RNA–Protein interactions for RNA: ENST00000568176.5

EDC3-214, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 1,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-214ENST00000568176 NISCHQ9Y2I1 1504 aa43.35■■■■■ 4.53
EDC3-214ENST00000568176 CCDC180Q9P1Z9 1646 aa38.03■■■■□ 3.68
EDC3-214ENST00000568176 ABCC9O60706 1549 aa36.45■■■■□ 3.43
EDC3-214ENST00000568176 ZCCHC6Q5VYS8 1495 aaKnown RBP36.32■■■■□ 3.4
EDC3-214ENST00000568176 DCAF8L2P0C7V8 631 aa35.92■■■■□ 3.34
EDC3-214ENST00000568176 DCAF1Q9Y4B6 1507 aa35.81■■■■□ 3.32
EDC3-214ENST00000568176 MYO15BQ96JP2 1530 aa35.56■■■■□ 3.28
EDC3-214ENST00000568176 NACADO15069 1562 aa35.52■■■■□ 3.28
EDC3-214ENST00000568176 RB1CC1Q8TDY2 1594 aa35.33■■■■□ 3.25
EDC3-214ENST00000568176 SHROOM4Q9ULL8 1493 aa35.02■■■■□ 3.2
EDC3-214ENST00000568176 SCRIBQ14160 1630 aa34.93■■■■□ 3.18
EDC3-214ENST00000568176 UNC13AQ9UPW8 1703 aa34.73■■■■□ 3.15
EDC3-214ENST00000568176 BICRAQ9NZM4 1560 aa34.37■■■■□ 3.09
EDC3-214ENST00000568176 PABPN1Q86U42 306 aaKnown RBP eCLIP34.27■■■■□ 3.08
EDC3-214ENST00000568176 CECR2Q9BXF3 1484 aa33.77■■■■□ 3
EDC3-214ENST00000568176 MROH2BQ7Z745 1585 aa33.51■■■□□ 2.95
EDC3-214ENST00000568176 BAZ1AQ9NRL2 1556 aaPredicted RBP33.48■■■□□ 2.95
EDC3-214ENST00000568176 SMARCA4P51532 1647 aa33.44■■■□□ 2.94
EDC3-214ENST00000568176 RSF1Q96T23 1441 aaPredicted RBP33.44■■■□□ 2.94
EDC3-214ENST00000568176 SUPT5HO00267 1087 aaKnown RBP33.39■■■□□ 2.94
EDC3-214ENST00000568176 EIF4G1Q04637 1599 aaKnown RBP33.33■■■□□ 2.93
EDC3-214ENST00000568176 WIZO95785 1651 aa33.22■■■□□ 2.91
EDC3-214ENST00000568176 PEG3Q9GZU2 1588 aa33.05■■■□□ 2.88
EDC3-214ENST00000568176 ATAD2BQ9ULI0 1458 aa33.02■■■□□ 2.88
EDC3-214ENST00000568176 CC2D2AQ9P2K1 1620 aa32.98■■■□□ 2.87
EDC3-214ENST00000568176 SMARCA2P51531 1590 aa32.94■■■□□ 2.86
EDC3-214ENST00000568176 TOP2AP11388 1531 aaKnown RBP32.81■■■□□ 2.84
EDC3-214ENST00000568176 NCAPD3P42695 1498 aa32.8■■■□□ 2.84
EDC3-214ENST00000568176 BAZ1BQ9UIG0 1483 aaKnown RBP32.77■■■□□ 2.84
EDC3-214ENST00000568176 HMGXB3Q12766 1538 aa32.7■■■□□ 2.83
EDC3-214ENST00000568176 DNAJC5BQ9UF47 199 aa32.67■■■□□ 2.82
EDC3-214ENST00000568176 CCDC88BA6NC98 1476 aa32.48■■■□□ 2.79
EDC3-214ENST00000568176 CFTRP13569 1480 aa31.93■■■□□ 2.7
EDC3-214ENST00000568176 CADPSQ9ULU8 1353 aa31.91■■■□□ 2.7
EDC3-214ENST00000568176 NESP48681 1621 aa31.88■■■□□ 2.69
EDC3-214ENST00000568176 PRDM2Q13029 1718 aa31.77■■■□□ 2.68
EDC3-214ENST00000568176 LAMC3Q9Y6N6 1575 aa31.76■■■□□ 2.67
EDC3-214ENST00000568176 CHIC1Q5VXU3 224 aa31.72■■■□□ 2.67
EDC3-214ENST00000568176 ABCC8Q09428 1581 aa31.67■■■□□ 2.66
EDC3-214ENST00000568176 FANCD2Q9BXW9 1451 aa31.57■■■□□ 2.64
EDC3-214ENST00000568176 KIF21AQ7Z4S6 1674 aa31.49■■■□□ 2.63
EDC3-214ENST00000568176 PDS5BQ9NTI5 1447 aa31.48■■■□□ 2.63
EDC3-214ENST00000568176 WRNQ14191 1432 aaPredicted RBP eCLIP31.45■■■□□ 2.62
EDC3-214ENST00000568176 SYNJ1O43426 1573 aa31.41■■■□□ 2.62
EDC3-214ENST00000568176 CEP164Q9UPV0 1460 aa31.4■■■□□ 2.62
EDC3-214ENST00000568176 TRIM41Q8WV44 630 aa31.4■■■□□ 2.62
EDC3-214ENST00000568176 CUX1P39880 1505 aa31.36■■■□□ 2.61
EDC3-214ENST00000568176 TOP2BQ02880 1626 aa31.28■■■□□ 2.6
EDC3-214ENST00000568176 BIVM-ERCC5R4GMW8 1640 aa31.28■■■□□ 2.6
EDC3-214ENST00000568176 URB2Q14146 1524 aaKnown RBP31.25■■■□□ 2.59
EDC3-214ENST00000568176 ERCC6Q03468 1493 aa31.23■■■□□ 2.59
EDC3-214ENST00000568176 DNMBPQ6XZF7 1577 aa31.2■■■□□ 2.58
EDC3-214ENST00000568176 TOPBP1Q92547 1522 aa31.19■■■□□ 2.58
EDC3-214ENST00000568176 MRC2Q9UBG0 1479 aa31.16■■■□□ 2.58
EDC3-214ENST00000568176 THOC2Q8NI27 1593 aaKnown RBP31.09■■■□□ 2.57
EDC3-214ENST00000568176 FGD5Q6ZNL6 1462 aa31.07■■■□□ 2.56
EDC3-214ENST00000568176 WDR62O43379 1518 aa31.03■■■□□ 2.56
EDC3-214ENST00000568176 POLA1P09884 1462 aaPredicted RBP31■■■□□ 2.55
EDC3-214ENST00000568176 SOGA1O94964 1423 aa30.95■■■□□ 2.54
EDC3-214ENST00000568176 RAD54L2Q9Y4B4 1467 aa30.92■■■□□ 2.54
EDC3-214ENST00000568176 RUSC2Q8N2Y8 1516 aa30.9■■■□□ 2.54
EDC3-214ENST00000568176 FAM9AQ8IZU1 332 aaPredicted RBP30.86■■■□□ 2.53
EDC3-214ENST00000568176 CUX2O14529 1486 aa30.85■■■□□ 2.53
EDC3-214ENST00000568176 TARBP1Q13395 1621 aaKnown RBP30.8■■■□□ 2.52
EDC3-214ENST00000568176 WDR97A6NE52 1622 aa30.77■■■□□ 2.52
EDC3-214ENST00000568176 ABCA10Q8WWZ4 1543 aa30.76■■■□□ 2.52
EDC3-214ENST00000568176 KIF27Q86VH2 1401 aa30.67■■■□□ 2.5
EDC3-214ENST00000568176 IFT140Q96RY7 1462 aa30.67■■■□□ 2.5
EDC3-214ENST00000568176 EEA1Q15075 1411 aa30.66■■■□□ 2.5
EDC3-214ENST00000568176 TDRD9Q8NDG6 1382 aaKnown RBP30.64■■■□□ 2.5
EDC3-214ENST00000568176 ZNF608Q9ULD9 1512 aaPredicted RBP30.61■■■□□ 2.49
EDC3-214ENST00000568176 CSRNP3Q8WYN3 585 aa30.59■■■□□ 2.49
EDC3-214ENST00000568176 ABCA5Q8WWZ7 1642 aa30.59■■■□□ 2.49
EDC3-214ENST00000568176 AQRO60306 1485 aaKnown RBP eCLIP30.54■■■□□ 2.485e-8■■■■□ 24.7
EDC3-214ENST00000568176 LOC105371045A0A1W2PR82 267 aa30.52■■■□□ 2.48
EDC3-214ENST00000568176 GAPVD1Q14C86 1478 aa30.52■■■□□ 2.48
EDC3-214ENST00000568176 IGF1RP08069 1367 aa30.51■■■□□ 2.47
EDC3-214ENST00000568176 EIF4G3O43432 1585 aaKnown RBP30.47■■■□□ 2.47
EDC3-214ENST00000568176 EHMT2Q96KQ7 1210 aa30.47■■■□□ 2.47
EDC3-214ENST00000568176 PBRM1Q86U86 1689 aa30.43■■■□□ 2.46
EDC3-214ENST00000568176 PRXQ9BXM0 1461 aa30.39■■■□□ 2.46
EDC3-214ENST00000568176 ERICH3Q5RHP9 1530 aa30.38■■■□□ 2.45
EDC3-214ENST00000568176 KIF21BO75037 1637 aa30.37■■■□□ 2.45
EDC3-214ENST00000568176 GRIN2BQ13224 1484 aa30.34■■■□□ 2.45
EDC3-214ENST00000568176 RAPGEF2Q9Y4G8 1499 aa30.33■■■□□ 2.45
EDC3-214ENST00000568176 CARMIL1Q5VZK9 1371 aa30.32■■■□□ 2.44
EDC3-214ENST00000568176 CUL7Q14999 1698 aa30.29■■■□□ 2.44
EDC3-214ENST00000568176 GOLGA3Q08378 1498 aa30.26■■■□□ 2.43
EDC3-214ENST00000568176 SNAPC4Q5SXM2 1469 aa30.24■■■□□ 2.43
EDC3-214ENST00000568176 ADAMTS12P58397 1594 aa30.22■■■□□ 2.43
EDC3-214ENST00000568176 FHAD1B1AJZ9 1412 aa30.16■■■□□ 2.42
EDC3-214ENST00000568176 MAGI1Q96QZ7 1491 aaPredicted RBP30.14■■■□□ 2.42
EDC3-214ENST00000568176 UBTFP17480 764 aaKnown RBP30.13■■■□□ 2.41
EDC3-214ENST00000568176 TNIKQ9UKE5 1360 aa30.07■■■□□ 2.4
EDC3-214ENST00000568176 SYNJ2O15056 1496 aa30.04■■■□□ 2.4
EDC3-214ENST00000568176 GRIN2AQ12879 1464 aa30■■■□□ 2.39
EDC3-214ENST00000568176 FBLN2P98095 1184 aa29.96■■■□□ 2.39
EDC3-214ENST00000568176 CHMP7Q8WUX9 453 aaPredicted RBP29.96■■■□□ 2.39
EDC3-214ENST00000568176 CHD1O14646 1710 aa29.93■■■□□ 2.38
EDC3-214ENST00000568176 CTTNBP2Q8WZ74 1663 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms