM4 1722 aa29.15■■■□□ 2.26
EDC3-214ENST00000568176 PTPRGP23470 1445 aa29.14■■■□□ 2.26
EDC3-214ENST00000568176 PPARGC1BQ86YN6 1023 aaKnown RBP29.14■■■□□ 2.26
EDC3-214ENST00000568176 PLB1Q6P1J6 1458 aa29.14■■■□□ 2.26
EDC3-214ENST00000568176 ATP1B4Q9UN42 357 aaPredicted RBP29.13■■■□□ 2.25
EDC3-214ENST00000568176 RAPGEF6Q8TEU7 1601 aa29.11■■■□□ 2.25
EDC3-214ENST00000568176 ABCA8O94911 1581 aa29.08■■■□□ 2.25
EDC3-214ENST00000568176 HECW1Q76N89 1606 aa29.06■■■□□ 2.24
EDC3-214ENST00000568176 NUP153P49790 1475 aaKnown RBP29.05■■■□□ 2.24
EDC3-214ENST00000568176 TIAM1Q13009 1591 aa29.03■■■□□ 2.24
EDC3-214ENST00000568176 ARHGEF11O15085 1522 aa29.03■■■□□ 2.24
EDC3-214ENST00000568176 CFAP43Q8NDM7 1665 aa29.02■■■□□ 2.24
EDC3-214ENST00000568176 APLP2Q06481 763 aa29.01■■■□□ 2.24
EDC3-214ENST00000568176 ARID3CA6NKF2 412 aa29.01■■■□□ 2.23
EDC3-214ENST00000568176 KANK4Q5T7N3 995 aaPredicted RBP29■■■□□ 2.23
EDC3-214ENST00000568176 EPRSP07814 1512 aaKnown RBP28.99■■■□□ 2.23
EDC3-214ENST00000568176 CDK13Q14004 1512 aaKnown RBP28.99■■■□□ 2.23
EDC3-214ENST00000568176 MAP3K1Q13233 1512 aa28.98■■■□□ 2.23
EDC3-214ENST00000568176 UACAQ9BZF9 1416 aa28.97■■■□□ 2.23
EDC3-214ENST00000568176 RIMBP3CA6NJZ7 1639 aa28.95■■■□□ 2.23
EDC3-214ENST00000568176 RIMBP3BA6NNM3 1639 aa28.95■■■□□ 2.23
EDC3-214ENST00000568176 RIMBP3Q9UFD9 1639 aa28.95■■■□□ 2.23
EDC3-214ENST00000568176 CCDC18Q5T9S5 1454 aa28.92■■■□□ 2.22
EDC3-214ENST00000568176 ABCC2Q92887 1545 aa28.92■■■□□ 2.22
EDC3-214ENST00000568176 LRRC9Q6ZRR7 1453 aa28.89■■■□□ 2.22
EDC3-214ENST00000568176 MAGI3Q5TCQ9 1506 aa28.88■■■□□ 2.21
EDC3-214ENST00000568176 ATP10BO94823 1461 aa28.87■■■□□ 2.21
EDC3-214ENST00000568176 ADCY10Q96PN6 1610 aa28.87■■■□□ 2.21
EDC3-214ENST00000568176 UHRF1BP1LA0JNW5 1464 aa28.85■■■□□ 2.21
EDC3-214ENST00000568176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.79■■■□□ 2.2
EDC3-214ENST00000568176 HNRNPUL2Q1KMD3 747 aaKnown RBP28.79■■■□□ 2.2
EDC3-214ENST00000568176 MTUS2Q5JR59 1369 aa28.76■■■□□ 2.2
EDC3-214ENST00000568176 ZCCHC11Q5TAX3 1644 aaKnown RBP28.76■■■□□ 2.19
EDC3-214ENST00000568176 KDM5BQ9UGL1 1544 aa28.76■■■□□ 2.19
EDC3-214ENST00000568176 CYB5RLQ6IPT4 315 aa28.74■■■□□ 2.19
EDC3-214ENST00000568176 EHBP1L1Q8N3D4 1523 aa28.74■■■□□ 2.19
EDC3-214ENST00000568176 TROQ12816 1431 aaPredicted RBP28.66■■■□□ 2.18
EDC3-214ENST00000568176 CDK11AQ9UQ88 783 aaPredicted RBP28.66■■■□□ 2.18
EDC3-214ENST00000568176 SUPT6HQ7KZ85 1726 aaKnown RBP28.65■■■□□ 2.18
EDC3-214ENST00000568176 NCOA2Q15596 1464 aa28.64■■■□□ 2.17
EDC3-214ENST00000568176 PHLDB1Q86UU1 1377 aa28.63■■■□□ 2.17
EDC3-214ENST00000568176 KIF14Q15058 1648 aa28.63■■■□□ 2.17
EDC3-214ENST00000568176 PLEKHD1A6NEE1 506 aa28.62■■■□□ 2.17
EDC3-214ENST00000568176 TRIM26Q12899 539 aaPredicted RBP28.59■■■□□ 2.17
EDC3-214ENST00000568176 ASXL2Q76L83 1435 aa28.51■■■□□ 2.15
EDC3-214ENST00000568176 NPM1P06748 294 aaKnown RBP eCLIP28.5■■■□□ 2.15
EDC3-214ENST00000568176 DNAJC5Q9H3Z4 198 aa28.5■■■□□ 2.15
EDC3-214ENST00000568176 ABCC10Q5T3U5 1492 aa28.49■■■□□ 2.15
EDC3-214ENST00000568176 WDR7Q9Y4E6 1490 aa28.49■■■□□ 2.15
EDC3-214ENST00000568176 PCGF6Q9BYE7 350 aa28.49■■■□□ 2.15
EDC3-214ENST00000568176 RRBP1Q9P2E9 1410 aaKnown RBP28.48■■■□□ 2.15
EDC3-214ENST00000568176 KCNH8Q96L42 1107 aa28.48■■■□□ 2.15
EDC3-214ENST00000568176 MYOM3Q5VTT5 1437 aa28.47■■■□□ 2.15
EDC3-214ENST00000568176 TTC37Q6PGP7 1564 aa28.44■■■□□ 2.14
EDC3-214ENST00000568176 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.44■■■□□ 2.14
EDC3-214ENST00000568176 FGD6Q6ZV73 1430 aa28.42■■■□□ 2.14
EDC3-214ENST00000568176 CDC42BPAQ5VT25 1732 aa28.42■■■□□ 2.14
EDC3-214ENST00000568176 CCNB3Q8WWL7 1395 aa28.41■■■□□ 2.14
EDC3-214ENST00000568176 GPATCH8Q9UKJ3 1502 aaKnown RBP28.41■■■□□ 2.14
EDC3-214ENST00000568176 MAPKBP1O60336 1514 aa28.4■■■□□ 2.14
EDC3-214ENST00000568176 ITSN2Q9NZM3 1697 aa28.35■■■□□ 2.13
EDC3-214ENST00000568176 PTPN23Q9H3S7 1636 aa28.34■■■□□ 2.13
EDC3-214ENST00000568176 CDC42BPBQ9Y5S2 1711 aa28.33■■■□□ 2.13
EDC3-214ENST00000568176 PREX2Q70Z35 1606 aa28.31■■■□□ 2.12
EDC3-214ENST00000568176 MIA2Q96PC5 1412 aa28.31■■■□□ 2.12
EDC3-214ENST00000568176 FAM50AQ14320 339 aaKnown RBP28.31■■■□□ 2.12
EDC3-214ENST00000568176 ABCA9Q8IUA7 1624 aa28.31■■■□□ 2.12
EDC3-214ENST00000568176 MYO5CQ9NQX4 1742 aa28.3■■■□□ 2.12
EDC3-214ENST00000568176 ZNF644Q9H582 1327 aaPredicted RBP28.28■■■□□ 2.12
EDC3-214ENST00000568176 TCOF1Q13428 1488 aaKnown RBP28.28■■■□□ 2.12
EDC3-214ENST00000568176 CFDP1Q9UEE9 299 aaPredicted RBP28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms